Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_A01
         (804 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF098504-5|AAC67410.3|  322|Caenorhabditis elegans Serpentine re...    30   1.7  
Z73103-3|CAA97423.1|  540|Caenorhabditis elegans Hypothetical pr...    28   6.8  
AL031635-11|CAA21038.3|  446|Caenorhabditis elegans Hypothetical...    28   9.0  

>AF098504-5|AAC67410.3|  322|Caenorhabditis elegans Serpentine
           receptor, class t protein62 protein.
          Length = 322

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 20/67 (29%), Positives = 33/67 (49%)
 Frame = -3

Query: 595 QSTYLCFPCKTLSISKSYFKLTIIGILNNKNKHCYFKNYSLILLIAL*NMYLRLAVRTM* 416
           Q   +C     + +S  ++ L II +LN K K+   KNY+  + I      ++  V T+ 
Sbjct: 182 QKIEMCIEIGGIFVSAFFYILIIIRLLNTKKKYLISKNYNAEVKI-----LIQATVITVY 236

Query: 415 CTFLLLL 395
           CT L +L
Sbjct: 237 CTVLNVL 243


>Z73103-3|CAA97423.1|  540|Caenorhabditis elegans Hypothetical
           protein C08F8.4 protein.
          Length = 540

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = +3

Query: 9   RLIITCYTNHSWIXLXISXQNHLLVSHYFTLFLPSFXRVLLHVYLGSILLK 161
           R +    T  +W  L +      L S  FTL   +F R + H +LG+ + K
Sbjct: 377 RTLAVYVTGAAWHGLAVGYYFSFLTSALFTLSAATFRRCMRHRFLGNSMHK 427


>AL031635-11|CAA21038.3|  446|Caenorhabditis elegans Hypothetical
           protein Y47D3B.3 protein.
          Length = 446

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +3

Query: 69  NHLLVSHYFTLFLPSFXRVLLHVY 140
           NH  +SHY TL L SF     H++
Sbjct: 68  NHTYISHYATLSLSSFSFFFRHIF 91


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,534,494
Number of Sequences: 27780
Number of extensions: 296335
Number of successful extensions: 548
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 548
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)