Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_A19
         (827 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0499 - 19725896-19726339,19726918-19726960,19727286-197273...    30   2.0  
02_05_0424 + 28841562-28841569,28841636-28841714,28841826-288418...    29   3.4  
02_03_0180 - 16031366-16031445,16031950-16032022,16032148-160321...    29   4.5  
11_06_0766 - 27115441-27115760,27115878-27116025,27116213-271174...    28   7.9  
02_01_0344 + 2467191-2468282                                           28   7.9  

>12_02_0499 -
           19725896-19726339,19726918-19726960,19727286-19727389,
           19727784-19728539
          Length = 448

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -3

Query: 390 HRLNQLLLFWRAFPASCFQSFGY 322
           HRL +LL  WR  P+S F   GY
Sbjct: 82  HRLRRLLGLWRRLPSSSFSGSGY 104


>02_05_0424 +
           28841562-28841569,28841636-28841714,28841826-28841894,
           28841965-28842054,28842132-28842270,28842523-28842625,
           28842708-28842760,28842849-28842915,28843087-28843195,
           28843588-28843653,28843740-28843808,28843893-28843959,
           28844038-28844154,28844433-28844656,28845083-28845094
          Length = 423

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
 Frame = +2

Query: 410 AIPKRGRSLLTNM-TRTENLDHLSINSLTKTT 502
           ++P+ GR+ +  + T TE L H+S+ S T+TT
Sbjct: 355 SLPETGRATMHKVSTLTERLTHMSVTSRTRTT 386


>02_03_0180 - 16031366-16031445,16031950-16032022,16032148-16032186,
            16032434-16032715,16032790-16032948,16033034-16033390,
            16033482-16033622,16033919-16034045,16034121-16034263,
            16034740-16034917,16035019-16035552,16035628-16035812,
            16036551-16036637,16036710-16036850,16036896-16037175,
            16037944-16038020,16038326-16039138,16039292-16039801,
            16039926-16040056,16040192-16040246,16040364-16040564,
            16040640-16040909,16041103-16041184,16041271-16041434,
            16041532-16041690,16041762-16042083,16042158-16042544,
            16042811-16042999,16043233-16043317,16043458-16043753,
            16043862-16043965,16044484-16044513,16044602-16044817,
            16044923-16045540,16045718-16045993,16046619-16046762,
            16046854-16046962,16047291-16047475,16047557-16047670,
            16048348-16048479,16048929-16049249,16049424-16049891,
            16054482-16054547,16054691-16054828,16054917-16055015,
            16057098-16057194,16057661-16057761,16057858-16058085,
            16059175-16059381,16059451-16059571,16059921-16059988,
            16060148-16060213,16060396-16060509,16060949-16061300,
            16063571-16063663,16063764-16063922,16064224-16064287,
            16064385-16064577,16064673-16064710,16065510-16065645,
            16065726-16065914,16065994-16066095,16067660-16067777,
            16067861-16067964,16070338-16070346,16071428-16071475,
            16071581-16071676,16072430-16072533,16073964-16074045,
            16076573-16076601,16076708-16076963
          Length = 4246

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = +1

Query: 343  TCGKCSPKQKQLIKTVIKAVIERHPEAWEELVNKYDKDRKF 465
            T GK       LI ++  +   RH EAWE  V  +D   KF
Sbjct: 2560 THGKFETMNAVLICSISASTFNRHLEAWEPFVEPFDGIFKF 2600


>11_06_0766 -
           27115441-27115760,27115878-27116025,27116213-27117417,
           27117510-27117753,27120181-27120357
          Length = 697

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 19/73 (26%), Positives = 34/73 (46%)
 Frame = +1

Query: 283 GPCTPDAKEFKKVIPEALETTCGKCSPKQKQLIKTVIKAVIERHPEAWEELVNKYDKDRK 462
           G  T  A + K V+ +++E+      P  +Q ++  I   +E  PEAW++  +  +    
Sbjct: 137 GKSTEAANQCKSVL-DSVESMFQNGPPDIEQKLQETINKSVELLPEAWKQAGSHQEALAS 195

Query: 463 FRPSFDKFINEDD 501
           +R S     N DD
Sbjct: 196 YRRSLLSQWNLDD 208


>02_01_0344 + 2467191-2468282
          Length = 363

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +1

Query: 349 GKCSPKQKQLIKTVIKAVIERHPEAWEELVNK 444
           G+     K L+K ++K  IE HP+ W E++++
Sbjct: 169 GQAELSNKTLLK-IVKKKIEEHPKRWHEVLSE 199


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,376,568
Number of Sequences: 37544
Number of extensions: 394380
Number of successful extensions: 930
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 930
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)