Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_A09
         (411 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein p...    24   1.9  
CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein...    23   3.3  
AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.            23   3.3  

>AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein
           protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 15/51 (29%), Positives = 19/51 (37%)
 Frame = -3

Query: 226 RPASSPHRYPCTFYCLHRSSRNCMLQEHPDQYQQDLSLLRQKFXGRXVPYP 74
           R A   H  PCT        R C+  E PD     L     ++ G+  P P
Sbjct: 238 RCAEDKHEGPCT------RERKCLGCEGPDAIGHSLGQRSCRYFGKITPQP 282


>CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein
           protein.
          Length = 420

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -1

Query: 243 KLHSWVVRPHHHIGTLVPSIVSIVLHV 163
           K ++W  R     GT   S+VSIVL V
Sbjct: 6   KNYTWQQRSFPSTGTSSQSVVSIVLRV 32


>AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.
          Length = 420

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -1

Query: 243 KLHSWVVRPHHHIGTLVPSIVSIVLHV 163
           K ++W  R     GT   S+VSIVL V
Sbjct: 6   KNYTWQQRSFPSTGTSSQSVVSIVLRV 32


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 339,097
Number of Sequences: 2352
Number of extensions: 5683
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33349914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)