Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_A07
         (594 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92833-5|CAK12560.1|  411|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z92833-4|CAK12559.1|  442|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z92833-3|CAB07378.1|  506|Caenorhabditis elegans Hypothetical pr...    29   1.9  
U51163-1|AAA96319.1|  506|Caenorhabditis elegans fork head/HNF-3...    29   1.9  
AF016685-1|AAG24144.2|  300|Caenorhabditis elegans Hypothetical ...    28   4.4  

>Z92833-5|CAK12560.1|  411|Caenorhabditis elegans Hypothetical
           protein F38A6.1c protein.
          Length = 411

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
 Frame = +1

Query: 199 ARHVKHPGHGFKGWFWA*HERCSHF--DGCR*RREKN---DETANQRKREDIN 342
           AR    PG   KG FW  HE C +   +GC  RR+K     E    RK+ + N
Sbjct: 203 ARSPDKPG---KGSFWTLHEHCGNMFENGCYLRRQKRFKVKEREPSRKKRNAN 252


>Z92833-4|CAK12559.1|  442|Caenorhabditis elegans Hypothetical
           protein F38A6.1b protein.
          Length = 442

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
 Frame = +1

Query: 199 ARHVKHPGHGFKGWFWA*HERCSHF--DGCR*RREKN---DETANQRKREDIN 342
           AR    PG   KG FW  HE C +   +GC  RR+K     E    RK+ + N
Sbjct: 234 ARSPDKPG---KGSFWTLHEHCGNMFENGCYLRRQKRFKVKEREPSRKKRNAN 283


>Z92833-3|CAB07378.1|  506|Caenorhabditis elegans Hypothetical
           protein F38A6.1a protein.
          Length = 506

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
 Frame = +1

Query: 199 ARHVKHPGHGFKGWFWA*HERCSHF--DGCR*RREKN---DETANQRKREDIN 342
           AR    PG   KG FW  HE C +   +GC  RR+K     E    RK+ + N
Sbjct: 298 ARSPDKPG---KGSFWTLHEHCGNMFENGCYLRRQKRFKVKEREPSRKKRNAN 347


>U51163-1|AAA96319.1|  506|Caenorhabditis elegans fork
           head/HNF-3-like protein protein.
          Length = 506

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
 Frame = +1

Query: 199 ARHVKHPGHGFKGWFWA*HERCSHF--DGCR*RREKN---DETANQRKREDIN 342
           AR    PG   KG FW  HE C +   +GC  RR+K     E    RK+ + N
Sbjct: 298 ARSPDKPG---KGSFWTLHEHCGNMFENGCYLRRQKRFKVKEREPSRKKRNAN 347


>AF016685-1|AAG24144.2|  300|Caenorhabditis elegans Hypothetical
           protein F59E11.8 protein.
          Length = 300

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 13/53 (24%), Positives = 26/53 (49%)
 Frame = -2

Query: 554 NAQKFY*SSKESNRGPFYVSVSIKFA*YYKTFVSHKIRRKDL*HYYANFLMNW 396
           N  ++Y   K++ R  + ++  +K +  YKT +  K R + L   +  F + W
Sbjct: 236 NLHEYYVEQKDATRYSYRLTKILKISQQYKTLMEEKRRTEVLGDVFGAFRVKW 288


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,672,413
Number of Sequences: 27780
Number of extensions: 195035
Number of successful extensions: 427
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 427
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)