Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_A16
(484 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC3D6.15 |rps2501|rps25-1|40S ribosomal protein S25|Schizosacc... 75 6e-15
SPAC694.05c |rps2502|rps25-2, rps25|40S ribosomal protein S25|Sc... 73 2e-14
SPAPB1E7.08c |||membrane transporter|Schizosaccharomyces pombe|c... 29 0.37
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 27 1.1
SPBC336.01 |fbh1|fdh1, fdh|DNA helicase I|Schizosaccharomyces po... 26 2.6
SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomy... 26 3.4
SPAC2G11.13 |atg22||autophagy associated protein Atg22 |Schizosa... 26 3.4
SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Ph... 25 7.9
SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase Snf21|... 25 7.9
>SPBC3D6.15 |rps2501|rps25-1|40S ribosomal protein
S25|Schizosaccharomyces pombe|chr 2|||Manual
Length = 88
Score = 74.9 bits (176), Expect = 6e-15
Identities = 34/73 (46%), Positives = 53/73 (72%)
Frame = +3
Query: 144 VRDKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQ 323
V+DK + +FDK +++ KEVP +K I+ +V+ +R+K+ GSLAR A+ +L E+G+I++
Sbjct: 12 VKDKAQHATVFDKSIIDRINKEVPAFKFISVSVLVDRMKINGSLARIAIRDLAERGVIQK 71
Query: 324 VVQHHGQVIYTRA 362
V QH Q IYTRA
Sbjct: 72 VDQHSKQAIYTRA 84
>SPAC694.05c |rps2502|rps25-2, rps25|40S ribosomal protein
S25|Schizosaccharomyces pombe|chr 1|||Manual
Length = 89
Score = 73.3 bits (172), Expect = 2e-14
Identities = 33/72 (45%), Positives = 52/72 (72%)
Frame = +3
Query: 144 VRDKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQ 323
V+DK + +FDK +++ KEVP +K I+ +V+ +R+K+ GSLAR A+ +L E+G+I++
Sbjct: 12 VKDKAQHATVFDKSIIDRINKEVPAFKFISVSVLVDRMKINGSLARIAIRDLAERGVIQK 71
Query: 324 VVQHHGQVIYTR 359
V QH Q IYTR
Sbjct: 72 VDQHSKQAIYTR 83
>SPAPB1E7.08c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 554
Score = 29.1 bits (62), Expect = 0.37
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -1
Query: 295 SMSALLAREPRTFNLSDTTAGVISLYCGTSLYSFSYVGLSNNTWLFNLSRTFPLDHXFFL 116
S+SA FNL+ GV ++ G S +F+ + + + W F + P+D FL
Sbjct: 139 SLSADTIGRRWAFNLTFLFTGVFAVIAGASP-NFASICVFDALWSFGVGGNLPVDSAIFL 197
Query: 115 -ALP 107
ALP
Sbjct: 198 EALP 201
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 27.5 bits (58), Expect = 1.1
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -1
Query: 199 SFSYVGLSNNTWLFNLSRTFPLDHXFFLALPPP 101
SF Y L NN++L +S + ++ F++ PPP
Sbjct: 1008 SFIYGSLQNNSFLSRVSPSSLEENVFYIQHPPP 1040
>SPBC336.01 |fbh1|fdh1, fdh|DNA helicase I|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 878
Score = 26.2 bits (55), Expect = 2.6
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3
Query: 335 MLDYLFDETFFPKLDECSSR 276
M D LF E+F +LD C R
Sbjct: 682 MADELFSESFLSRLDNCEKR 701
>SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 613
Score = 25.8 bits (54), Expect = 3.4
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Frame = -1
Query: 307 FSLSSMSALLAREPRTFN--LSDTTAGVISLYCGTSLYSFSYVGLSNNT---WLFNLSRT 143
F S M+ + + FN LSD VIS G + Y F V LS+ T W N +
Sbjct: 203 FYSSIMNEVAEKANAGFNISLSDYWGRVISRTLGDTTYGFPNVSLSSITSQEWYRNANFP 262
Query: 142 FPL 134
+P+
Sbjct: 263 YPI 265
>SPAC2G11.13 |atg22||autophagy associated protein Atg22
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 529
Score = 25.8 bits (54), Expect = 3.4
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = -1
Query: 394 IVYATGSSPLVARV*ITCP*CWTTCLMRPFSLSSMSALLAREPRTFNLSDTTAGVISLYC 215
I+Y T ++P++ + +T CW L P L ++ L P + SD ++
Sbjct: 260 ILYKTNNNPIILPITVTVCSCWWLILSTP--LCTIVTL----PVENHSSDAILTLLYNSV 313
Query: 214 GTSLYSFSYVGLSNNTWLFNLSRTF 140
S +SF + ++ LF SR F
Sbjct: 314 KESYHSFKHAMSISSIRLFLFSRLF 338
>SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein
Phf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 538
Score = 24.6 bits (51), Expect = 7.9
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +1
Query: 73 KKHRXXRKDPVAAKPRRXSGPKEKFVTS*TTRC 171
K HR DP+ P R GP + V + +C
Sbjct: 203 KVHRPNHFDPLVKLPTRRRGPGRRPVVALAMKC 235
>SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase
Snf21|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1199
Score = 24.6 bits (51), Expect = 7.9
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 246 SERLKVRGSLARRALIELREKGLIKQVVQHHGQVIY 353
+ERL + ++ R AL+EL++ LIKQ QV++
Sbjct: 185 NERLNL-DTIKRNALVELKKLRLIKQQESLRHQVMH 219
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,661,325
Number of Sequences: 5004
Number of extensions: 31968
Number of successful extensions: 101
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 101
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 186042952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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