Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_A13
         (912 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.            27   1.0  
AJ970247-1|CAI96719.1|  132|Anopheles gambiae putative reverse t...    23   9.7  
AJ970246-1|CAI96718.1|  132|Anopheles gambiae putative reverse t...    23   9.7  

>AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.
          Length = 438

 Score = 26.6 bits (56), Expect = 1.0
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = -2

Query: 782 ICVEAQACWDPKAE-NASNNHTLMQSTHYSNSPMCSYF 672
           IC   + CWD  AE   S++  L + + Y+  P   YF
Sbjct: 383 ICETMEDCWDHDAEARLSSSCVLERLSQYARFPTRQYF 420


>AJ970247-1|CAI96719.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 23.4 bits (48), Expect = 9.7
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +2

Query: 785 NYTGKVPIAAPLKTANRPLYSPSLLLISDLTGSVINNQH 901
           NY G  P+AA  K     +Y P   L++     +  NQH
Sbjct: 1   NYRGITPLAAIAKVLELLVYEP---LLASARNYISPNQH 36


>AJ970246-1|CAI96718.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 23.4 bits (48), Expect = 9.7
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +2

Query: 785 NYTGKVPIAAPLKTANRPLYSPSLLLISDLTGSVINNQH 901
           NY G  P+AA  K     +Y P   L++     +  NQH
Sbjct: 1   NYRGITPLAAIAKVLELLVYEP---LLASARNYISPNQH 36


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 868,976
Number of Sequences: 2352
Number of extensions: 17407
Number of successful extensions: 59
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 98814789
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)