Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_A09
         (411 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9W380 Cluster: CG9034-PA; n=5; Endopterygota|Rep: CG90...    44   0.002
UniRef50_A5AJ56 Cluster: Putative uncharacterized protein; n=1; ...    33   1.7  
UniRef50_A0JMR7 Cluster: MGC154335 protein; n=3; Xenopus|Rep: MG...    32   4.0  
UniRef50_Q10YQ7 Cluster: Putative uncharacterized protein precur...    31   9.1  
UniRef50_A5AIG1 Cluster: Putative uncharacterized protein; n=1; ...    31   9.1  
UniRef50_O29373 Cluster: Ribose ABC transporter, permease protei...    31   9.1  

>UniRef50_Q9W380 Cluster: CG9034-PA; n=5; Endopterygota|Rep:
           CG9034-PA - Drosophila melanogaster (Fruit fly)
          Length = 77

 Score = 43.6 bits (98), Expect = 0.002
 Identities = 19/32 (59%), Positives = 21/32 (65%)
 Frame = +1

Query: 160 NYVKNDGDNRRYKGTYVVMRPDDPRVKLIRKE 255
           NY   DGDNRRYK  YVV R DDPR   +R +
Sbjct: 43  NYYAKDGDNRRYKLGYVVYRHDDPRALKVRND 74


>UniRef50_A5AJ56 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 418

 Score = 33.5 bits (73), Expect = 1.7
 Identities = 20/48 (41%), Positives = 24/48 (50%)
 Frame = +3

Query: 150 WSIQLREERWRQ*KVQGYLCGDEAGRPKSEAYTQGVNLKLNILPVLFV 293
           W+I    E W + KV  +  GDE GR   EAY Q   LKL     LF+
Sbjct: 34  WTINFDYEAWAKDKV--FHVGDELGRDAEEAYIQRTPLKLQ-FETLFI 78


>UniRef50_A0JMR7 Cluster: MGC154335 protein; n=3; Xenopus|Rep:
           MGC154335 protein - Xenopus laevis (African clawed frog)
          Length = 867

 Score = 32.3 bits (70), Expect = 4.0
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -3

Query: 154 LQEHPDQYQQDLSLLRQKFXGRXVPYPVELAVQAI*LEAAA 32
           L++ P + Q+ L LL QKF  R   YP+      I L+ AA
Sbjct: 134 LEKRPSRKQKSLGLLCQKFLARYPSYPISTEKMTISLDEAA 174


>UniRef50_Q10YQ7 Cluster: Putative uncharacterized protein
           precursor; n=3; Trichodesmium erythraeum IMS101|Rep:
           Putative uncharacterized protein precursor -
           Trichodesmium erythraeum (strain IMS101)
          Length = 929

 Score = 31.1 bits (67), Expect = 9.1
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -3

Query: 175 RSSRNCMLQEHPDQYQQDLSLLRQKFXGRXVPY 77
           R+     LQ++  Q+QQ L + RQ+F G+ V Y
Sbjct: 62  RTMSQIKLQQNNQQFQQKLEIARQEFQGKIVEY 94


>UniRef50_A5AIG1 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 348

 Score = 31.1 bits (67), Expect = 9.1
 Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
 Frame = +3

Query: 84  TXLPXNFCLNRLRS-CWYWSGCSWSIQLREER 176
           T  P  FC  R    CW WS C W   L  +R
Sbjct: 230 TNAPTTFCTVRSPGICWLWSWCKWKRHLMGKR 261


>UniRef50_O29373 Cluster: Ribose ABC transporter, permease protein;
           n=2; cellular organisms|Rep: Ribose ABC transporter,
           permease protein - Archaeoglobus fulgidus
          Length = 310

 Score = 31.1 bits (67), Expect = 9.1
 Identities = 14/51 (27%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
 Frame = -1

Query: 318 ILHNIWI*EQTTQAIYLVSGL-LLAYKLHSWVVRPHHHIGTLVPSIVSIVL 169
           ++ + W+ ++     YL  GL +L++KL +  +   +H+  +VP +V+IV+
Sbjct: 232 VIFSGWMPQRAVFGAYLFGGLDVLSFKLQATGIEVSYHLMKMVPYVVTIVV 282


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 316,769,194
Number of Sequences: 1657284
Number of extensions: 5334915
Number of successful extensions: 12750
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12750
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 18619342852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)