Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_P19
(860 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41105-3|AAX88810.1| 514|Caenorhabditis elegans Lysyl (k) trna ... 362 e-100
U41105-2|AAK68395.1| 596|Caenorhabditis elegans Lysyl (k) trna ... 362 e-100
U41105-1|AAA82396.1| 572|Caenorhabditis elegans Lysyl (k) trna ... 362 e-100
Z71262-12|CAA95808.1| 545|Caenorhabditis elegans Hypothetical p... 44 1e-04
Z81497-3|CAB04081.2| 593|Caenorhabditis elegans Hypothetical pr... 42 4e-04
AL021474-6|CAI79259.1| 261|Caenorhabditis elegans Hypothetical ... 42 6e-04
Z19152-1|CAA79536.1| 531|Caenorhabditis elegans Hypothetical pr... 40 0.003
M22363-1|AAA28158.1| 467|Caenorhabditis elegans protein ( C.ele... 33 0.26
L10990-6|AAB59176.1| 467|Caenorhabditis elegans Uncoordinated p... 33 0.26
AL161712-18|CAC70140.1| 448|Caenorhabditis elegans Hypothetical... 30 2.4
AL132904-4|CAC35836.2| 582|Caenorhabditis elegans Hypothetical ... 29 3.2
AF039041-8|AAB94189.2| 448|Caenorhabditis elegans Hypothetical ... 29 5.6
U41508-5|AAG00025.2| 511|Caenorhabditis elegans Hypothetical pr... 28 7.4
M22363-2|AAA28159.1| 429|Caenorhabditis elegans protein ( C.ele... 28 7.4
L10990-5|AAB59175.1| 429|Caenorhabditis elegans Uncoordinated p... 28 7.4
AL132904-24|CAC35834.2| 459|Caenorhabditis elegans Hypothetical... 28 7.4
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical... 28 7.4
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical... 28 7.4
AF326938-1|AAG49388.1| 511|Caenorhabditis elegans XG314 protein. 28 7.4
U70854-4|AAP40536.1| 452|Caenorhabditis elegans Hypothetical pr... 28 9.8
U70854-3|AAP40537.1| 450|Caenorhabditis elegans Hypothetical pr... 28 9.8
U29614-8|AAA68812.2| 395|Caenorhabditis elegans Hypothetical pr... 28 9.8
AF353303-1|AAK32717.1| 367|Caenorhabditis elegans GATA-like tra... 28 9.8
AF100657-1|AAC68957.3| 367|Caenorhabditis elegans Erythroid-lik... 28 9.8
AF026214-7|AAP68943.1| 640|Caenorhabditis elegans Hypothetical ... 28 9.8
>U41105-3|AAX88810.1| 514|Caenorhabditis elegans Lysyl (k) trna
synthetase protein1, isoform c protein.
Length = 514
Score = 362 bits (890), Expect = e-100
Identities = 160/257 (62%), Positives = 197/257 (76%), Gaps = 1/257 (0%)
Frame = -1
Query: 857 LTHNPEFTTCEFYMAYADYNDLMTITESILXGMVQSIHGSYKVKYHPEGPEGKEI-EIDF 681
LTHNPEFTTCEFYMAYADY D++ +TE +L MV SI G+YK++YHP GP + + E+DF
Sbjct: 250 LTHNPEFTTCEFYMAYADYEDVIQLTEDLLSSMVMSIKGTYKIEYHPNGPNTEPVYEVDF 309
Query: 680 TPPFARVPMMATLERVLNVKLPAPDKLDTPEANDFLNNLCNTHQIECSPPRTTARLLDKL 501
TPPF RV M L L LP P L T EA + + LC + ++CS PRTTARLLDKL
Sbjct: 310 TPPFKRVHMYDGLAEKLGATLPDPSTLHTEEAREVFDKLCRDNNVDCSAPRTTARLLDKL 369
Query: 500 VSVFLEEECINPTFILDHPQIMSPLSKYHRDVPGLTERFEVYVAKKEICNAYTELNDPAT 321
V +LE I+PTF++ HPQIMSPL+K+HR +PGLTERFE++ +EI NAYTELNDP T
Sbjct: 370 VGEYLESTFISPTFLIGHPQIMSPLAKWHRSIPGLTERFELFAVTREIANAYTELNDPIT 429
Query: 320 QRERFEEQAKNRAAGDDETPPTDEAFCTALEYGLPPTGGWGLGVDRLTMFLTDSNNIKEV 141
QR+RFE+QAK++ AGDDE DE FC ALEYGLPPTGGWG+G+DRL+M LTD+NNIKEV
Sbjct: 430 QRQRFEQQAKDKDAGDDEAQMIDETFCNALEYGLPPTGGWGMGIDRLSMILTDNNNIKEV 489
Query: 140 LLFPAMKPDDPNKNNTE 90
LLFPAM+P+D + T+
Sbjct: 490 LLFPAMRPEDGTEKKTD 506
>U41105-2|AAK68395.1| 596|Caenorhabditis elegans Lysyl (k) trna
synthetase protein1, isoform b protein.
Length = 596
Score = 362 bits (890), Expect = e-100
Identities = 160/257 (62%), Positives = 197/257 (76%), Gaps = 1/257 (0%)
Frame = -1
Query: 857 LTHNPEFTTCEFYMAYADYNDLMTITESILXGMVQSIHGSYKVKYHPEGPEGKEI-EIDF 681
LTHNPEFTTCEFYMAYADY D++ +TE +L MV SI G+YK++YHP GP + + E+DF
Sbjct: 332 LTHNPEFTTCEFYMAYADYEDVIQLTEDLLSSMVMSIKGTYKIEYHPNGPNTEPVYEVDF 391
Query: 680 TPPFARVPMMATLERVLNVKLPAPDKLDTPEANDFLNNLCNTHQIECSPPRTTARLLDKL 501
TPPF RV M L L LP P L T EA + + LC + ++CS PRTTARLLDKL
Sbjct: 392 TPPFKRVHMYDGLAEKLGATLPDPSTLHTEEAREVFDKLCRDNNVDCSAPRTTARLLDKL 451
Query: 500 VSVFLEEECINPTFILDHPQIMSPLSKYHRDVPGLTERFEVYVAKKEICNAYTELNDPAT 321
V +LE I+PTF++ HPQIMSPL+K+HR +PGLTERFE++ +EI NAYTELNDP T
Sbjct: 452 VGEYLESTFISPTFLIGHPQIMSPLAKWHRSIPGLTERFELFAVTREIANAYTELNDPIT 511
Query: 320 QRERFEEQAKNRAAGDDETPPTDEAFCTALEYGLPPTGGWGLGVDRLTMFLTDSNNIKEV 141
QR+RFE+QAK++ AGDDE DE FC ALEYGLPPTGGWG+G+DRL+M LTD+NNIKEV
Sbjct: 512 QRQRFEQQAKDKDAGDDEAQMIDETFCNALEYGLPPTGGWGMGIDRLSMILTDNNNIKEV 571
Query: 140 LLFPAMKPDDPNKNNTE 90
LLFPAM+P+D + T+
Sbjct: 572 LLFPAMRPEDGTEKKTD 588
>U41105-1|AAA82396.1| 572|Caenorhabditis elegans Lysyl (k) trna
synthetase protein1, isoform a protein.
Length = 572
Score = 362 bits (890), Expect = e-100
Identities = 160/257 (62%), Positives = 197/257 (76%), Gaps = 1/257 (0%)
Frame = -1
Query: 857 LTHNPEFTTCEFYMAYADYNDLMTITESILXGMVQSIHGSYKVKYHPEGPEGKEI-EIDF 681
LTHNPEFTTCEFYMAYADY D++ +TE +L MV SI G+YK++YHP GP + + E+DF
Sbjct: 308 LTHNPEFTTCEFYMAYADYEDVIQLTEDLLSSMVMSIKGTYKIEYHPNGPNTEPVYEVDF 367
Query: 680 TPPFARVPMMATLERVLNVKLPAPDKLDTPEANDFLNNLCNTHQIECSPPRTTARLLDKL 501
TPPF RV M L L LP P L T EA + + LC + ++CS PRTTARLLDKL
Sbjct: 368 TPPFKRVHMYDGLAEKLGATLPDPSTLHTEEAREVFDKLCRDNNVDCSAPRTTARLLDKL 427
Query: 500 VSVFLEEECINPTFILDHPQIMSPLSKYHRDVPGLTERFEVYVAKKEICNAYTELNDPAT 321
V +LE I+PTF++ HPQIMSPL+K+HR +PGLTERFE++ +EI NAYTELNDP T
Sbjct: 428 VGEYLESTFISPTFLIGHPQIMSPLAKWHRSIPGLTERFELFAVTREIANAYTELNDPIT 487
Query: 320 QRERFEEQAKNRAAGDDETPPTDEAFCTALEYGLPPTGGWGLGVDRLTMFLTDSNNIKEV 141
QR+RFE+QAK++ AGDDE DE FC ALEYGLPPTGGWG+G+DRL+M LTD+NNIKEV
Sbjct: 488 QRQRFEQQAKDKDAGDDEAQMIDETFCNALEYGLPPTGGWGMGIDRLSMILTDNNNIKEV 547
Query: 140 LLFPAMKPDDPNKNNTE 90
LLFPAM+P+D + T+
Sbjct: 548 LLFPAMRPEDGTEKKTD 564
>Z71262-12|CAA95808.1| 545|Caenorhabditis elegans Hypothetical
protein F22D6.3a protein.
Length = 545
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/34 (50%), Positives = 27/34 (79%)
Frame = -1
Query: 230 EYGLPPTGGWGLGVDRLTMFLTDSNNIKEVLLFP 129
+YG P GG+GLG++R +LTD+N+I++V L+P
Sbjct: 504 KYGSVPHGGYGLGLERFICWLTDTNHIRDVCLYP 537
>Z81497-3|CAB04081.2| 593|Caenorhabditis elegans Hypothetical
protein F10C2.6 protein.
Length = 593
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Frame = -1
Query: 260 PTDEA--FCTALEYGLPPTGGWGLGVDRLTMFLTDSNN----IKEVLLFPAMK 120
PTDE AL +G PP GG+ LG+DR LT N +++V+ FP K
Sbjct: 510 PTDEMEHLLNALSHGAPPHGGFALGLDRFVAMLTSDGNPLTPVRDVIAFPKTK 562
>AL021474-6|CAI79259.1| 261|Caenorhabditis elegans Hypothetical
protein Y32F6A.6 protein.
Length = 261
Score = 41.9 bits (94), Expect = 6e-04
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = -1
Query: 845 PEFTTCEFYMAYADYNDLMTITESILXGMVQSIHGSYKVKYHPEGPEGKEIEIDFTPPFA 666
P T E M + ND + E ++ +V SI S+ +KY + +EIDFTPPF
Sbjct: 165 PLVLTAEISMCNINLNDFQDLVEELITTLVYSIKRSFLIKY-------RSVEIDFTPPFK 217
Query: 665 RV 660
R+
Sbjct: 218 RL 219
>Z19152-1|CAA79536.1| 531|Caenorhabditis elegans Hypothetical
protein B0464.1 protein.
Length = 531
Score = 39.5 bits (88), Expect = 0.003
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = -1
Query: 251 EAFCTALEYGLPPTGGWGLGVDRLTMFLTDSNNIKEVLLFP 129
+++ + +YG PP G G+G++R+TM +NI+ LFP
Sbjct: 483 QSYIDSFKYGCPPHAGGGIGLERVTMLFLGLHNIRLASLFP 523
>M22363-1|AAA28158.1| 467|Caenorhabditis elegans protein (
C.elegans unc-86 geneencoding two alternative proteins,
complete cds. ).
Length = 467
Score = 33.1 bits (72), Expect = 0.26
Identities = 27/119 (22%), Positives = 44/119 (36%)
Frame = -1
Query: 446 PQIMSPLSKYHRDVPGLTERFEVYVAKKEICNAYTELNDPATQRERFEEQAKNRAAGDDE 267
PQ+ +PL + H D+ + F N Y L P++ E F+ + DD+
Sbjct: 160 PQLTNPLMRPH-DMFSYSNYFSGIHDTSAATNIYQGL--PSSS-EPFDASVVVPTSSDDQ 215
Query: 266 TPPTDEAFCTALEYGLPPTGGWGLGVDRLTMFLTDSNNIKEVLLFPAMKPDDPNKNNTE 90
P + YG PP + + T + SNN+ + P D + E
Sbjct: 216 MTPLQQVMAMQQSYGAPPPFQYNMTHPFSTTSIASSNNLARYPIAPPTSDMDTDPRQLE 274
>L10990-6|AAB59176.1| 467|Caenorhabditis elegans Uncoordinated
protein 86, isoform b protein.
Length = 467
Score = 33.1 bits (72), Expect = 0.26
Identities = 27/119 (22%), Positives = 44/119 (36%)
Frame = -1
Query: 446 PQIMSPLSKYHRDVPGLTERFEVYVAKKEICNAYTELNDPATQRERFEEQAKNRAAGDDE 267
PQ+ +PL + H D+ + F N Y L P++ E F+ + DD+
Sbjct: 160 PQLTNPLMRPH-DMFSYSNYFSGIHDTSAATNIYQGL--PSSS-EPFDASVVVPTSSDDQ 215
Query: 266 TPPTDEAFCTALEYGLPPTGGWGLGVDRLTMFLTDSNNIKEVLLFPAMKPDDPNKNNTE 90
P + YG PP + + T + SNN+ + P D + E
Sbjct: 216 MTPLQQVMAMQQSYGAPPPFQYNMTHPFSTTSIASSNNLARYPIAPPTSDMDTDPRQLE 274
>AL161712-18|CAC70140.1| 448|Caenorhabditis elegans Hypothetical
protein Y66D12A.23 protein.
Length = 448
Score = 29.9 bits (64), Expect = 2.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -1
Query: 224 GLPPTGGWGLGVDRLTMFL 168
G PPTGG+G+G +R+ +L
Sbjct: 379 GQPPTGGFGIGFERMLQYL 397
>AL132904-4|CAC35836.2| 582|Caenorhabditis elegans Hypothetical
protein Y111B2A.8 protein.
Length = 582
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -1
Query: 488 LEEECINPTFILDHPQIMSPLSKYHRDVP 402
L+ + N T+IL H +IM LS Y RD+P
Sbjct: 337 LDRKTGNITYILTHKRIMKFLSLYMRDLP 365
>AF039041-8|AAB94189.2| 448|Caenorhabditis elegans Hypothetical
protein W03F8.2 protein.
Length = 448
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = -1
Query: 542 CSPPRTTARLLDKLVSVFLEEE--CINPTFILDHPQIMSPLSKYHRDV 405
C PPRT + D L++ + + C + TF L HP + H DV
Sbjct: 273 CEPPRTFESISD-LLNYYTKNHGGCASGTFQLKHPILQQSWEFMHSDV 319
>U41508-5|AAG00025.2| 511|Caenorhabditis elegans Hypothetical
protein W01C8.5a protein.
Length = 511
Score = 28.3 bits (60), Expect = 7.4
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Frame = -1
Query: 275 DDETPPTDEAF-CTALEYGLPPTGGWGLGVDRLTMFLTDSNNIKEVLLFP--AMKPDDPN 105
D + PT E EYG+ P G + DR+ + + + + I E F + K D
Sbjct: 75 DTKDVPTREGIKAHTFEYGITPLGSFPEDNDRVVVHVPEKHRIDEFKSFSIYSFKTDKSM 134
Query: 104 KNNTEEENVGVQTSV 60
+ ENV + SV
Sbjct: 135 ASVVFPENVKIPKSV 149
>M22363-2|AAA28159.1| 429|Caenorhabditis elegans protein (
C.elegans unc-86 geneencoding two alternative proteins,
complete cds. ).
Length = 429
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/75 (21%), Positives = 26/75 (34%)
Frame = -1
Query: 314 ERFEEQAKNRAAGDDETPPTDEAFCTALEYGLPPTGGWGLGVDRLTMFLTDSNNIKEVLL 135
E F+ + DD+ P + YG PP + + T + SNN+ +
Sbjct: 162 EPFDASVVVPTSSDDQMTPLQQVMAMQQSYGAPPPFQYNMTHPFSTTSIASSNNLARYPI 221
Query: 134 FPAMKPDDPNKNNTE 90
P D + E
Sbjct: 222 APPTSDMDTDPRQLE 236
>L10990-5|AAB59175.1| 429|Caenorhabditis elegans Uncoordinated
protein 86, isoform a protein.
Length = 429
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/75 (21%), Positives = 26/75 (34%)
Frame = -1
Query: 314 ERFEEQAKNRAAGDDETPPTDEAFCTALEYGLPPTGGWGLGVDRLTMFLTDSNNIKEVLL 135
E F+ + DD+ P + YG PP + + T + SNN+ +
Sbjct: 162 EPFDASVVVPTSSDDQMTPLQQVMAMQQSYGAPPPFQYNMTHPFSTTSIASSNNLARYPI 221
Query: 134 FPAMKPDDPNKNNTE 90
P D + E
Sbjct: 222 APPTSDMDTDPRQLE 236
>AL132904-24|CAC35834.2| 459|Caenorhabditis elegans Hypothetical
protein Y111B2A.4 protein.
Length = 459
Score = 28.3 bits (60), Expect = 7.4
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -1
Query: 365 KEICNAYTELNDPATQRERFEEQ-AKNRAAGDDETPPTDEAFCTALEY 225
KE+ NAYTELN+ + E F+EQ + A +D D +EY
Sbjct: 300 KELANAYTELNE---EFEGFKEQHTATQNANNDLNRRIDSLKANLIEY 344
>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
protein Y57A10A.18b protein.
Length = 1459
Score = 28.3 bits (60), Expect = 7.4
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -1
Query: 413 RDVPGLTER-FEVYVAKKEICNAYTELNDPATQRERFEEQAKNRAAGDDETPPTDEA 246
RD+ + ++ E+ +KE A EL D Q+E+FE+ K A G T T+ A
Sbjct: 1000 RDLQTIRQQSIEIVEREKERDRARKELEDVTRQKEKFEKDKK--AVGGQLTSMTERA 1054
>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
protein Y57A10A.18a protein.
Length = 1456
Score = 28.3 bits (60), Expect = 7.4
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -1
Query: 413 RDVPGLTER-FEVYVAKKEICNAYTELNDPATQRERFEEQAKNRAAGDDETPPTDEA 246
RD+ + ++ E+ +KE A EL D Q+E+FE+ K A G T T+ A
Sbjct: 1000 RDLQTIRQQSIEIVEREKERDRARKELEDVTRQKEKFEKDKK--AVGGQLTSMTERA 1054
>AF326938-1|AAG49388.1| 511|Caenorhabditis elegans XG314 protein.
Length = 511
Score = 28.3 bits (60), Expect = 7.4
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Frame = -1
Query: 275 DDETPPTDEAF-CTALEYGLPPTGGWGLGVDRLTMFLTDSNNIKEVLLFP--AMKPDDPN 105
D + PT E EYG+ P G + DR+ + + + + I E F + K D
Sbjct: 75 DTKDVPTREGIKAHTFEYGITPLGSFPEDNDRVVVHVPEKHRIDEFKSFSIYSFKTDKSM 134
Query: 104 KNNTEEENVGVQTSV 60
+ ENV + SV
Sbjct: 135 ASVVFPENVKIPKSV 149
>U70854-4|AAP40536.1| 452|Caenorhabditis elegans Hypothetical
protein F38A5.2a protein.
Length = 452
Score = 27.9 bits (59), Expect = 9.8
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Frame = -1
Query: 326 ATQRERFEEQAKNRAAGDDETPPTDEAFCTALEYGLPPTGGWGLGVDRLTMFLTDSNNIK 147
A F+E + A D E EA P GG+ G R F+ ++N +
Sbjct: 66 ADSTSNFDEHVGDDAELDYELEQAPEATEDGAVVNNPVCGGYHFGRKRADDFVPNANTV- 124
Query: 146 EVLLFP---AMKPDDPNKNNTEEE 84
VL +P A+ P +P ++++EE
Sbjct: 125 TVLKWPTNLAIPPRNPVLSDSDEE 148
>U70854-3|AAP40537.1| 450|Caenorhabditis elegans Hypothetical
protein F38A5.2b protein.
Length = 450
Score = 27.9 bits (59), Expect = 9.8
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Frame = -1
Query: 326 ATQRERFEEQAKNRAAGDDETPPTDEAFCTALEYGLPPTGGWGLGVDRLTMFLTDSNNIK 147
A F+E + A D E EA P GG+ G R F+ ++N +
Sbjct: 64 ADSTSNFDEHVGDDAELDYELEQAPEATEDGAVVNNPVCGGYHFGRKRADDFVPNANTV- 122
Query: 146 EVLLFP---AMKPDDPNKNNTEEE 84
VL +P A+ P +P ++++EE
Sbjct: 123 TVLKWPTNLAIPPRNPVLSDSDEE 146
>U29614-8|AAA68812.2| 395|Caenorhabditis elegans Hypothetical
protein F18E9.7 protein.
Length = 395
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -1
Query: 347 YTELNDPATQRERFEEQAKNRAAGDDETPPTDE 249
Y LN+P+T+RE E ++A +D+T D+
Sbjct: 181 YQPLNNPSTKREALEFLKHLKSASEDKTLTVDD 213
>AF353303-1|AAK32717.1| 367|Caenorhabditis elegans GATA-like
transcription factorELT-6 protein.
Length = 367
Score = 27.9 bits (59), Expect = 9.8
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Frame = -1
Query: 365 KEICNA---YTELND---PATQRERFEEQAKNRAAGDDETPPTDEAFCTALEYGLPPTGG 204
K +CNA Y L+ P R+ F +Q R +DE P T +A + GLP
Sbjct: 283 KLVCNACGLYYRLHRTHRPVHMRKDFIQQRFRRRMREDENPATSQAAVFSQLLGLPSMAN 342
Query: 203 WGLGVDRLTMFLTDSNNIKE 144
G + LT FL N + +
Sbjct: 343 G--GANALT-FLEQINQLNQ 359
>AF100657-1|AAC68957.3| 367|Caenorhabditis elegans Erythroid-like
transcription factorfamily protein 6 protein.
Length = 367
Score = 27.9 bits (59), Expect = 9.8
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Frame = -1
Query: 365 KEICNA---YTELND---PATQRERFEEQAKNRAAGDDETPPTDEAFCTALEYGLPPTGG 204
K +CNA Y L+ P R+ F +Q R +DE P T +A + GLP
Sbjct: 283 KLVCNACGLYYRLHRTHRPVHMRKDFIQQRFRRRMREDENPATSQAAVFSQLLGLPSMAN 342
Query: 203 WGLGVDRLTMFLTDSNNIKE 144
G + LT FL N + +
Sbjct: 343 G--GANALT-FLEQINQLNQ 359
>AF026214-7|AAP68943.1| 640|Caenorhabditis elegans Hypothetical
protein F52H2.1 protein.
Length = 640
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -2
Query: 94 QKKRMWVYKHQFRTELTNLLFKKMFCNN 11
Q MWV H TEL N+ F KM N
Sbjct: 363 QVTTMWVNIHNHATELKNIAFLKMLTPN 390
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,508,625
Number of Sequences: 27780
Number of extensions: 500739
Number of successful extensions: 1308
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1304
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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