Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_A21
         (760 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              24   1.3  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      22   5.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   7.2  

>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +3

Query: 576 NFKTVLNMNQIKPQKVTRILKLQLDQN 656
           NF  +   N  KPQ +  +++L +D+N
Sbjct: 69  NFNILDKNNVFKPQGIKAVMELLIDEN 95


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 13/54 (24%), Positives = 27/54 (50%)
 Frame = +2

Query: 338 HLENKKRERQITPSPELKKASSDEEEVISLPTKRKRIRLNPVDSDDSDVENKAD 499
           H  ++++   +TPSP++   SS  EE+    + +    ++ V+     +E K D
Sbjct: 131 HSRDQEQNLYLTPSPQM--YSSGGEEITPRQSHQSYHHMDSVEYKPEIMEYKPD 182


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +2

Query: 314  PKSSKKGIHLENKKRERQITPSPELKKASSDEE 412
            P+S +    ++   R  + TP P L + SS++E
Sbjct: 1320 PESMRSKALIDQLCRNSRRTPVPRLAQDSSEDE 1352


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,129
Number of Sequences: 438
Number of extensions: 2597
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)