Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_A13
         (912 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_03_0133 + 14727510-14727651,14727742-14728078,14728448-14728763     30   2.9  
04_03_0399 - 15414405-15416717,15416739-15417524,15417776-15417784     29   6.8  
04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093           29   6.8  
02_05_0724 + 31239139-31239382,31239477-31239798,31239895-31240204     28   9.0  

>03_03_0133 + 14727510-14727651,14727742-14728078,14728448-14728763
          Length = 264

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 5/36 (13%)
 Frame = -1

Query: 552 GHLPLS--NVTCRSRGN---TFNGNSYFN*VSVNNL 460
           G +P+S   V CR +G    T NG+SYFN V V+N+
Sbjct: 152 GIVPVSYRRVACRRKGGMRFTINGHSYFNLVLVSNV 187


>04_03_0399 - 15414405-15416717,15416739-15417524,15417776-15417784
          Length = 1035

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = +2

Query: 719 ACDYLMHFLPLDPNMPVLPHIS-NYTGKVPIAAPLKTAN 832
           +C  L+H LPL  N+P L  I   Y   +    PL TAN
Sbjct: 865 SCPRLIHVLPLSNNLPSLETIQILYCTSLIYVFPLNTAN 903


>04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093
          Length = 1040

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = +2

Query: 719 ACDYLMHFLPLDPNMPVLPHIS-NYTGKVPIAAPLKTAN 832
           +C  L+H LPL  N+P L  I   Y   +    PL TAN
Sbjct: 870 SCPRLIHVLPLSNNLPSLETIQILYCTSLIYVFPLNTAN 908


>02_05_0724 + 31239139-31239382,31239477-31239798,31239895-31240204
          Length = 291

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 5/36 (13%)
 Frame = -1

Query: 552 GHLPLS--NVTCRSRGN---TFNGNSYFN*VSVNNL 460
           G +P+S   V C+ +G    T NG+SYFN V V N+
Sbjct: 181 GIVPVSYRRVACQKKGGIRFTINGHSYFNLVLVTNV 216


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,550,298
Number of Sequences: 37544
Number of extensions: 387228
Number of successful extensions: 730
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 730
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)