Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_A19
         (827 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29380-18|ABB88224.1|  733|Caenorhabditis elegans Zygote defecti...    31   1.0  
U29380-17|AAA68733.3|  736|Caenorhabditis elegans Zygote defecti...    31   1.0  
U29380-16|AAS60254.1|  761|Caenorhabditis elegans Zygote defecti...    31   1.0  
U29380-15|AAS60253.1|  777|Caenorhabditis elegans Zygote defecti...    31   1.0  
AY487140-1|AAR32790.1|  733|Caenorhabditis elegans centrosome at...    31   1.0  
Z92834-4|CAB07387.1|  117|Caenorhabditis elegans Hypothetical pr...    31   1.3  
Z77652-11|CAI70405.1|  310|Caenorhabditis elegans Hypothetical p...    30   1.8  
AC024761-4|AAF59466.2|  332|Caenorhabditis elegans Hypothetical ...    29   3.1  
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ...    29   5.4  
AF026215-10|AAB71320.2|  971|Caenorhabditis elegans Hypothetical...    29   5.4  
Z99773-2|CAB16924.1|  291|Caenorhabditis elegans Hypothetical pr...    28   7.1  
Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical pr...    28   7.1  
U28992-4|AAA68392.1|  100|Caenorhabditis elegans Hypothetical pr...    28   7.1  
AC024810-8|AAU20830.1| 1446|Caenorhabditis elegans Hypothetical ...    28   7.1  
Z70212-8|CAB54284.1|  320|Caenorhabditis elegans Hypothetical pr...    28   9.4  
Z50863-6|CAA90739.1|  250|Caenorhabditis elegans Hypothetical pr...    28   9.4  
Z50858-7|CAA90725.1|  250|Caenorhabditis elegans Hypothetical pr...    28   9.4  

>U29380-18|ABB88224.1|  733|Caenorhabditis elegans Zygote defective:
           embryonic lethalprotein 12, isoform d protein.
          Length = 733

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
 Frame = +1

Query: 307 EFKKVIPEAL-ETTCGKCSPKQKQLIKTVIKAVIERHPEAWEELVNKYDKDRKFRPSFDK 483
           +FK ++ E   E    + S K++Q ++TV+ A  +   + W+ + N+Y K+ +     DK
Sbjct: 320 QFKGIVFELTNENDVLRRSDKERQRLQTVLDAA-QSDLDEWKTVANQYQKEAELSKQQDK 378

Query: 484 FINE 495
            I E
Sbjct: 379 EIKE 382


>U29380-17|AAA68733.3|  736|Caenorhabditis elegans Zygote defective:
           embryonic lethalprotein 12, isoform a protein.
          Length = 736

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
 Frame = +1

Query: 307 EFKKVIPEAL-ETTCGKCSPKQKQLIKTVIKAVIERHPEAWEELVNKYDKDRKFRPSFDK 483
           +FK ++ E   E    + S K++Q ++TV+ A  +   + W+ + N+Y K+ +     DK
Sbjct: 320 QFKGIVFELTNENDVLRRSDKERQRLQTVLDAA-QSDLDEWKTVANQYQKEAELSKQQDK 378

Query: 484 FINE 495
            I E
Sbjct: 379 EIKE 382


>U29380-16|AAS60254.1|  761|Caenorhabditis elegans Zygote defective:
           embryonic lethalprotein 12, isoform c protein.
          Length = 761

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
 Frame = +1

Query: 307 EFKKVIPEAL-ETTCGKCSPKQKQLIKTVIKAVIERHPEAWEELVNKYDKDRKFRPSFDK 483
           +FK ++ E   E    + S K++Q ++TV+ A  +   + W+ + N+Y K+ +     DK
Sbjct: 320 QFKGIVFELTNENDVLRRSDKERQRLQTVLDAA-QSDLDEWKTVANQYQKEAELSKQQDK 378

Query: 484 FINE 495
            I E
Sbjct: 379 EIKE 382


>U29380-15|AAS60253.1|  777|Caenorhabditis elegans Zygote defective:
           embryonic lethalprotein 12, isoform b protein.
          Length = 777

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
 Frame = +1

Query: 307 EFKKVIPEAL-ETTCGKCSPKQKQLIKTVIKAVIERHPEAWEELVNKYDKDRKFRPSFDK 483
           +FK ++ E   E    + S K++Q ++TV+ A  +   + W+ + N+Y K+ +     DK
Sbjct: 320 QFKGIVFELTNENDVLRRSDKERQRLQTVLDAA-QSDLDEWKTVANQYQKEAELSKQQDK 378

Query: 484 FINE 495
            I E
Sbjct: 379 EIKE 382


>AY487140-1|AAR32790.1|  733|Caenorhabditis elegans centrosome
           attachment protein A protein.
          Length = 733

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
 Frame = +1

Query: 307 EFKKVIPEAL-ETTCGKCSPKQKQLIKTVIKAVIERHPEAWEELVNKYDKDRKFRPSFDK 483
           +FK ++ E   E    + S K++Q ++TV+ A  +   + W+ + N+Y K+ +     DK
Sbjct: 320 QFKGIVFELTNENDVLRRSDKERQRLQTVLDAA-QSDLDEWKTVANQYQKEAELSKQQDK 378

Query: 484 FINE 495
            I E
Sbjct: 379 EIKE 382


>Z92834-4|CAB07387.1|  117|Caenorhabditis elegans Hypothetical
           protein F39B2.6 protein.
          Length = 117

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 340 TTCGKCSPKQKQLIKTVIKAVIE 408
           T CG+C PK K + K V++ ++E
Sbjct: 24  TNCGRCCPKDKAIKKFVVRNIVE 46


>Z77652-11|CAI70405.1|  310|Caenorhabditis elegans Hypothetical
           protein C06B3.13 protein.
          Length = 310

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 21/73 (28%), Positives = 34/73 (46%)
 Frame = +1

Query: 43  LSASR*IFCVLWGYNRISFHLYFWSYIVLSVKMKLTSFLLVGMAMVSAEFYSSRYDDFDV 222
           L  S  I+C+L+ + +   +   W Y  L + + L S LL+      A+ YS  + DFD 
Sbjct: 98  LMVSERIYCILYPFGKAFTNKKLWCYCFL-IAIVLLSILLIPFFGGCADNYS--FYDFDY 154

Query: 223 KPLVENDRILQSY 261
               E D  + +Y
Sbjct: 155 TSECEPDNHIVTY 167


>AC024761-4|AAF59466.2|  332|Caenorhabditis elegans Hypothetical
           protein Y38C1AA.6 protein.
          Length = 332

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/53 (24%), Positives = 27/53 (50%)
 Frame = +1

Query: 328 EALETTCGKCSPKQKQLIKTVIKAVIERHPEAWEELVNKYDKDRKFRPSFDKF 486
           E L     KC+P   Q +  ++++  E+  + W+E+  K ++ +    S DK+
Sbjct: 245 ERLHYFVQKCNPVIIQCVSEILESASEKDQKEWQEINQKLEEYQNTVSSADKY 297


>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
            protein F55F10.1 protein.
          Length = 4368

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -3

Query: 495  FVNEFIERWSKFSVLVIFVNK 433
            FVNE+I RW KF +   F N+
Sbjct: 2194 FVNEYIHRWRKFGMCSPFCNE 2214


>AF026215-10|AAB71320.2|  971|Caenorhabditis elegans Hypothetical
           protein F09G2.1 protein.
          Length = 971

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +1

Query: 226 PLVENDRILQSYTNCFLDKGPCTPDAKEFKKVIPEALETT 345
           PL+  D+I +  ++C+ +K    PD  E  K+    LE T
Sbjct: 781 PLLATDKIEEIMSSCWSEKSEERPDFDELSKLFATQLEQT 820


>Z99773-2|CAB16924.1|  291|Caenorhabditis elegans Hypothetical
           protein H06A10.1 protein.
          Length = 291

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 13/50 (26%), Positives = 28/50 (56%)
 Frame = -3

Query: 600 PVVRRPYGPPDGEWLPLLMDLTNARGRAKPLKLVVFVNEFIERWSKFSVL 451
           P + R +   +GEWL  L+ L++ + +    +L+V +     +W +F+V+
Sbjct: 77  PKIYRHFSSQNGEWLSKLVSLSHEQHQI-DTRLIVKMTGSAAQWKQFAVV 125


>Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical protein
            F54E4.1 protein.
          Length = 2948

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +1

Query: 322  IPEALETTCGKCSPKQKQLIKTVIKAVIERHPEAWEELVNK 444
            + +A++T C KC+  Q  L   V+  + E  PEA + ++N+
Sbjct: 1731 LKDAVQTLCSKCNDVQLAL---VVVRMYESDPEAQQAMINE 1768


>U28992-4|AAA68392.1|  100|Caenorhabditis elegans Hypothetical
           protein T05C1.5 protein.
          Length = 100

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 16/84 (19%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
 Frame = +1

Query: 145 LTSFLLVGMAMVSAEFYSSRYDDFDVKPLVENDRILQS-YTNCFLDKGPCTPDAKEFKKV 321
           L  F+L  + + + E  + R   + V  ++ +  + +  ++ C + K  C   ++ F+  
Sbjct: 17  LPFFMLSSVIISAQELKTCRTVSYGVDQVITSPDLCEDKFSGCAVRKPYCKTRSRNFEAA 76

Query: 322 IPEALETTCGKCSPKQKQLIKTVI 393
           +      TCG+C      L   V+
Sbjct: 77  MNSFCAKTCGRCKAGSASLPPIVL 100


>AC024810-8|AAU20830.1| 1446|Caenorhabditis elegans Hypothetical
            protein Y54E10A.11 protein.
          Length = 1446

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
 Frame = +2

Query: 428  RSLLTNMTRTENLDHLSINS---LTKTTNFSGLALPLALVRSMSNGNHSPSGGP 580
            R L+  M + EN   L  N    L  +TN   L+LP+ + +S    +H+P  GP
Sbjct: 1110 RLLMPIMFKLENAAALKSNEDSELPVSTNRRKLSLPVMISKSYPKDHHNPHVGP 1163


>Z70212-8|CAB54284.1|  320|Caenorhabditis elegans Hypothetical
           protein R04D3.12 protein.
          Length = 320

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +3

Query: 93  FIPPIFLVLYCIVSKNE 143
           FIP  FL  YCI++KNE
Sbjct: 254 FIPLEFLYYYCIITKNE 270


>Z50863-6|CAA90739.1|  250|Caenorhabditis elegans Hypothetical
           protein F44A6.5 protein.
          Length = 250

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 11/101 (10%)
 Frame = +1

Query: 250 LQSYTNCFLDKGP---------CTPDAKEFKKVIPEALETTCGKCSPKQKQLIKTVIKAV 402
           L ++ NCFL+K P         C     E +K     ++TT        K LI  V +  
Sbjct: 76  LDNFFNCFLNKSPELMMSLLDHCAWAPSEIEKEAKITIKTTQLLAEVDNKTLINVVFEKG 135

Query: 403 IERHPEAWEELVNKYDKD--RKFRPSFDKFINEDD*L*RLG 519
           I   P     ++ ++ KD   K    F+   +E+D L  LG
Sbjct: 136 IFEFPIWIPHILRRFCKDGINKINIQFEGSPSENDLLHHLG 176


>Z50858-7|CAA90725.1|  250|Caenorhabditis elegans Hypothetical
           protein F44A6.5 protein.
          Length = 250

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 11/101 (10%)
 Frame = +1

Query: 250 LQSYTNCFLDKGP---------CTPDAKEFKKVIPEALETTCGKCSPKQKQLIKTVIKAV 402
           L ++ NCFL+K P         C     E +K     ++TT        K LI  V +  
Sbjct: 76  LDNFFNCFLNKSPELMMSLLDHCAWAPSEIEKEAKITIKTTQLLAEVDNKTLINVVFEKG 135

Query: 403 IERHPEAWEELVNKYDKD--RKFRPSFDKFINEDD*L*RLG 519
           I   P     ++ ++ KD   K    F+   +E+D L  LG
Sbjct: 136 IFEFPIWIPHILRRFCKDGINKINIQFEGSPSENDLLHHLG 176


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,989,625
Number of Sequences: 27780
Number of extensions: 369100
Number of successful extensions: 912
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)