Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_B06
(358 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF136170-1|AAP97260.1| 63|Homo sapiens cytochrome c oxidase VI... 44 1e-04
X16560-1|CAA34559.1| 63|Homo sapiens protein ( Human COX VIIc ... 42 7e-04
BT007098-1|AAP35762.1| 63|Homo sapiens cytochrome c oxidase su... 42 7e-04
BC007498-1|AAH07498.1| 63|Homo sapiens cytochrome c oxidase su... 42 7e-04
BC001005-1|AAH01005.1| 63|Homo sapiens cytochrome c oxidase su... 42 7e-04
AF067639-1|AAC73062.1| 63|Homo sapiens cytochrome c oxidase su... 42 7e-04
BC002810-1|AAH02810.1| 554|Homo sapiens zinc finger protein 205... 28 7.4
AF060865-1|AAC70007.1| 504|Homo sapiens zinc finger protein ZNF... 28 7.4
BC067748-1|AAH67748.1| 264|Homo sapiens zinc finger protein 524... 28 9.8
BC014666-1|AAH14666.1| 264|Homo sapiens zinc finger protein 524... 28 9.8
BC007396-1|AAH07396.2| 260|Homo sapiens ZNF524 protein protein. 28 9.8
>AF136170-1|AAP97260.1| 63|Homo sapiens cytochrome c oxidase VIIc
protein.
Length = 63
Score = 44.4 bits (100), Expect = 1e-04
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +1
Query: 88 RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLI 234
R T+ VR +H G PG+NLPF + N+++L +Y GSG +AP+ I
Sbjct: 7 RRFTTSVVRRSHYEEG-PGKNLPFSVENKWRLLAMMTVYFGSGFAAPFFI 55
>X16560-1|CAA34559.1| 63|Homo sapiens protein ( Human COX VIIc
gene for subunit VIIc of cytochrome c oxidase (EC
1.9.3.1). ).
Length = 63
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 88 RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLI 234
R T+ VR +H G PG+NLPF + N++ L LY GS + P+L+
Sbjct: 7 RRFTTSVVRRSHYEEG-PGKNLPFSVENKWSLLAKMCLYFGSAFATPFLV 55
>BT007098-1|AAP35762.1| 63|Homo sapiens cytochrome c oxidase
subunit VIIc protein.
Length = 63
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 88 RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLI 234
R T+ VR +H G PG+NLPF + N++ L LY GS + P+L+
Sbjct: 7 RRFTTSVVRRSHYEEG-PGKNLPFSVENKWSLLAKMCLYFGSAFATPFLV 55
>BC007498-1|AAH07498.1| 63|Homo sapiens cytochrome c oxidase
subunit VIIc protein.
Length = 63
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 88 RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLI 234
R T+ VR +H G PG+NLPF + N++ L LY GS + P+L+
Sbjct: 7 RRFTTSVVRRSHYEEG-PGKNLPFSVENKWSLLAKMCLYFGSAFATPFLV 55
>BC001005-1|AAH01005.1| 63|Homo sapiens cytochrome c oxidase
subunit VIIc protein.
Length = 63
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 88 RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLI 234
R T+ VR +H G PG+NLPF + N++ L LY GS + P+L+
Sbjct: 7 RRFTTSVVRRSHYEEG-PGKNLPFSVENKWSLLAKMCLYFGSAFATPFLV 55
>AF067639-1|AAC73062.1| 63|Homo sapiens cytochrome c oxidase
subunit VIIc precursor protein.
Length = 63
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 88 RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLI 234
R T+ VR +H G PG+NLPF + N++ L LY GS + P+L+
Sbjct: 7 RRFTTSVVRRSHYEEG-PGKNLPFSVENKWSLLAKMCLYFGSAFATPFLV 55
>BC002810-1|AAH02810.1| 554|Homo sapiens zinc finger protein 205
protein.
Length = 554
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -1
Query: 175 CNGCECRRVDSRQEYRR*NGFSRNSLPHFCPICLRC 68
C+ C +R R + G + PH CPIC +C
Sbjct: 394 CDRC-AKRFTRRSDLVTHQGTHTGAKPHKCPICAKC 428
>AF060865-1|AAC70007.1| 504|Homo sapiens zinc finger protein ZNF210
protein.
Length = 504
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -1
Query: 175 CNGCECRRVDSRQEYRR*NGFSRNSLPHFCPICLRC 68
C+ C +R R + G + PH CPIC +C
Sbjct: 344 CDRC-AKRFTRRSDLVTHQGTHTGAKPHKCPICAKC 378
>BC067748-1|AAH67748.1| 264|Homo sapiens zinc finger protein 524
protein.
Length = 264
Score = 27.9 bits (59), Expect = 9.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 118 GFSRNSLPHFCPICLR 71
G PHFCP+CLR
Sbjct: 106 GSGPRKAPHFCPVCLR 121
>BC014666-1|AAH14666.1| 264|Homo sapiens zinc finger protein 524
protein.
Length = 264
Score = 27.9 bits (59), Expect = 9.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 118 GFSRNSLPHFCPICLR 71
G PHFCP+CLR
Sbjct: 106 GSGPRKAPHFCPVCLR 121
>BC007396-1|AAH07396.2| 260|Homo sapiens ZNF524 protein protein.
Length = 260
Score = 27.9 bits (59), Expect = 9.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 118 GFSRNSLPHFCPICLR 71
G PHFCP+CLR
Sbjct: 102 GSGPRKAPHFCPVCLR 117
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,297,709
Number of Sequences: 237096
Number of extensions: 722985
Number of successful extensions: 1428
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1428
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2133208582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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