Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_A14
(797 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0071 + 548255-548399,548478-548651,548787-548892,548992-54... 149 3e-36
09_02_0075 + 3916373-3916400,3916760-3916858,3916943-3917116,391... 149 3e-36
10_08_0258 + 16261454-16261540,16261636-16261712,16262734-162628... 50 2e-06
02_05_1230 - 35099942-35100018,35100138-35100221,35100367-351004... 49 4e-06
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 30 2.5
02_01_0725 - 5422477-5422641,5422721-5422792,5422876-5422958,542... 30 2.5
04_04_0792 - 28091597-28091675,28091853-28091908,28092151-280922... 29 5.7
12_02_0279 - 16704284-16704925 28 7.5
03_06_0064 + 31395168-31395223,31396906-31397368,31397440-313975... 28 7.5
07_03_1285 + 25477542-25477625,25477776-25477832,25477973-254780... 28 9.9
>01_01_0071 +
548255-548399,548478-548651,548787-548892,548992-549130,
549216-549293,549395-549460,550061-550201,550417-550527,
550614-550655,550739-550825,551033-551118,551681-551684
Length = 392
Score = 149 bits (361), Expect = 3e-36
Identities = 72/133 (54%), Positives = 95/133 (71%), Gaps = 2/133 (1%)
Frame = +3
Query: 186 IEXAGIPKEXIKEVYIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIML 365
+ A + ++EV++GNV SANLGQAPARQA + AGLP + CTTVNKVC+SGMK++ML
Sbjct: 51 LRRANVEPALVQEVFMGNVLSANLGQAPARQAALGAGLPDTVPCTTVNKVCSSGMKAVML 110
Query: 366 AAQGLQTGAQDIILAGGMESMSNVPFYL--KRGETSYGGMQLVDGIVFDGLTDVYNKFHM 539
AAQ +Q G D+++AGGMESMSN P Y+ R + +G L+DG++ DGL DVYN F M
Sbjct: 111 AAQTIQLGMHDVVVAGGMESMSNAPKYVAAARRGSRFGHDVLIDGMLKDGLWDVYNDFPM 170
Query: 540 GNCAENTAKNYKL 578
G CAE A + +
Sbjct: 171 GMCAELCADQHSI 183
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = +2
Query: 575 ITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAEXE 721
I+R++QD YA+ S +R+ AA ++ F E+ PV + RG P + + +
Sbjct: 183 ISREEQDLYAIQSNERAIAARDSGTFSWEIAPVEISSGRGKPPLIVDKD 231
>09_02_0075 +
3916373-3916400,3916760-3916858,3916943-3917116,
3917207-3917312,3917671-3917809,3918457-3918534,
3918863-3918928,3919213-3919298,3919939-3920038,
3920245-3920355,3920457-3920498,3920671-3920757,
3921013-3921102
Length = 401
Score = 149 bits (360), Expect = 3e-36
Identities = 72/133 (54%), Positives = 93/133 (69%), Gaps = 2/133 (1%)
Frame = +3
Query: 186 IEXAGIPKEXIKEVYIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIML 365
++ A + ++EV+ GNV SANLGQAPARQA + AG+P + +C+ VNKVCASGMK+ M
Sbjct: 45 LKRANVDPALVQEVFFGNVLSANLGQAPARQAALGAGIPNTVVCSAVNKVCASGMKATMF 104
Query: 366 AAQGLQTGAQDIILAGGMESMSNVPFYL--KRGETSYGGMQLVDGIVFDGLTDVYNKFHM 539
AAQ + G DI++AGGMESMSN P Y+ R + +G LVDG++ DGL DVY F M
Sbjct: 105 AAQSILLGINDIVVAGGMESMSNAPKYIAEARKGSRFGHDTLVDGMLKDGLWDVYGDFAM 164
Query: 540 GNCAENTAKNYKL 578
GNCAE A N+ L
Sbjct: 165 GNCAELCADNHAL 177
Score = 57.6 bits (133), Expect = 1e-08
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +2
Query: 575 ITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRG-APVIFAEXEXYKRVNFEKF 751
+TR+DQD YA+ S +R AA + AF E+VP+ VP RG PV+ + E + + K
Sbjct: 177 LTREDQDAYAIQSNERGIAARNSGAFAWEIVPIEVPVGRGKPPVLVDKDEGLDKFDPVKL 236
Query: 752 TKLSTVFQKENGTVT 796
KL F++ GTVT
Sbjct: 237 KKLRPSFKENGGTVT 251
>10_08_0258 +
16261454-16261540,16261636-16261712,16262734-16262818,
16262931-16263057,16263147-16263245,16263343-16263410,
16263514-16263621,16263727-16263804,16263921-16264053,
16264138-16264234,16264465-16264588,16264668-16264776,
16264899-16264982,16265071-16265180
Length = 461
Score = 50.4 bits (115), Expect = 2e-06
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +3
Query: 204 PKEXIKEVYIGNVCSANLGQA-PARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGL 380
P E + ++ +G V + +A R A +AG P + TVN+ C+SG++++ A +
Sbjct: 93 PSE-VGDIVVGTVLAPGSQRAIECRMAAFYAGFPDTVPLMTVNRQCSSGLQAVANVASNI 151
Query: 381 QTGAQDIILAGGMESMS 431
+ G DI +A G+ESM+
Sbjct: 152 KAGLYDIGIAAGLESMT 168
Score = 41.1 bits (92), Expect = 0.001
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Frame = +2
Query: 560 SKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVP---VPQKRGAP---VIFAEXE 721
+K+ ITR +QD+ AV S++++AAA + F +E+VPV V K G V+ A+
Sbjct: 203 AKRFGITRMEQDQAAVESHRKAAAAAASGKFKEEIVPVHTKIVDPKTGEEKEIVVSADDG 262
Query: 722 XYKRVNFEKFTKLSTVFQKENGTVT 796
+ +KL F K+ GT T
Sbjct: 263 IRPGTSLAVLSKLKPAFSKD-GTTT 286
>02_05_1230 -
35099942-35100018,35100138-35100221,35100367-35100475,
35100564-35100687,35101157-35101253,35101375-35101507,
35101654-35101731,35101821-35101928,35102011-35102078,
35102181-35102279,35102379-35102505,35102623-35102707,
35103297-35103373,35103482-35103562
Length = 448
Score = 49.2 bits (112), Expect = 4e-06
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = +3
Query: 216 IKEVYIGNVCSANLGQA-PARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGA 392
I ++ +G V +A R A +AG+P++ TVN+ C+SG++++ A ++ G
Sbjct: 94 IGDIVVGTVLGPGSQRAIECRAAAFYAGVPENVPVRTVNRQCSSGLQAVADVAAAIKAGF 153
Query: 393 QDIILAGGMESMS 431
DI + G+ESMS
Sbjct: 154 YDIGIGAGLESMS 166
Score = 46.0 bits (104), Expect = 3e-05
Identities = 32/80 (40%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Frame = +2
Query: 575 ITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVP---VPQKRGAP---VIFAEXEXYKRV 736
+TRQ+QD+ A S++R+AAA A F DE+VPVP V K G VI +
Sbjct: 206 VTRQEQDQAAAESHRRAAAATAAGKFKDEIVPVPTKIVDPKTGEEKKVVISVDDGIRPGT 265
Query: 737 NFEKFTKLSTVFQKENGTVT 796
KL VF+K+ GT T
Sbjct: 266 TASGLAKLKPVFRKD-GTTT 284
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 29.9 bits (64), Expect = 2.5
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +2
Query: 233 WQCLFCKFGPSTCKTSCNICRFAKKYHMY 319
WQC C+ G K SC C + + +Y
Sbjct: 43 WQCTICEHGNDAKKKSCEQCGVLRYFSLY 71
>02_01_0725 -
5422477-5422641,5422721-5422792,5422876-5422958,
5423113-5423173,5423305-5423381,5423456-5423522,
5423770-5423803,5423894-5423974,5424285-5424436,
5424529-5424615,5425019-5425126,5425906-5426259
Length = 446
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 336 CASGMKSIMLAAQGLQTGAQDIILAGGMES 425
CA+G SI A + +Q G D+++AGG ES
Sbjct: 193 CATGAHSIGDATRMIQFGDADVMVAGGTES 222
>04_04_0792 -
28091597-28091675,28091853-28091908,28092151-28092211,
28092290-28092363,28092865-28092945,28093127-28093201,
28093276-28093395,28093486-28093566,28093644-28093712,
28094057-28094128,28094220-28094362,28094452-28094566,
28094651-28094774,28095124-28095476,28096035-28096374,
28096914-28097124,28097209-28097482,28097570-28097788,
28097868-28098004,28098117-28098375
Length = 980
Score = 28.7 bits (61), Expect = 5.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 389 SPRYNTCWWDGIYVKCTFLF 448
S Y+ CWW + V+C F F
Sbjct: 470 SDLYDRCWWPPVCVRCIFRF 489
>12_02_0279 - 16704284-16704925
Length = 213
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 308 YHMYNCKQSMCLWH 349
YH Y CK MCLWH
Sbjct: 201 YHKY-CKSRMCLWH 213
>03_06_0064 +
31395168-31395223,31396906-31397368,31397440-31397598,
31397686-31397751,31397856-31397935,31397991-31398099
Length = 310
Score = 28.3 bits (60), Expect = 7.5
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +2
Query: 347 HEIYNVGSTRSTNWSPRYNTCWW 415
H + +G+ S +W P TC+W
Sbjct: 65 HALGGIGACSSVHWQPDRGTCYW 87
>07_03_1285 +
25477542-25477625,25477776-25477832,25477973-25478040,
25478187-25478391,25478429-25478586,25478865-25478940,
25479065-25479124,25479186-25479236,25479663-25479741,
25480183-25480271
Length = 308
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/33 (30%), Positives = 20/33 (60%), Gaps = 5/33 (15%)
Frame = +2
Query: 281 CNICR-----FAKKYHMYNCKQSMCLWHEIYNV 364
C++CR F +++H NC +++C H Y++
Sbjct: 15 CDVCRCTFTTFRRRHHCRNCGRTLCHEHSSYHM 47
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,127,933
Number of Sequences: 37544
Number of extensions: 348019
Number of successful extensions: 929
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 925
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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