Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_P18
         (766 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    23   2.0  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    23   2.0  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    23   2.0  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   3.5  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   8.2  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   8.2  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
 Frame = -2

Query: 645 KLFITRIIYFTL*VLSYET-QTPS*LFSKQANL*LNSLSDGLKLFCNS*LYSNPFSISHL 469
           +L +   ++ +L ++ Y   QT   + + + N   NS S+G   F     YS+ FS+   
Sbjct: 152 RLNVLLAVFMSLALIEYILMQTNKLVLALECN---NSTSEGFDYFFGKMSYSHIFSLMDY 208

Query: 468 NL-PTITLQF 442
           N+   + LQF
Sbjct: 209 NIVMALVLQF 218


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
 Frame = -2

Query: 645 KLFITRIIYFTL*VLSYET-QTPS*LFSKQANL*LNSLSDGLKLFCNS*LYSNPFSISHL 469
           +L +   ++ +L ++ Y   QT   + + + N   NS S+G   F     YS+ FS+   
Sbjct: 152 RLNVLLAVFMSLALIEYILMQTNKLVLALECN---NSTSEGFDYFFGKMSYSHIFSLMDY 208

Query: 468 NL-PTITLQF 442
           N+   + LQF
Sbjct: 209 NIVMALVLQF 218


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
 Frame = -2

Query: 645 KLFITRIIYFTL*VLSYET-QTPS*LFSKQANL*LNSLSDGLKLFCNS*LYSNPFSISHL 469
           +L +   ++ +L ++ Y   QT   + + + N   NS S+G   F     YS+ FS+   
Sbjct: 152 RLNVLLAVFMSLALIEYILMQTNKLVLALECN---NSTSEGFDYFFGKMSYSHIFSLMDY 208

Query: 468 NL-PTITLQF 442
           N+   + LQF
Sbjct: 209 NIVMALVLQF 218


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = -1

Query: 286 TFK*RISNLEISKMGTLRVFIS 221
           T+K  ++N   ++MGT R+F++
Sbjct: 483 TYKITVNNSGNNRMGTCRIFLA 504


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 255 ISKFDILYLKVPNRSKLVA 311
           + KF+ L LK PN   LVA
Sbjct: 79  LKKFNALKLKNPNLKTLVA 97


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 527 PSDKEFSYKLACFENNYE 580
           P  +E  ++L  F+N YE
Sbjct: 313 PEQEELIHRLVYFQNEYE 330


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,997
Number of Sequences: 336
Number of extensions: 2934
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)