Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_A15
(462 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF002198-10|AAF99937.1| 471|Caenorhabditis elegans Hypothetical... 32 0.17
Z81103-7|CAB03211.3| 579|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z81103-5|CAD56592.2| 550|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z81088-12|CAD56587.2| 579|Caenorhabditis elegans Hypothetical p... 29 1.2
U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical pr... 28 2.8
U40029-3|AAA81124.1| 269|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z68748-6|CAD27621.1| 88|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z81082-6|CAB03098.1| 279|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 27 8.6
AL034543-5|CAA22519.1| 279|Caenorhabditis elegans Hypothetical ... 27 8.6
AL034543-1|CAA22516.1| 243|Caenorhabditis elegans Hypothetical ... 27 8.6
>AF002198-10|AAF99937.1| 471|Caenorhabditis elegans Hypothetical
protein F35F10.12 protein.
Length = 471
Score = 32.3 bits (70), Expect = 0.17
Identities = 26/70 (37%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = +1
Query: 73 DPDPFFAQPT-VGNGYEPIDNRPYIVNPPKDYN--PNGNGYEPIDNGAYYVDRPQGRPYF 243
DP+ +QPT +G G P P V PP Y P +G DNGA P G PY
Sbjct: 345 DPNLPPSQPTPIGGGVAPAGVAPAGVVPPPGYGFLPMTDG---TDNGAGDTPYPVGPPYP 401
Query: 244 KPTPFPGARG 273
P P G
Sbjct: 402 SDVPAPYPSG 411
>Z81103-7|CAB03211.3| 579|Caenorhabditis elegans Hypothetical
protein M04G12.4a protein.
Length = 579
Score = 29.5 bits (63), Expect = 1.2
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +1
Query: 94 QPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 192
QP VGN Y+P P +PP Y GY P
Sbjct: 91 QPLVGNSYDP----PVRFDPPYAYRATATGYMP 119
>Z81103-5|CAD56592.2| 550|Caenorhabditis elegans Hypothetical
protein M04G12.4b protein.
Length = 550
Score = 29.5 bits (63), Expect = 1.2
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +1
Query: 94 QPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 192
QP VGN Y+P P +PP Y GY P
Sbjct: 62 QPLVGNSYDP----PVRFDPPYAYRATATGYMP 90
>Z81088-12|CAD56587.2| 579|Caenorhabditis elegans Hypothetical
protein M04G12.4a protein.
Length = 579
Score = 29.5 bits (63), Expect = 1.2
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +1
Query: 94 QPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 192
QP VGN Y+P P +PP Y GY P
Sbjct: 91 QPLVGNSYDP----PVRFDPPYAYRATATGYMP 119
>U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical
protein C30G12.1 protein.
Length = 469
Score = 28.3 bits (60), Expect = 2.8
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 161 TTTLMETATNLSTTVHITWTVPKADLTSSLPLS 259
TTT M T T ST + T T P+ ++P S
Sbjct: 294 TTTTMTTTTRTSTAIPTTTTTPRQISLQTIPFS 326
>U40029-3|AAA81124.1| 269|Caenorhabditis elegans Hypothetical
protein F10G7.6 protein.
Length = 269
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +1
Query: 118 EPIDNRPYI-VNPPKDYNPNGNGYEPIDNG 204
EP D P + V PP + PN NG P NG
Sbjct: 239 EPDDPAPPLPVAPPPLHGPNNNGNGPAQNG 268
>Z68748-6|CAD27621.1| 88|Caenorhabditis elegans Hypothetical
protein F13H10.6 protein.
Length = 88
Score = 27.5 bits (58), Expect = 4.9
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = +1
Query: 115 YEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPTP 255
Y+P + P P P GY P G YY QG PY+ P
Sbjct: 3 YQPYNQPPPYTQQPGYPPPGSAGYVPQ-QGGYYPQGQQG-PYYPQQP 47
>Z81082-6|CAB03098.1| 279|Caenorhabditis elegans Hypothetical
protein F42G4.6 protein.
Length = 279
Score = 26.6 bits (56), Expect = 8.6
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +1
Query: 106 GNGYEPIDN--RPYIVNPPKDYNPNGNGYEPIDNGAYYVDRP 225
GN P ++ P +N PK + NG +P+DN YV+ P
Sbjct: 47 GNSRTPYNSIYEPLSLNKPKPDGRSSNGKKPVDN--EYVNLP 86
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 26.6 bits (56), Expect = 8.6
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 155 PKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSLVLAVGSKE 286
PKTTT++ ++T ST +T +A T++ P + V +K+
Sbjct: 453 PKTTTIVASSTETST---VTTDATEATTTTTAPTTTVATTTTKK 493
>AL034543-5|CAA22519.1| 279|Caenorhabditis elegans Hypothetical
protein F42G4.6 protein.
Length = 279
Score = 26.6 bits (56), Expect = 8.6
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +1
Query: 106 GNGYEPIDN--RPYIVNPPKDYNPNGNGYEPIDNGAYYVDRP 225
GN P ++ P +N PK + NG +P+DN YV+ P
Sbjct: 47 GNSRTPYNSIYEPLSLNKPKPDGRSSNGKKPVDN--EYVNLP 86
>AL034543-1|CAA22516.1| 243|Caenorhabditis elegans Hypothetical
protein Y81G3A.1 protein.
Length = 243
Score = 26.6 bits (56), Expect = 8.6
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +1
Query: 106 GNGYEPIDN--RPYIVNPPKDYNPNGNGYEPIDNGAYYVDRP 225
GN P ++ P +N PK + NG +P+DN YV+ P
Sbjct: 47 GNSRTPYNSIYEPLSLNKPKPDGRSSNGKKPVDN--EYVNLP 86
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,884,576
Number of Sequences: 27780
Number of extensions: 202159
Number of successful extensions: 606
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 606
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 818426686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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