Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_B01
(581 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P83731 Cluster: 60S ribosomal protein L24; n=72; Fungi/... 120 2e-26
UniRef50_Q8JGR4 Cluster: 60S ribosomal protein L24; n=6; Metazoa... 120 3e-26
UniRef50_A7T293 Cluster: Predicted protein; n=7; Nematostella ve... 88 1e-16
UniRef50_Q0ULI2 Cluster: Predicted protein; n=12; Pezizomycotina... 84 2e-15
UniRef50_Q8SY98 Cluster: RH14088p; n=1; Drosophila melanogaster|... 79 1e-13
UniRef50_O01868 Cluster: 60S ribosomal protein L24; n=4; Bilater... 79 1e-13
UniRef50_P24000 Cluster: 60S ribosomal protein L24-B; n=22; Fung... 78 1e-13
UniRef50_Q42347 Cluster: 60S ribosomal protein L24-1; n=22; Viri... 70 5e-11
UniRef50_Q54VN6 Cluster: Ribosomal protein L24; n=1; Dictyosteli... 68 1e-10
UniRef50_UPI000049842E Cluster: 60S ribosomal protein L24; n=2; ... 63 4e-09
UniRef50_Q6A1N0 Cluster: Ribosomal protein L24; n=1; Euplotes va... 60 3e-08
UniRef50_P54064 Cluster: 50S ribosomal protein L24e; n=10; Eurya... 60 4e-08
UniRef50_Q4N0R3 Cluster: 60S ribosomal protein L24, putative; n=... 59 9e-08
UniRef50_UPI000049899D Cluster: 60S ribosomal protein L24; n=3; ... 58 2e-07
UniRef50_UPI00006CCD09 Cluster: Ribosomal protein L24e containin... 57 3e-07
UniRef50_A0CFQ8 Cluster: Chromosome undetermined scaffold_177, w... 57 3e-07
UniRef50_Q9VGN9 Cluster: Probable ribosome biogenesis protein RL... 56 5e-07
UniRef50_Q10353 Cluster: Ribosome biogenesis protein rlp24; n=2;... 56 6e-07
UniRef50_O22165 Cluster: Probable ribosome biogenesis protein RL... 56 8e-07
UniRef50_Q4UCL2 Cluster: 60S ribosomal protein L24/L30, putative... 54 2e-06
UniRef50_Q5CXQ6 Cluster: 60S ribosomal protein L24; n=2; Cryptos... 53 4e-06
UniRef50_Q07915 Cluster: Ribosome biogenesis protein RLP24; n=10... 53 4e-06
UniRef50_Q6CNW3 Cluster: Ribosome biogenesis protein RLP24; n=13... 53 4e-06
UniRef50_Q7RRK8 Cluster: Ribosomal protein L24e, putative; n=5; ... 52 1e-05
UniRef50_Q5CFK2 Cluster: Ribosomal protein L24e; n=2; Cryptospor... 52 1e-05
UniRef50_A2ENX8 Cluster: Ribosomal protein L24e, putative; n=1; ... 52 1e-05
UniRef50_Q3U5N8 Cluster: Bone marrow macrophage cDNA, RIKEN full... 51 2e-05
UniRef50_Q6JWX2 Cluster: 60S ribosomal protein L24; n=2; Deutero... 51 2e-05
UniRef50_Q9UHA3 Cluster: Probable ribosome biogenesis protein RL... 51 2e-05
UniRef50_Q7QRA3 Cluster: GLP_2_13062_12754; n=1; Giardia lamblia... 50 3e-05
UniRef50_O29492 Cluster: 50S ribosomal protein L24e; n=7; cellul... 50 4e-05
UniRef50_Q7R0M0 Cluster: GLP_154_26137_25568; n=1; Giardia lambl... 50 5e-05
UniRef50_A7AR75 Cluster: 60S ribosomal protein L24, putative; n=... 50 5e-05
UniRef50_Q86B05 Cluster: Probable ribosome biogenesis protein RL... 50 5e-05
UniRef50_Q7R991 Cluster: Ribosomal protein L24e, putative; n=3; ... 48 1e-04
UniRef50_Q4XZ61 Cluster: 60S ribosomal protein L24, putative; n=... 48 1e-04
UniRef50_Q4Q1W6 Cluster: Ribosomal protein L24, putative; n=6; T... 48 1e-04
UniRef50_A0DJ05 Cluster: Chromosome undetermined scaffold_52, wh... 47 3e-04
UniRef50_Q4P385 Cluster: Putative uncharacterized protein; n=1; ... 47 3e-04
UniRef50_Q8SSF6 Cluster: Probable ribosome biogenesis protein RL... 47 4e-04
UniRef50_A1CYX3 Cluster: 60S ribosomal protein L24b; n=4; Euroti... 45 0.001
UniRef50_Q8TVE8 Cluster: 50S ribosomal protein L24e; n=5; Archae... 45 0.002
UniRef50_Q8PU76 Cluster: 50S ribosomal protein L24e; n=11; Eurya... 44 0.003
UniRef50_Q17606 Cluster: Probable ribosome biogenesis protein RL... 43 0.005
UniRef50_A6RB37 Cluster: Ribosome biogenesis protein RLP24; n=1;... 43 0.006
UniRef50_A2DJQ1 Cluster: Ribosomal protein L24e, putative; n=1; ... 41 0.019
UniRef50_Q980Q6 Cluster: 50S ribosomal protein L24e; n=6; Thermo... 41 0.025
UniRef50_P14116 Cluster: 50S ribosomal protein L24e; n=6; Haloba... 39 0.075
UniRef50_A3H7X1 Cluster: Ribosomal protein L24E; n=2; Thermoprot... 39 0.099
UniRef50_A2ZTR3 Cluster: Putative uncharacterized protein; n=3; ... 38 0.13
UniRef50_A7DR44 Cluster: Ribosomal protein L24E; n=1; Candidatus... 36 0.92
UniRef50_Q9HJ58 Cluster: 50S ribosomal protein L24e; n=4; Thermo... 36 0.92
UniRef50_A0RUB6 Cluster: Ribosomal protein L24E; n=1; Cenarchaeu... 34 2.1
UniRef50_Q96AX6 Cluster: DENND1B protein; n=2; Homo sapiens|Rep:... 32 8.6
>UniRef50_P83731 Cluster: 60S ribosomal protein L24; n=72;
Fungi/Metazoa group|Rep: 60S ribosomal protein L24 -
Homo sapiens (Human)
Length = 157
Score = 120 bits (290), Expect = 2e-26
Identities = 56/100 (56%), Positives = 66/100 (66%)
Frame = +2
Query: 47 MXLGLCASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFK 226
M + LC+ G KI PGHG+ + DGK F FLN+KCE+A L +RNPR++ WTVLYRRK K
Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHK 60
Query: 227 KGQEEEXXXXXXXXXXXXXXXIVGASLSDIMAKRNMKPEV 346
KGQ EE I GASL+DIMAKRN KPEV
Sbjct: 61 KGQSEEIQKKRTRRAVKFQRAITGASLADIMAKRNQKPEV 100
>UniRef50_Q8JGR4 Cluster: 60S ribosomal protein L24; n=6;
Metazoa|Rep: 60S ribosomal protein L24 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 157
Score = 120 bits (288), Expect = 3e-26
Identities = 55/100 (55%), Positives = 67/100 (67%)
Frame = +2
Query: 47 MXLGLCASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFK 226
M + LC+ G KI PGHG+ +VDGK F FLN+KCE+A L +RNPR++ WTVLYRRK K
Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARVDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHK 60
Query: 227 KGQEEEXXXXXXXXXXXXXXXIVGASLSDIMAKRNMKPEV 346
KGQ EE I GASL++I+AKRN KPEV
Sbjct: 61 KGQSEEVSKKRTRRAVKFQRAITGASLAEILAKRNQKPEV 100
>UniRef50_A7T293 Cluster: Predicted protein; n=7; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 143
Score = 88.2 bits (209), Expect = 1e-16
Identities = 42/74 (56%), Positives = 48/74 (64%)
Frame = +2
Query: 125 KTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXXIVGAS 304
K F FLN +CE A LMRRNPR+VTWTVLYR K KKG +EE + GAS
Sbjct: 7 KVFNFLNKRCERALLMRRNPREVTWTVLYRCKHKKGTQEEVSKKRTRRNIKFQRSVQGAS 66
Query: 305 LSDIMAKRNMKPEV 346
L +I+AKRN KPEV
Sbjct: 67 LDNILAKRNQKPEV 80
>UniRef50_Q0ULI2 Cluster: Predicted protein; n=12;
Pezizomycotina|Rep: Predicted protein - Phaeosphaeria
nodorum (Septoria nodorum)
Length = 161
Score = 84.2 bits (199), Expect = 2e-15
Identities = 41/90 (45%), Positives = 50/90 (55%)
Frame = +2
Query: 74 GSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXX 253
G KI PG GK ++ D K F F N K E+ L R+NPRK++WT LYRR KKG EE
Sbjct: 10 GQKIYPGKGKLYIRGDSKIFRFQNGKTESLFLQRKNPRKISWTTLYRRMHKKGISEEVAK 69
Query: 254 XXXXXXXXXXXXIVGASLSDIMAKRNMKPE 343
IVGASL I +R+ +PE
Sbjct: 70 KRTRRTVKHQRAIVGASLDVIKERRSQRPE 99
>UniRef50_Q8SY98 Cluster: RH14088p; n=1; Drosophila
melanogaster|Rep: RH14088p - Drosophila melanogaster
(Fruit fly)
Length = 123
Score = 78.6 bits (185), Expect = 1e-13
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = +2
Query: 170 MRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXXIVGASLSDIMAKRNMKPEV 346
M+RNPRKVTWTVLYRRK +KG EEE IVGASL++I+AKRNMKPEV
Sbjct: 1 MKRNPRKVTWTVLYRRKHRKGIEEEASKKRTRRTQKFQRAIVGASLAEILAKRNMKPEV 59
>UniRef50_O01868 Cluster: 60S ribosomal protein L24; n=4;
Bilateria|Rep: 60S ribosomal protein L24 -
Caenorhabditis elegans
Length = 159
Score = 78.6 bits (185), Expect = 1e-13
Identities = 42/98 (42%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Frame = +2
Query: 47 MXLGLCASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFK 226
M + C G KI PGHGK +V+ DGK FL+ K +RRNPR + WTVLYR K K
Sbjct: 1 MKVETCVYSGYKIHPGHGKRLVRTDGKVQIFLSGKALKGAKLRRNPRDIRWTVLYRIKNK 60
Query: 227 K---GQEEEXXXXXXXXXXXXXXXIVGASLSDIMAKRN 331
K GQE+ + G SL I+AKRN
Sbjct: 61 KGTHGQEQVTRKKTKKSVQVVNRAVAGLSLDAILAKRN 98
>UniRef50_P24000 Cluster: 60S ribosomal protein L24-B; n=22;
Fungi/Metazoa group|Rep: 60S ribosomal protein L24-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 155
Score = 78.2 bits (184), Expect = 1e-13
Identities = 39/91 (42%), Positives = 50/91 (54%)
Frame = +2
Query: 74 GSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXX 253
G+KI PG G V+ D K F F NSK + R+NPR++ WTVL+R+ KKG EE
Sbjct: 10 GAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRIAWTVLFRKHHKKGITEEVAK 69
Query: 254 XXXXXXXXXXXXIVGASLSDIMAKRNMKPEV 346
I GASL I +R++KPEV
Sbjct: 70 KRSRKTVKAQRPITGASLDLIKERRSLKPEV 100
>UniRef50_Q42347 Cluster: 60S ribosomal protein L24-1; n=22;
Viridiplantae|Rep: 60S ribosomal protein L24-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 164
Score = 69.7 bits (163), Expect = 5e-11
Identities = 37/97 (38%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Frame = +2
Query: 59 LCASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQE 238
LC G KI PG G ++ D + F FLNSKC+ + P K+ WT +YR++ KK
Sbjct: 7 LCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLCWTAMYRKQHKKDAA 66
Query: 239 EEXXXXXXXXXXX-XXXXIVGASLSDIMAKRNMKPEV 346
+E IVGA+L I KR KPEV
Sbjct: 67 QEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEV 103
>UniRef50_Q54VN6 Cluster: Ribosomal protein L24; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L24 -
Dictyostelium discoideum AX4
Length = 127
Score = 68.1 bits (159), Expect = 1e-10
Identities = 36/100 (36%), Positives = 47/100 (47%)
Frame = +2
Query: 47 MXLGLCASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFK 226
M LC KI P G V+ D K F F+N+K E+ + NPR + W+++YRR +K
Sbjct: 1 MKTSLCNYSEFKIYPARGMKFVRGDSKVFHFINTKVESLFFRKINPRDIRWSMVYRRIYK 60
Query: 227 KGQEEEXXXXXXXXXXXXXXXIVGASLSDIMAKRNMKPEV 346
+ IVGASL I KR KPEV
Sbjct: 61 NTTTDVSAKKKARKTKKVERNIVGASLEVIQQKRAQKPEV 100
>UniRef50_UPI000049842E Cluster: 60S ribosomal protein L24; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L24 - Entamoeba histolytica HM-1:IMSS
Length = 163
Score = 63.3 bits (147), Expect = 4e-09
Identities = 29/62 (46%), Positives = 39/62 (62%)
Frame = +2
Query: 59 LCASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQE 238
+CA G KI G+ V++D K+FTF+N K L + NPRKV WT +YR+ KKGQ+
Sbjct: 7 VCAFSGFKIPVAKGRKYVRLDLKSFTFINKKSLMQFLRKTNPRKVFWTAIYRQLNKKGQQ 66
Query: 239 EE 244
E
Sbjct: 67 NE 68
>UniRef50_Q6A1N0 Cluster: Ribosomal protein L24; n=1; Euplotes
vannus|Rep: Ribosomal protein L24 - Euplotes vannus
Length = 155
Score = 60.5 bits (140), Expect = 3e-08
Identities = 30/91 (32%), Positives = 44/91 (48%)
Frame = +2
Query: 59 LCASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQE 238
LC K+ PG G V+ DG+TF FL+ K + H + +TWT ++RRK +KG
Sbjct: 7 LCHFSEYKVYPGRGHRFVRKDGRTFFFLSRKTRSLHFQKVKTSDLTWTPMWRRKNRKGAY 66
Query: 239 EEXXXXXXXXXXXXXXXIVGASLSDIMAKRN 331
+ +VG SL++I RN
Sbjct: 67 AKAARVRTKRTTRKMKAVVGMSLAEINRIRN 97
>UniRef50_P54064 Cluster: 50S ribosomal protein L24e; n=10;
Euryarchaeota|Rep: 50S ribosomal protein L24e -
Methanococcus jannaschii
Length = 70
Score = 60.1 bits (139), Expect = 4e-08
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Frame = +2
Query: 62 CASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLY---RRKFKKG 232
C+ G +I PG GK +V+ DG F +SKCE ++ M RNPRK+ WT +Y + + KK
Sbjct: 7 CSFCGYEIEPGKGKMVVEKDGTVLYFCSSKCEKSYRMGRNPRKLKWTKVYQDMKAELKKA 66
Query: 233 QEEE 244
QE +
Sbjct: 67 QESQ 70
>UniRef50_Q4N0R3 Cluster: 60S ribosomal protein L24, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L24, putative -
Theileria parva
Length = 159
Score = 58.8 bits (136), Expect = 9e-08
Identities = 30/90 (33%), Positives = 42/90 (46%)
Frame = +2
Query: 62 CASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEE 241
C ++ PG GK V DGK + F+N K A H + P K+ W + +R+ KK Q E
Sbjct: 17 CNFTDYRVYPGRGKKFVARDGKVYFFINGKSAAFHKRKVKPAKLKWNLAWRKANKKFQTE 76
Query: 242 EXXXXXXXXXXXXXXXIVGASLSDIMAKRN 331
IVG SL D+ +KR+
Sbjct: 77 LFNRKRSKKTSRPQKAIVGLSLDDLKSKRS 106
>UniRef50_UPI000049899D Cluster: 60S ribosomal protein L24; n=3;
cellular organisms|Rep: 60S ribosomal protein L24 -
Entamoeba histolytica HM-1:IMSS
Length = 179
Score = 57.6 bits (133), Expect = 2e-07
Identities = 26/56 (46%), Positives = 31/56 (55%)
Frame = +2
Query: 47 MXLGLCASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYR 214
M + C G+ I PGHG V+ D K F F SKC + M+RNPRK WT YR
Sbjct: 1 MRIEKCYFCGANIYPGHGMMFVRNDAKVFWFCRSKCHKSFKMKRNPRKFKWTKAYR 56
>UniRef50_UPI00006CCD09 Cluster: Ribosomal protein L24e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein L24e containing protein - Tetrahymena
thermophila SB210
Length = 158
Score = 56.8 bits (131), Expect = 3e-07
Identities = 28/93 (30%), Positives = 45/93 (48%)
Frame = +2
Query: 56 GLCASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQ 235
G C+ +I PG G+ + DG+ F FL K + L + +K+TWT+ RR +KK +
Sbjct: 6 GTCSFCEYRIYPGRGQRFIAKDGRGFFFLTKKAKCLSLRKVKAQKITWTIARRRLWKKVK 65
Query: 236 EEEXXXXXXXXXXXXXXXIVGASLSDIMAKRNM 334
+ IVG SL +I ++N+
Sbjct: 66 ATDIAQKKKKRNVTVARAIVGISLEEINRRKNL 98
>UniRef50_A0CFQ8 Cluster: Chromosome undetermined scaffold_177,
whole genome shotgun sequence; n=7; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_177,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 162
Score = 56.8 bits (131), Expect = 3e-07
Identities = 30/90 (33%), Positives = 44/90 (48%)
Frame = +2
Query: 59 LCASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQE 238
LC+ +I PGHG+ V DG+ F +LN K A + +++ WTV +RR KK +
Sbjct: 7 LCSFSEWRIYPGHGRRFVAKDGRLFYYLNQKSRAFSARKIKSQEIQWTVAWRRLNKKIKT 66
Query: 239 EEXXXXXXXXXXXXXXXIVGASLSDIMAKR 328
+E IVG SL +I +R
Sbjct: 67 DEGAKKRRIRNLKVQRAIVGISLEEIRRRR 96
>UniRef50_Q9VGN9 Cluster: Probable ribosome biogenesis protein
RLP24; n=10; Coelomata|Rep: Probable ribosome biogenesis
protein RLP24 - Drosophila melanogaster (Fruit fly)
Length = 191
Score = 56.4 bits (130), Expect = 5e-07
Identities = 26/57 (45%), Positives = 31/57 (54%)
Frame = +2
Query: 47 MXLGLCASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 217
M + C SKI PGHG V+ D K F F KC A ++NPRKV WT YR+
Sbjct: 1 MRIQTCYFCSSKIYPGHGVQFVRNDCKVFKFCRGKCHKAFKRKKNPRKVGWTKAYRK 57
>UniRef50_Q10353 Cluster: Ribosome biogenesis protein rlp24; n=2;
cellular organisms|Rep: Ribosome biogenesis protein
rlp24 - Schizosaccharomyces pombe (Fission yeast)
Length = 192
Score = 56.0 bits (129), Expect = 6e-07
Identities = 26/61 (42%), Positives = 31/61 (50%)
Frame = +2
Query: 47 MXLGLCASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFK 226
M + C + PGHG V+ D K F F SKC M+RNPRKV WT YR+
Sbjct: 1 MRVHTCYFCSGPVYPGHGIMFVRNDSKVFRFCRSKCHKNFKMKRNPRKVAWTKAYRKAHG 60
Query: 227 K 229
K
Sbjct: 61 K 61
>UniRef50_O22165 Cluster: Probable ribosome biogenesis protein
RLP24; n=3; core eudicotyledons|Rep: Probable ribosome
biogenesis protein RLP24 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 159
Score = 55.6 bits (128), Expect = 8e-07
Identities = 28/66 (42%), Positives = 33/66 (50%)
Frame = +2
Query: 47 MXLGLCASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFK 226
M L C S I PGHG V+ D K F F SKC M+RNPRKV WT +R
Sbjct: 1 MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAFRAAHG 60
Query: 227 KGQEEE 244
K ++
Sbjct: 61 KDMTKD 66
>UniRef50_Q4UCL2 Cluster: 60S ribosomal protein L24/L30, putative;
n=2; Theileria|Rep: 60S ribosomal protein L24/L30,
putative - Theileria annulata
Length = 187
Score = 54.0 bits (124), Expect = 2e-06
Identities = 25/57 (43%), Positives = 29/57 (50%)
Frame = +2
Query: 47 MXLGLCASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 217
M + C S I PGHG V+ D K F F SKC + NPRK+ WT YRR
Sbjct: 1 MNINKCWLCSSNIYPGHGIVFVRNDSKIFRFCRSKCHRHFKAKHNPRKIKWTKAYRR 57
>UniRef50_Q5CXQ6 Cluster: 60S ribosomal protein L24; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L24 -
Cryptosporidium parvum Iowa II
Length = 202
Score = 53.2 bits (122), Expect = 4e-06
Identities = 25/57 (43%), Positives = 29/57 (50%)
Frame = +2
Query: 47 MXLGLCASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 217
M + C S I PGHG V+ D K F F SKC M+ NPRK WT YR+
Sbjct: 6 MRIEKCWYCSSNIYPGHGVTFVRNDAKIFRFCRSKCHRHFKMKHNPRKSKWTKAYRK 62
>UniRef50_Q07915 Cluster: Ribosome biogenesis protein RLP24; n=10;
Ascomycota|Rep: Ribosome biogenesis protein RLP24 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 199
Score = 53.2 bits (122), Expect = 4e-06
Identities = 25/57 (43%), Positives = 30/57 (52%)
Frame = +2
Query: 47 MXLGLCASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 217
M + C S PGHG V+ D K F F SKC A RRNPRK+ WT +R+
Sbjct: 1 MRIYQCHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFRK 57
>UniRef50_Q6CNW3 Cluster: Ribosome biogenesis protein RLP24; n=13;
Ascomycota|Rep: Ribosome biogenesis protein RLP24 -
Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 198
Score = 53.2 bits (122), Expect = 4e-06
Identities = 25/57 (43%), Positives = 30/57 (52%)
Frame = +2
Query: 47 MXLGLCASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 217
M + C S PGHG V+ D K F F SKC A RRNPRK+ WT +R+
Sbjct: 1 MRVYACHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLRWTKAFRK 57
>UniRef50_Q7RRK8 Cluster: Ribosomal protein L24e, putative; n=5;
Plasmodium|Rep: Ribosomal protein L24e, putative -
Plasmodium yoelii yoelii
Length = 213
Score = 52.0 bits (119), Expect = 1e-05
Identities = 23/61 (37%), Positives = 31/61 (50%)
Frame = +2
Query: 47 MXLGLCASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFK 226
M + C I PGHG ++ D + F F SKC + NPRKV WT +YR++
Sbjct: 1 MRIEKCWYCSGNIYPGHGIHFIRNDARVFRFCRSKCHKHFKAKHNPRKVKWTKIYRKERN 60
Query: 227 K 229
K
Sbjct: 61 K 61
>UniRef50_Q5CFK2 Cluster: Ribosomal protein L24e; n=2;
Cryptosporidium|Rep: Ribosomal protein L24e -
Cryptosporidium hominis
Length = 133
Score = 52.0 bits (119), Expect = 1e-05
Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +2
Query: 59 LCASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK-GQ 235
LC+ +I PG G+ V DG+ TFLN KC + + P K+ W+V +RR KK
Sbjct: 12 LCSYSEYRIYPGRGRKFVARDGRVSTFLNQKCASLFHQKIRPVKLKWSVGWRRMNKKLTN 71
Query: 236 EEEXXXXXXXXXXXXXXXIVGASLSDIMAKR 328
+ I G SL DI KR
Sbjct: 72 QGATSKRRNKKTVRLHKAIEGLSLDDIKQKR 102
>UniRef50_A2ENX8 Cluster: Ribosomal protein L24e, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24e,
putative - Trichomonas vaginalis G3
Length = 178
Score = 51.6 bits (118), Expect = 1e-05
Identities = 23/56 (41%), Positives = 30/56 (53%)
Frame = +2
Query: 62 CASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 229
C+ G I PGHG V+ D K F F SKC + ++NPRK +WT +R K
Sbjct: 7 CSFCGGPIWPGHGTVYVRNDCKVFRFCKSKCRKFWMKKKNPRKFSWTKAFRAAMGK 62
>UniRef50_Q3U5N8 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830167A21
product:Similar to 60S ribosomal protein L30 isolog,
full insert sequence; n=3; Murinae|Rep: Bone marrow
macrophage cDNA, RIKEN full-length enriched library,
clone:I830167A21 product:Similar to 60S ribosomal
protein L30 isolog, full insert sequence - Mus musculus
(Mouse)
Length = 171
Score = 51.2 bits (117), Expect = 2e-05
Identities = 24/57 (42%), Positives = 29/57 (50%)
Frame = +2
Query: 47 MXLGLCASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 217
M + C I PGHG V+ D K F F SKC +RNPRKV WT +R+
Sbjct: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57
>UniRef50_Q6JWX2 Cluster: 60S ribosomal protein L24; n=2;
Deuterostomia|Rep: 60S ribosomal protein L24 -
Oikopleura dioica (Tunicate)
Length = 165
Score = 51.2 bits (117), Expect = 2e-05
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +2
Query: 47 MXLGLCASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFK 226
M + C + + PGHG V+ D K F F +KC ++NPRK+ WT YR+
Sbjct: 1 MRVEKCYFCSAPVYPGHGTVFVRNDSKQFRFCTAKCNKMFKKKKNPRKIKWTKAYRKAHG 60
Query: 227 K 229
K
Sbjct: 61 K 61
>UniRef50_Q9UHA3 Cluster: Probable ribosome biogenesis protein
RLP24; n=35; Euteleostomi|Rep: Probable ribosome
biogenesis protein RLP24 - Homo sapiens (Human)
Length = 163
Score = 51.2 bits (117), Expect = 2e-05
Identities = 24/57 (42%), Positives = 29/57 (50%)
Frame = +2
Query: 47 MXLGLCASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 217
M + C I PGHG V+ D K F F SKC +RNPRKV WT +R+
Sbjct: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57
>UniRef50_Q7QRA3 Cluster: GLP_2_13062_12754; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_2_13062_12754 - Giardia lamblia ATCC
50803
Length = 102
Score = 50.4 bits (115), Expect = 3e-05
Identities = 23/52 (44%), Positives = 30/52 (57%)
Frame = +2
Query: 62 CASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 217
C+ G KI PG+GK M + D FLN K +L + NPRK+ WT+ RR
Sbjct: 7 CSYSGRKILPGYGKRMSRHDKVLLIFLNRKASVHYLNKWNPRKIRWTLASRR 58
>UniRef50_O29492 Cluster: 50S ribosomal protein L24e; n=7; cellular
organisms|Rep: 50S ribosomal protein L24e -
Archaeoglobus fulgidus
Length = 58
Score = 50.0 bits (114), Expect = 4e-05
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +2
Query: 59 LCASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHL-MRRNPRKVTWTVLYRR 217
+C+ G I PG GK V+ DG+ F F + KCE L ++R PRK+ WT Y R
Sbjct: 5 VCSFCGYDIEPGTGKMYVRRDGRVFYFCSGKCEKNMLKLKRKPRKLKWTKHYSR 58
>UniRef50_Q7R0M0 Cluster: GLP_154_26137_25568; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_154_26137_25568 - Giardia lamblia
ATCC 50803
Length = 189
Score = 49.6 bits (113), Expect = 5e-05
Identities = 22/51 (43%), Positives = 27/51 (52%)
Frame = +2
Query: 62 CASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYR 214
C+ + PG G V+ D + F F SKC M+RNPRKV WT YR
Sbjct: 7 CSFCSKPVYPGKGICFVRNDSRVFRFCTSKCHRNFKMKRNPRKVRWTKTYR 57
>UniRef50_A7AR75 Cluster: 60S ribosomal protein L24, putative; n=1;
Babesia bovis|Rep: 60S ribosomal protein L24, putative -
Babesia bovis
Length = 192
Score = 49.6 bits (113), Expect = 5e-05
Identities = 25/61 (40%), Positives = 29/61 (47%)
Frame = +2
Query: 47 MXLGLCASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFK 226
M + C S I PGHG V+ D K F F SKC + NPRK+ WT RR
Sbjct: 1 MRIDKCWLCSSNIYPGHGIVFVRNDSKIFRFCRSKCHKHFKAKHNPRKLKWTKAARRMHG 60
Query: 227 K 229
K
Sbjct: 61 K 61
>UniRef50_Q86B05 Cluster: Probable ribosome biogenesis protein
RLP24; n=2; Eukaryota|Rep: Probable ribosome biogenesis
protein RLP24 - Dictyostelium discoideum (Slime mold)
Length = 164
Score = 49.6 bits (113), Expect = 5e-05
Identities = 22/57 (38%), Positives = 29/57 (50%)
Frame = +2
Query: 47 MXLGLCASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 217
M + C + PGHG V+ D K F F SKC ++RNPRK WT +R+
Sbjct: 1 MRIEKCYFCSGPVYPGHGVMFVRNDCKQFRFCRSKCHKNFKLKRNPRKTRWTKAFRK 57
>UniRef50_Q7R991 Cluster: Ribosomal protein L24e, putative; n=3;
Plasmodium|Rep: Ribosomal protein L24e, putative -
Plasmodium yoelii yoelii
Length = 178
Score = 48.4 bits (110), Expect = 1e-04
Identities = 24/89 (26%), Positives = 41/89 (46%)
Frame = +2
Query: 62 CASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEE 241
C+ +I PG G+ + DGK + +L+SK + L ++ K+ WT +RR KK + E
Sbjct: 13 CSFSEYRIYPGRGQKYIAKDGKVYFYLSSKFASLALQKKKAAKLRWTQTWRRNNKKTKVE 72
Query: 242 EXXXXXXXXXXXXXXXIVGASLSDIMAKR 328
+ G S+ DI ++
Sbjct: 73 ATQRRRYKKTIKVQKAVCGLSVEDIRNRK 101
>UniRef50_Q4XZ61 Cluster: 60S ribosomal protein L24, putative; n=2;
Plasmodium (Vinckeia)|Rep: 60S ribosomal protein L24,
putative - Plasmodium chabaudi
Length = 130
Score = 48.4 bits (110), Expect = 1e-04
Identities = 24/89 (26%), Positives = 41/89 (46%)
Frame = +2
Query: 62 CASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEE 241
C+ +I PG G+ + DGK + +L+SK + L ++ K+ WT +RR KK + E
Sbjct: 13 CSFSEYRIYPGRGQKYIAKDGKVYFYLSSKFASLALQKKKAAKLRWTQTWRRNNKKTKVE 72
Query: 242 EXXXXXXXXXXXXXXXIVGASLSDIMAKR 328
+ G S+ DI ++
Sbjct: 73 ATQRRRYKKTIKVQKAVCGLSVEDIRNRK 101
>UniRef50_Q4Q1W6 Cluster: Ribosomal protein L24, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein L24, putative -
Leishmania major
Length = 124
Score = 48.4 bits (110), Expect = 1e-04
Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
Frame = +2
Query: 83 ISPGHGK---PMVKVDGK-TFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXX 250
+ PGHG+ P + K TF KC A ++ ++NPR + WT YRR +K +
Sbjct: 13 VHPGHGRRYVPFAFLSTKPVLTFSRPKCFALYMRKKNPRFIPWTRTYRRIHRKTTTDRVN 72
Query: 251 XXXXXXXXXXXXXIVGASLSDIMAKRNMKPE 343
IVGA LS I R + E
Sbjct: 73 RRRAARAVRVQRAIVGADLSYIQEVRAARKE 103
>UniRef50_A0DJ05 Cluster: Chromosome undetermined scaffold_52, whole
genome shotgun sequence; n=4; Eukaryota|Rep: Chromosome
undetermined scaffold_52, whole genome shotgun sequence
- Paramecium tetraurelia
Length = 171
Score = 47.2 bits (107), Expect = 3e-04
Identities = 22/57 (38%), Positives = 27/57 (47%)
Frame = +2
Query: 47 MXLGLCASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 217
M + C I PGHG V+ D K F F SKC + NPRK WT +R+
Sbjct: 1 MRIEKCYFCSGPIYPGHGIVFVRNDSKMFRFCRSKCHRHFKAQHNPRKTRWTKAFRK 57
>UniRef50_Q4P385 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 181
Score = 47.2 bits (107), Expect = 3e-04
Identities = 20/43 (46%), Positives = 25/43 (58%)
Frame = +2
Query: 89 PGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 217
PG G V+ D K F F SKC ++RNPRKV WT +R+
Sbjct: 15 PGKGITFVRNDAKIFKFCKSKCHKNFKLKRNPRKVRWTKAFRK 57
>UniRef50_Q8SSF6 Cluster: Probable ribosome biogenesis protein
RLP24; n=1; Encephalitozoon cuniculi|Rep: Probable
ribosome biogenesis protein RLP24 - Encephalitozoon
cuniculi
Length = 155
Score = 46.8 bits (106), Expect = 4e-04
Identities = 24/61 (39%), Positives = 28/61 (45%)
Frame = +2
Query: 47 MXLGLCASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFK 226
M + C S I GHG V+ D K F F KC R NPRKV WT + R+
Sbjct: 1 MRIEKCWFCSSNIYQGHGTIYVRNDAKVFRFCRPKCRKLFARRVNPRKVKWTKISRKMAN 60
Query: 227 K 229
K
Sbjct: 61 K 61
>UniRef50_A1CYX3 Cluster: 60S ribosomal protein L24b; n=4;
Eurotiomycetidae|Rep: 60S ribosomal protein L24b -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 188
Score = 45.2 bits (102), Expect = 0.001
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +2
Query: 47 MXLGLCASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYR 214
M + C + P G V+ D K+F F SKC A M+R PRK+ WT +R
Sbjct: 1 MRVETCHFCSRPVYPSKGITFVRNDAKSFRFCRSKCHANFKMKRQPRKLKWTKTHR 56
>UniRef50_Q8TVE8 Cluster: 50S ribosomal protein L24e; n=5;
Archaea|Rep: 50S ribosomal protein L24e - Methanopyrus
kandleri
Length = 68
Score = 44.8 bits (101), Expect = 0.002
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 62 CASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHL-MRRNPRKVTWTVLYR 214
C G I PG GK VK DG F +SKCE L + R+P+KV WT +R
Sbjct: 7 CDFCGRIIEPGTGKMFVKNDGTILWFCSSKCERNMLKLGRDPKKVRWTEKHR 58
>UniRef50_Q8PU76 Cluster: 50S ribosomal protein L24e; n=11;
Euryarchaeota|Rep: 50S ribosomal protein L24e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 62
Score = 43.6 bits (98), Expect = 0.003
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +2
Query: 62 CASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 229
C G + PG GK +K DG T+ +SKC + + R PR+ WT + + KK
Sbjct: 6 CYFCGQMLEPGTGKLYIKKDGSTYFMCSSKCMSNFALGRLPRRTEWTEKGKIQLKK 61
>UniRef50_Q17606 Cluster: Probable ribosome biogenesis protein
RLP24; n=2; Caenorhabditis|Rep: Probable ribosome
biogenesis protein RLP24 - Caenorhabditis elegans
Length = 162
Score = 43.2 bits (97), Expect = 0.005
Identities = 21/57 (36%), Positives = 28/57 (49%)
Frame = +2
Query: 47 MXLGLCASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 217
M + C S I PGHG V+ D F F S+C ++NPRK+ +T RR
Sbjct: 1 MRIEKCYFCSSPIYPGHGIQFVRNDSTVFKFCRSRCNKLFKKKKNPRKLRFTKAARR 57
>UniRef50_A6RB37 Cluster: Ribosome biogenesis protein RLP24; n=1;
Ajellomyces capsulatus NAm1|Rep: Ribosome biogenesis
protein RLP24 - Ajellomyces capsulatus NAm1
Length = 191
Score = 42.7 bits (96), Expect = 0.006
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = +2
Query: 47 MXLGLCASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYR 214
M + C P G V+ D +TF F SKC M+R PRK+ WT +R
Sbjct: 1 MRIETCHFCSQPCYPSKGITFVRNDARTFRFCRSKCHKNFKMKRQPRKLKWTKTHR 56
>UniRef50_A2DJQ1 Cluster: Ribosomal protein L24e, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24e,
putative - Trichomonas vaginalis G3
Length = 113
Score = 41.1 bits (92), Expect = 0.019
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +2
Query: 59 LCASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 229
+C G GHG+ ++ D F + K +RNPRK+ WT YR KK
Sbjct: 7 ICGFSGHIFHAGHGRVHIREDKHLMAFESRKAFRMWERKRNPRKIAWTEHYRHDHKK 63
>UniRef50_Q980Q6 Cluster: 50S ribosomal protein L24e; n=6;
Thermoprotei|Rep: 50S ribosomal protein L24e -
Sulfolobus solfataricus
Length = 61
Score = 40.7 bits (91), Expect = 0.025
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 62 CASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHL-MRRNPRKVTWTVLYRR 217
C+ G +I PG G V+ DG F +SKC + L R+P+K WT Y +
Sbjct: 7 CSFCGHEIPPGTGLMYVRNDGTILWFCSSKCRKSMLKYHRDPKKYKWTTRYMK 59
>UniRef50_P14116 Cluster: 50S ribosomal protein L24e; n=6;
Halobacteriaceae|Rep: 50S ribosomal protein L24e -
Haloarcula marismortui (Halobacterium marismortui)
Length = 67
Score = 39.1 bits (87), Expect = 0.075
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = +2
Query: 62 CASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEE 241
C G+ I PG G V DG T F +SKCE + R R + WT R + + ++E
Sbjct: 7 CDYCGTDIEPGTGTMFVHKDGATTHFCSSKCENNADLGREARNLEWTDTARGEAGEAEDE 66
>UniRef50_A3H7X1 Cluster: Ribosomal protein L24E; n=2;
Thermoproteaceae|Rep: Ribosomal protein L24E -
Caldivirga maquilingensis IC-167
Length = 70
Score = 38.7 bits (86), Expect = 0.099
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 62 CASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHL-MRRNPRKVTWTVLYRRKFKKGQE 238
C+ G I PG+G V+VDG F + +C + + M +NP+K W RR Q
Sbjct: 6 CSYCGRPIPPGYGIMYVRVDGVVLRFCSRRCFVSMVKMGKNPQKQAWVRKIRRAKSAAQS 65
Query: 239 E 241
+
Sbjct: 66 K 66
>UniRef50_A2ZTR3 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 202
Score = 38.3 bits (85), Expect = 0.13
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +2
Query: 131 FTFLNSKCEAAHLMRRNPRKVTWTVLYR 214
F F SKC M+RNPRKV WT YR
Sbjct: 67 FRFCRSKCHKNFKMKRNPRKVKWTKAYR 94
>UniRef50_A7DR44 Cluster: Ribosomal protein L24E; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L24E - Candidatus Nitrosopumilus maritimus SCM1
Length = 66
Score = 35.5 bits (78), Expect = 0.92
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2
Query: 83 ISPGHGKPMVKVDGKTFTFLNSKCEAAHL-MRRNPRKVTWTVLY 211
++ G G + K DG F ++KC+ L ++R+PRK WT Y
Sbjct: 15 VAKGSGTMLAKNDGTVLWFCSAKCKKNALELKRDPRKFKWTKKY 58
>UniRef50_Q9HJ58 Cluster: 50S ribosomal protein L24e; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L24e -
Thermoplasma acidophilum
Length = 67
Score = 35.5 bits (78), Expect = 0.92
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 62 CASRGSKISPGHGKPMVKVDGKTFTFLNSKCEAAHL-MRRNPRKVTWTVLY 211
C+ G I PG G V+ DG F ++KC + + R PR V WT Y
Sbjct: 7 CSFCGKAIEPGTGIMYVRKDGAILYFCSNKCRKNMIELNRVPRYVKWTNEY 57
>UniRef50_A0RUB6 Cluster: Ribosomal protein L24E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L24E - Cenarchaeum
symbiosum
Length = 65
Score = 34.3 bits (75), Expect = 2.1
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 83 ISPGHGKPMVKVDGKTFTFLNSKCEA-AHLMRRNPRKVTWTVLY 211
++ G G K DG F +SKC +++R+PRK WT Y
Sbjct: 15 VAKGSGTMFAKNDGTVMWFCSSKCRKNMTVLKRDPRKFKWTGKY 58
>UniRef50_Q96AX6 Cluster: DENND1B protein; n=2; Homo sapiens|Rep:
DENND1B protein - Homo sapiens (Human)
Length = 166
Score = 32.3 bits (70), Expect = 8.6
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 208 QDSPCYFTRIPPHQMGGFTF*IQECEGFSI 119
+DSP Y RIPP ++ F F I++ E F +
Sbjct: 118 EDSPAYLPRIPPGKVRRFAFCIKKLENFPV 147
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 433,165,576
Number of Sequences: 1657284
Number of extensions: 7910212
Number of successful extensions: 16793
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 16483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16788
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40404161459
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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