Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_A08
         (824 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032626-27|CAA21541.1|  271|Caenorhabditis elegans Hypothetical...   146   2e-35
AL034364-4|CAA22250.2|  290|Caenorhabditis elegans Hypothetical ...    32   0.43 
Z71185-12|CAA94906.3|  460|Caenorhabditis elegans Hypothetical p...    30   1.7  
AC024799-6|AAK72315.1|  306|Caenorhabditis elegans Serpentine re...    29   3.1  
Z81489-2|CAB04011.2|  360|Caenorhabditis elegans Hypothetical pr...    29   4.0  
AF016419-8|AAG24053.1|  293|Caenorhabditis elegans Serpentine re...    29   4.0  
Z46791-5|CAA86755.2|  948|Caenorhabditis elegans Hypothetical pr...    29   5.3  
AF039050-1|AAC47934.2|  344|Caenorhabditis elegans Seven tm rece...    29   5.3  
U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical pr...    28   7.1  
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr...    28   9.3  
AL021503-2|CAA16421.1|  320|Caenorhabditis elegans Hypothetical ...    28   9.3  

>AL032626-27|CAA21541.1|  271|Caenorhabditis elegans Hypothetical
           protein Y37D8A.17 protein.
          Length = 271

 Score =  146 bits (354), Expect = 2e-35
 Identities = 77/208 (37%), Positives = 119/208 (57%), Gaps = 2/208 (0%)
 Frame = +2

Query: 164 PPKGIPALKAHIIANKIDVALWGVRVITVLCTIGYVFPLFNN-PV-SAFYKALLANAATS 337
           PP    ++  ++ AN ++  L+  RV+TV   + Y+ P     P  SA+YK   A+AAT 
Sbjct: 31  PPPAYSSISQYVSANTMECVLFAARVLTVFFALNYMIPFIGLVPAHSAYYKIFAASAATF 90

Query: 338 ALRLHQRIPAREISLSREFMARFFLEDSAHYLFYSLIFMNVVPNLLILVPIFLFALLHAA 517
           ALRLH RI   + +L+ +F+ R  +EDS HYL YS++F+   P  +  +P+ ++A LHA 
Sbjct: 91  ALRLHTRIQG-QFALNAQFIQRLIIEDSFHYLVYSVVFLMAAPVSMAALPVTIYAALHAC 149

Query: 518 SYSLTILDTLGQNSLWVARLLISLVEFQSRNILRAAALAEIVLFPVVLIMALFGHCGLMS 697
           ++   IL   G  S  + +L       Q++N L   A +EI L P+++ +   G   L+ 
Sbjct: 150 TFMTKILRETGHTSSIIPKLE-QFTAHQTQNALGIIACSEIFLVPLLVSLIFSGKGSLLL 208

Query: 698 PFVYYYFVTWRYASRRNPYTRNTFRELR 781
           PF YY F++ RYASRRNP TR  F ++R
Sbjct: 209 PFAYYRFLSLRYASRRNPSTRQAFAQMR 236


>AL034364-4|CAA22250.2|  290|Caenorhabditis elegans Hypothetical
           protein W06D4.2 protein.
          Length = 290

 Score = 32.3 bits (70), Expect = 0.43
 Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
 Frame = +2

Query: 392 FMARFFLEDSAHYLFYSLIFMNVVPNLLILVPIFLFALLHAASYSLTILDTLGQNSLWVA 571
           F +  F    + YLF   + +++ P  + L P F+FALL       T L +L + S ++A
Sbjct: 149 FSSTLFFGIFSGYLFGPRM-LSLAPTTIFLPP-FMFALLFDNGILPTPLVSLNRQSFFIA 206

Query: 572 RLLIS--LVEFQSRNILRAAALAEIVLFPVVLIMALFGHCGLMSPFV 706
              IS  +  F +  +L + ++  I LF +V +  L+ H  ++  FV
Sbjct: 207 FASISVFITTFLASIVLGSFSIV-ISLFNIVHVTGLYIHFQVIMQFV 252


>Z71185-12|CAA94906.3|  460|Caenorhabditis elegans Hypothetical
           protein C35A5.3 protein.
          Length = 460

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +1

Query: 469 FVNIGANLFICAATRCFVFLDYP*YSWSE 555
           FV++G ++FI  A   F+F D P  SW+E
Sbjct: 417 FVSLGVSMFIANAISVFIFTDQP-ASWTE 444


>AC024799-6|AAK72315.1|  306|Caenorhabditis elegans Serpentine
           receptor, class x protein5 protein.
          Length = 306

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
 Frame = +2

Query: 437 YSLIFMNVVPNLLILVPIFLFALL--HAASYSLTILDTLGQ-NSLWVARLLISLVEFQSR 607
           + L F+++  NLLI +P+F FA     ++ Y +   + +     L+VA    SL     R
Sbjct: 12  FCLSFVSICLNLLIFIPVFRFAFFGKRSSIYLIAFFNIISDLQQLFVACFHSSLSIIFGR 71

Query: 608 NILRAAALAEIVLF 649
            +L  A +    +F
Sbjct: 72  YVLSGARINSFSVF 85


>Z81489-2|CAB04011.2|  360|Caenorhabditis elegans Hypothetical
           protein C55A1.3 protein.
          Length = 360

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = +2

Query: 431 LFYSLIFMNVVPNLLILVPIFLFALLHAASYSLTILDTLGQNSLWVARLLISLVEF 598
           LFY+L+F  ++P +L+ +P  L  L      S+     L   S+++  +L  L  F
Sbjct: 260 LFYALVFQTLIPVILMHIPASLGFLFSMFGQSILFFGELPTFSVFLYPILDPLPNF 315


>AF016419-8|AAG24053.1|  293|Caenorhabditis elegans Serpentine
           receptor, class x protein6 protein.
          Length = 293

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
 Frame = +2

Query: 437 YSLIFMNVVPNLLILVPIFLFALLHAAS--YSLTILDTLGQ-NSLWVARLLISLVEFQSR 607
           + L F+++  NLLI +P+F FA     S  Y +   + +     L+VA    SL     R
Sbjct: 12  FCLSFVSICLNLLIFIPVFRFAFFGKKSSIYLIAFFNIISDLLQLFVACFHSSLSIIFGR 71

Query: 608 NILRAAALAEIVLF 649
            +L  A +  + +F
Sbjct: 72  YVLTGARINNLSVF 85


>Z46791-5|CAA86755.2|  948|Caenorhabditis elegans Hypothetical
           protein C09G5.6 protein.
          Length = 948

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = +1

Query: 121 NQHGRSKSASRRHWSTQRHPSLESSHHCQ*NRRSSLGGPR 240
           + +GR  ++SRR +  Q+ PS  S+ H   N R+SL  P+
Sbjct: 161 DNYGREPASSRRPYPPQQPPS-TSAPHSSPNNRTSLYNPQ 199


>AF039050-1|AAC47934.2|  344|Caenorhabditis elegans Seven tm
           receptor protein 247 protein.
          Length = 344

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 15/56 (26%), Positives = 29/56 (51%)
 Frame = +2

Query: 431 LFYSLIFMNVVPNLLILVPIFLFALLHAASYSLTILDTLGQNSLWVARLLISLVEF 598
           LFY+L+F  ++P +L+ +P     L+     S+ +   L   S+++  +L  L  F
Sbjct: 245 LFYALVFQTLIPVILMHIPASFGFLVSIFGNSIQLFGQLPTFSIFLFPMLDPLPNF 300


>U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical protein
            W02C12.1 protein.
          Length = 1372

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +1

Query: 586  PGRVPVAEHSPGRGACRDRAVPGRTYNGI 672
            PG++  +E +   G C+D   PG  Y+ +
Sbjct: 971  PGQITASEGAISEGECKDNCPPGHQYDSL 999


>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
            K06A9.1b protein.
          Length = 2232

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -1

Query: 653  PGTARSRQAPRPGECSATGTRPGR*ADGPPTTNSDQEYQG 534
            PGT  +  +P P + +  G+  G  + G  TT+ +   QG
Sbjct: 890  PGTTLTSTSPSPSQSTTIGSTQGSTSPGISTTSEEMTSQG 929


>AL021503-2|CAA16421.1|  320|Caenorhabditis elegans Hypothetical
           protein Y68A4A.3 protein.
          Length = 320

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +2

Query: 431 LFYSLIFMNVVPNLLILVP 487
           LFYSLIF + +P LL+ +P
Sbjct: 239 LFYSLIFQSAIPCLLMYLP 257


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,812,163
Number of Sequences: 27780
Number of extensions: 378498
Number of successful extensions: 1427
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1425
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)