Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_A21
(760 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_1036 + 8134132-8134539,8134885-8134956,8134969-8135088,813... 32 0.43
11_06_0710 - 26492093-26493460 30 1.7
04_04_1553 - 34363848-34366058,34369087-34370451 30 1.7
03_06_0448 - 34005581-34005655,34005735-34005830,34006669-340076... 30 1.7
10_08_0043 - 14390398-14391531,14391850-14393691,14393800-143968... 30 2.3
03_06_0449 - 34013973-34014056,34014595-34014630,34014729-340148... 30 2.3
09_02_0496 - 9892242-9892499,9892956-9893045,9893046-9893094,989... 29 3.0
12_01_0391 - 3086802-3087292,3089198-3089322,3089421-3089633,308... 29 4.0
05_03_0033 - 7585267-7586028 29 4.0
09_06_0082 + 20749425-20749589,20750137-20750238,20750320-207503... 29 5.3
12_01_0830 - 7678038-7678444,7678996-7680943,7681231-7681983,768... 28 7.0
09_06_0113 + 20938357-20938730,20938820-20939057,20939140-209392... 28 7.0
07_01_0463 + 3502708-3503535 28 7.0
01_06_1745 - 39609894-39610030,39610127-39610223,39613856-396139... 28 7.0
08_01_0871 + 8502396-8502417,8503606-8503732,8503891-8503990,850... 28 9.3
05_03_0035 - 7592177-7592938 28 9.3
>06_01_1036 + 8134132-8134539,8134885-8134956,8134969-8135088,
8135179-8135256,8135442-8135697,8136427-8136515,
8137229-8137376,8137460-8137899,8138048-8138562,
8138791-8139061,8139231-8139492,8139583-8139938
Length = 1004
Score = 32.3 bits (70), Expect = 0.43
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 428 PTKRKRIRLNPVDSDDSDVENKADNKIGTT 517
P R+R R +P SDDSD++ + DN T+
Sbjct: 915 PPSRRRARRSPSSSDDSDIDGQEDNLHATS 944
>11_06_0710 - 26492093-26493460
Length = 455
Score = 30.3 bits (65), Expect = 1.7
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 12/94 (12%)
Frame = +2
Query: 248 KTPPTNKKLKADATEDTDCNGSPKSSKKGIHLEN----KKRERQITPSPE--------LK 391
K KK K+ +++D D + KS KK + ++ KK+ ++ +P+ K
Sbjct: 136 KKKKKKKKSKSKSSDDDDDDAEKKSKKKSKNSDDDEDDKKKSKKKPKNPDDDEDDKKKSK 195
Query: 392 KASSDEEEVISLPTKRKRIRLNPVDSDDSDVENK 493
K SSDE+ + K+K+ + D +D + K
Sbjct: 196 KKSSDEDNDGAKKKKKKKSKGKSSDEEDDEKPKK 229
>04_04_1553 - 34363848-34366058,34369087-34370451
Length = 1191
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 176 HIKIIKMSKRNSTGAANTLFN-YFTKTPPTNKKLKADATEDTD 301
H ++IK NS NTL N YFT P + ++ D+ D
Sbjct: 351 HAEVIKAGLENSVFVGNTLLNMYFTNDDPHSARILFDSITQED 393
>03_06_0448 - 34005581-34005655,34005735-34005830,34006669-34007616,
34007684-34007851,34007908-34008099,34008164-34008346,
34008414-34008590,34008667-34012074
Length = 1748
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Frame = +2
Query: 257 PTNKKLKADATEDTDCNGSPKSSKKGIHLENKKRERQITPSPELK---KASSDEEEVISL 427
P + K+DA +PK S++ I E++ RE + + E K + +EV
Sbjct: 1443 PWEDQNKSDAEVSESNQTAPKESERTIPPEHEDREEEKEENMENKIEISIGRENDEVSEQ 1502
Query: 428 PTKRKRIRLNPVDSDDSDVENK 493
T + + P DD D NK
Sbjct: 1503 ETSTEECIVAPSGMDDRDENNK 1524
>10_08_0043 -
14390398-14391531,14391850-14393691,14393800-14396825,
14397510-14397609
Length = 2033
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/44 (27%), Positives = 26/44 (59%)
Frame = +2
Query: 359 ERQITPSPELKKASSDEEEVISLPTKRKRIRLNPVDSDDSDVEN 490
E + L S +E ++L TK+ +++L+ V++ ++D+EN
Sbjct: 757 EAALLAMTNLNSESQEEVNRLTLETKKLKVKLSEVENSNTDLEN 800
>03_06_0449 -
34013973-34014056,34014595-34014630,34014729-34014816,
34015034-34015143,34015611-34015715,34015812-34015903,
34016145-34016232,34016407-34016526,34016603-34016721,
34017253-34018126
Length = 571
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Frame = +2
Query: 266 KKLKADATEDTDCNGSPKSSKKGIHLENKKRERQIT----PSPELKKAS----SDEEEVI 421
K+ DA D S KS G + K R R+ +++ A+ SD EE +
Sbjct: 204 KEAATDANLDDHGAESKKSDDSGQIADEKPRPRRTRVLDKTGKKIRVANKDPVSDIEETL 263
Query: 422 SLPTKRKRIRLNPVDSDDSDVEN 490
P KRKR++L+P D+ + +E+
Sbjct: 264 P-PKKRKRMKLDPYDTSNKRLED 285
>09_02_0496 -
9892242-9892499,9892956-9893045,9893046-9893094,
9893330-9893557,9894095-9894261,9894312-9894395,
9894614-9894820,9894919-9895251,9895371-9895513,
9895607-9895723,9895824-9895980,9896054-9896157,
9896272-9896432,9896518-9896707,9896732-9896834,
9896950-9897231,9897327-9897649,9897750-9897786,
9898109-9898162,9898292-9898368,9898449-9898502,
9898738-9898822,9900289-9900426,9900592-9900603
Length = 1150
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Frame = +2
Query: 257 PTNKKLKADATEDTDCNGSPKSSKKGIHLENKKRERQITPSPE----LKKASSDEEE 415
P N+K++ C G + L ++ E ITP PE LK A++ EE+
Sbjct: 74 PINRKIRETINFSAKCQGVGHHYDLFLELLRREEEENITPDPETDIYLKAATTGEEK 130
>12_01_0391 -
3086802-3087292,3089198-3089322,3089421-3089633,
3089726-3090711
Length = 604
Score = 29.1 bits (62), Expect = 4.0
Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Frame = +2
Query: 260 TNKKLKADATEDTDCNGSPKSSKKGIHLENKKRERQITPSPELKKASSDE-EEVISL-PT 433
+ K LK D T C K + KG + N + P KK DE E+ +L PT
Sbjct: 219 STKSLKRDYIPST-CGDHYKDNTKGNEVPNPSPLTKDGP----KKHDRDECEDYKNLRPT 273
Query: 434 K-RKRIRLNPVDSDDSDVENKADNKIGT 514
K R+R +N + DD D +N D K T
Sbjct: 274 KKRRRYIVNVDEEDDYDDKNPMDIKDST 301
>05_03_0033 - 7585267-7586028
Length = 253
Score = 29.1 bits (62), Expect = 4.0
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 10/94 (10%)
Frame = +2
Query: 254 PPTNKKLKADATEDTDCNGSPKSS---KKGIHLENK---KRERQITPSPELK--KASSDE 409
P + + KA++T + PKS K ++ E K K E Q P+PE K S +
Sbjct: 113 PESKPEPKAESTPQPEAKSEPKSEPKPKSELYAEPKSEPKSEPQSEPNPETKAEPKSEPK 172
Query: 410 EEVISLPTKR--KRIRLNPVDSDDSDVENKADNK 505
E S PT + + P + E+KA+ K
Sbjct: 173 SEPKSEPTPQTEPKAESQPEPKTEPKSESKAEPK 206
>09_06_0082 +
20749425-20749589,20750137-20750238,20750320-20750384,
20750471-20750588,20750937-20751012,20751304-20751365,
20751457-20751588,20751686-20751739,20751969-20752034,
20752115-20752189,20752271-20752321
Length = 321
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/58 (27%), Positives = 32/58 (55%)
Frame = +2
Query: 326 KKGIHLENKKRERQITPSPELKKASSDEEEVISLPTKRKRIRLNPVDSDDSDVENKAD 499
+K +++ K E + +L+K +EEE+ K++R+R +P S ++EN +D
Sbjct: 88 EKRVNIRTKIEEEE---KEKLQKLQQEEEELQMQKRKKRRVRGDPRLSFCDEIENGSD 142
>12_01_0830 -
7678038-7678444,7678996-7680943,7681231-7681983,
7682701-7682824,7683590-7683723
Length = 1121
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +2
Query: 254 PPTNKKLKADATEDTDCNGSPKSSKKGIHLENKKRERQITPSPELKKASSDEEE 415
PP + +D GSP SS G+++ ++ R + ++P+P + SS E
Sbjct: 210 PPNLRTSMSDRPLSRSRGGSP-SSFSGLNMVSRGRRQSMSPTPSRRTISSHSTE 262
>09_06_0113 +
20938357-20938730,20938820-20939057,20939140-20939264,
20939682-20939715,20939804-20939850,20939948-20940079,
20940420-20940484,20940613-20940685,20940790-20940946
Length = 414
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +2
Query: 305 NGS--PKSSKKGIHLENKKRERQITPSPELKKASSDEEEVISLPTKRKRIRLNPVDSDD 475
NGS P++S+ + + + P P L+K D +++ +K I L+ V SDD
Sbjct: 348 NGSTNPQTSRFSSNKRSTSCSTKSMPKPGLQKQEQDNKKMKMTCPPKKTIELDDVSSDD 406
>07_01_0463 + 3502708-3503535
Length = 275
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +2
Query: 215 GAANTLFNYFTKTPPTNKKLKADATEDTDCNGSPKSSKKGIHLENKKRERQITPSPELKK 394
GA + + + +K NKK +D +D + + KK ++ KK+++ KK
Sbjct: 69 GAKSAVKSKDSKKDKENKK--SDKKDDEHDDEDEEGKKKEKEMKEKKKDKSDKKEEGKKK 126
Query: 395 ASSDEEE 415
DEEE
Sbjct: 127 KDGDEEE 133
>01_06_1745 -
39609894-39610030,39610127-39610223,39613856-39613996,
39614094-39614272,39615067-39615111,39615802-39615858,
39615935-39616163,39616348-39616418,39619527-39619635
Length = 354
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +2
Query: 281 DATEDTDCNGSPKSSKKGIHLENKKRERQITPSPELKKASSDEEEVISLPTKRK 442
D+++D D G ++ E + + + TP+ E SSDEEE + TK +
Sbjct: 231 DSSDDADYEGKSSDEEETTAKEGESTDEKETPAKE--GESSDEEETPAKNTKEE 282
>08_01_0871 + 8502396-8502417,8503606-8503732,8503891-8503990,
8504725-8504793,8504870-8505043,8505196-8505373,
8505462-8505594,8505702-8505864,8507031-8507181,
8507266-8507366,8507633-8507788,8508105-8508173,
8508256-8508324,8508403-8508540,8508639-8508767,
8509013-8509053,8510019-8510106,8510199-8510339,
8510428-8510553,8510671-8510736,8510994-8511291,
8511387-8511595,8511689-8511802
Length = 953
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/82 (21%), Positives = 32/82 (39%)
Frame = +2
Query: 254 PPTNKKLKADATEDTDCNGSPKSSKKGIHLENKKRERQITPSPELKKASSDEEEVISLPT 433
PP KKL + + KSS + R + + EL+K +E+ + T
Sbjct: 807 PPVVKKLYPKSATPDSSSAPSKSSATASLTGSFDRPKSVKDGSELEKPKQEEDAKEGINT 866
Query: 434 KRKRIRLNPVDSDDSDVENKAD 499
R+ ++ D + E + D
Sbjct: 867 MTSRVESLTINEDVKENEPEDD 888
>05_03_0035 - 7592177-7592938
Length = 253
Score = 27.9 bits (59), Expect = 9.3
Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 10/94 (10%)
Frame = +2
Query: 254 PPTNKKLKADATEDTDCNGSPKSS---KKGIHLENK---KRERQITPSPELKKASSDEE- 412
P + + KA++T + PKS K + E K K E Q P+PE K E
Sbjct: 113 PESKPEPKAESTPQPEAKSEPKSEPKPKSEPYAEPKSEPKSEPQSEPNPETKAEPKSEPK 172
Query: 413 -EVISLPTKR--KRIRLNPVDSDDSDVENKADNK 505
E S PT + R P + E+KA+ K
Sbjct: 173 YEPKSEPTPQTEPRAESQPEPKTEPKSESKAEPK 206
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,945,763
Number of Sequences: 37544
Number of extensions: 195493
Number of successful extensions: 746
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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