Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_P23
         (527 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50872-1|CAA90754.2| 1052|Caenorhabditis elegans Hypothetical pr...    29   2.1  
AL132865-3|CAB60603.1|  310|Caenorhabditis elegans Hypothetical ...    28   3.6  
AC006723-3|AAF59427.1|  881|Caenorhabditis elegans Hypothetical ...    28   4.8  
Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical p...    27   8.3  
Z29117-1|CAA82376.1|  659|Caenorhabditis elegans Hypothetical pr...    27   8.3  
AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical...    27   8.3  

>Z50872-1|CAA90754.2| 1052|Caenorhabditis elegans Hypothetical
           protein C05D12.2 protein.
          Length = 1052

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -3

Query: 384 YSVPEKNRCEGSIVEFDLYSQNFGCRRP 301
           +SVP+KNRC  +   +D Y    GCR P
Sbjct: 59  WSVPDKNRCACAPGWYDRYCGLRGCRPP 86


>AL132865-3|CAB60603.1|  310|Caenorhabditis elegans Hypothetical
           protein Y62E10A.4 protein.
          Length = 310

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 7   VACLYTLHKKSIWFLDMYFLNQS 75
           V C Y +H + + FLDMY L  +
Sbjct: 57  VVCTYLIHLRVLMFLDMYMLTST 79


>AC006723-3|AAF59427.1|  881|Caenorhabditis elegans Hypothetical
           protein Y19D10B.4 protein.
          Length = 881

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -3

Query: 384 YSVPEKNRCEGSIVEFDLYSQNFGCRRP 301
           ++VP+KNRC  +   +D Y    GCR P
Sbjct: 59  WAVPDKNRCACAPGWYDRYCGLRGCRPP 86


>Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical
           protein H38K22.1 protein.
          Length = 1570

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 227 ESLLHYYSKLFSLSHYSNSLKRTDT 301
           E+ LH  SK+F+ SH+ N L+   T
Sbjct: 754 EAALHVLSKIFANSHFRNKLENEAT 778


>Z29117-1|CAA82376.1|  659|Caenorhabditis elegans Hypothetical
           protein C48B4.1 protein.
          Length = 659

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 6/44 (13%)
 Frame = +2

Query: 380 LYPFLVKQRDRNTN------RKGTTKQLVDISCCPRGFLRFNQF 493
           L+PF V  RDRN+       R G     + ++C   GFL F+ +
Sbjct: 214 LHPFFVPIRDRNSYSVMSGVRVGDIGTKMGVNCVDNGFLAFDNY 257


>AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical
           protein H38K22.1 protein.
          Length = 1570

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 227 ESLLHYYSKLFSLSHYSNSLKRTDT 301
           E+ LH  SK+F+ SH+ N L+   T
Sbjct: 754 EAALHVLSKIFANSHFRNKLENEAT 778


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,890,241
Number of Sequences: 27780
Number of extensions: 234431
Number of successful extensions: 632
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 632
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)