Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_P18
         (766 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q05FF8 Cluster: Putative uncharacterized protein; n=1; ...    40   0.089
UniRef50_Q30RM8 Cluster: GCN5-related N-acetyltransferase; n=5; ...    33   7.8  

>UniRef50_Q05FF8 Cluster: Putative uncharacterized protein; n=1;
           Candidatus Carsonella ruddii PV|Rep: Putative
           uncharacterized protein - Carsonella ruddii (strain PV)
          Length = 337

 Score = 39.5 bits (88), Expect = 0.089
 Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
 Frame = +3

Query: 180 WHYLISYITFRRRKEIKTLKVPILLIS-KFDILYLKVPNRSKLVAFIKS*ILHTQKHFST 356
           + Y+++   F   KEIK+ K  IL I+ K + L  K  +  K  +F    ++    +F+ 
Sbjct: 227 YFYIVTNFKFNNIKEIKSNKNTILKITLKKNFLNFKFLDELKTFSFNIKILIKNISYFTV 286

Query: 357 VLTA*KFLAL*TFYRIKILQIINSKKEEQIV 449
            +   KFL++  +Y+ ++L I  +KKE++I+
Sbjct: 287 FVNLKKFLSIINYYKNEVL-IFYTKKEKKII 316


>UniRef50_Q30RM8 Cluster: GCN5-related N-acetyltransferase; n=5;
           Campylobacterales|Rep: GCN5-related N-acetyltransferase
           - Thiomicrospira denitrificans (strain ATCC 33889 / DSM
           1351)
          Length = 153

 Score = 33.1 bits (72), Expect = 7.8
 Identities = 12/33 (36%), Positives = 23/33 (69%)
 Frame = +2

Query: 281 KSTK*VKVGGIHKILDITYTETFFNSIDSLEIP 379
           K+T   ++ G+ K+L +TY ++FF ++  +EIP
Sbjct: 90  KATDEAQILGLQKVLSLTYKQSFFENLGFIEIP 122


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 626,313,470
Number of Sequences: 1657284
Number of extensions: 10398688
Number of successful extensions: 15362
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15358
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63792713725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)