Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_P15
(738 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 29 0.52
SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces p... 29 0.69
SPCC1795.08c |||histone acetyltransferase complex subunit |Schiz... 29 0.69
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 29 0.91
SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1 |Schizosaccharo... 29 0.91
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 28 1.2
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 28 1.2
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 28 1.2
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 27 2.1
SPCC1442.17c ||SPCC285.02c|DUF292 family protein|Schizosaccharom... 27 2.8
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ... 27 2.8
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 27 3.7
SPBC18E5.12c |mas2|SPBC23G7.02c|mitochondrial processing peptida... 26 4.9
SPCC1322.12c |bub1||serine/threonine protein kinase Bub1|Schizos... 26 4.9
SPBC725.01 |||aspartate aminotransferase|Schizosaccharomyces pom... 26 6.4
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 6.4
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 25 8.5
SPBC19G7.08c |||arrestin|Schizosaccharomyces pombe|chr 2|||Manual 25 8.5
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 25 8.5
SPCC320.10 |srp72||signal recognition particle subunit Srp72|Sch... 25 8.5
SPAC19D5.03 |cid1||poly|Schizosaccharomyces pombe|chr 1|||Manual 25 8.5
SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces pomb... 25 8.5
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 29.5 bits (63), Expect = 0.52
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = -1
Query: 366 DIQEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNS 217
+ +ES++ D ++ E D + ++ E + S SDN +SD NS
Sbjct: 351 EANDESSEDDDEDNNTDEANEDAQSNVSDESPKGEGSSHSDNVVLSDGNS 400
>SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 275
Score = 29.1 bits (62), Expect = 0.69
Identities = 19/72 (26%), Positives = 36/72 (50%)
Frame = -1
Query: 354 ESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSELPQPKVLNANEEP 175
E Q + + E+ +++P + E + Q + +N ++S E QP+V A+E+P
Sbjct: 208 EVEQQSAPNSNGNEEVNNLEPVGQNE--SKQEPPKEENSNVSQEQPEQAQPEVSAASEQP 265
Query: 174 EIEKKDDPTSKE 139
E +PT+ E
Sbjct: 266 E----SNPTTTE 273
>SPCC1795.08c |||histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 985
Score = 29.1 bits (62), Expect = 0.69
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = -1
Query: 279 EKATNQVSLESDNYSISDVNSELPQPKVLNANEEPEIEKKDDPTS--KEIERKATEDPE 109
E + SLE I S +P P+ ++ N + E ++ +PT+ KE+E A + E
Sbjct: 122 ETPLKETSLELSEEEIITSKSPIPSPETIHKNIDVEEKETIEPTTPVKEVETTAHAEEE 180
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 28.7 bits (61), Expect = 0.91
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = -1
Query: 363 IQEESNQSDSNKEDSQEQALDIKPSME--PEKATNQVSLESDNYSISDVNSELPQPKVLN 190
+ ++S S++ DS+E+ D+ + PE +N SL + + N E
Sbjct: 3963 VTKDSVVSENENSDSEEENQDLDEEVNDIPEDLSN--SLNEKLWD--EPNEEDLLETEQK 4018
Query: 189 ANEEPEIEKKDDPTSKEIERKATEDPE 109
+NE+ + D SKE + KA ED +
Sbjct: 4019 SNEQSAANNESDLVSKEDDNKALEDKD 4045
Score = 26.6 bits (56), Expect = 3.7
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = -1
Query: 378 DCQIDIQEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSE 214
+ Q DIQE ++Q ED + D+K + + LE + +D N E
Sbjct: 4064 EIQPDIQENNSQPPPENEDHLDLPEDLKLDEKEGDVSKDSDLEDMDMEAADENKE 4118
>SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1183
Score = 28.7 bits (61), Expect = 0.91
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = -1
Query: 366 DIQEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSI-SDVNSELPQPKVLN 190
D + +S + D DS+E + D S E K TN+ S + ++ DV + + K+
Sbjct: 225 DPEYDSAEEDYLSTDSEEFSEDSDNSSEENKDTNEPSTKDAEKTVPEDVVNLRSEQKLQP 284
Query: 189 ANEEPEIEKKD 157
+ PE E +D
Sbjct: 285 SFGHPEFENED 295
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 28.3 bits (60), Expect = 1.2
Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Frame = -1
Query: 360 QEESNQ---SDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSELPQPKVLN 190
+EES S+S++E+S+ + +++ + A ++ S ESD+ S S+ E +
Sbjct: 44 EEESASSSESESSEEESESEESEVEVPKKKAVAASEDS-ESDSES-SEEEEETESEEDSE 101
Query: 189 ANEEPEIEKKDDPTSKEIERKATEDPEGNK 100
++E E E + + S+E E E +
Sbjct: 102 VSDESESESESESESEEESESEEESDESER 131
>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 28.3 bits (60), Expect = 1.2
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = -1
Query: 327 EDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNS-ELPQPKV-LNANEEPEIEKKDD 154
E+ + D + E E A S+ES++ + + N E Q V LNA+ +IEK D
Sbjct: 34 EELPQDEDDYEQEEENEDADQNTSVESESEELDNENEDERVQKSVNLNASSTSDIEKFSD 93
Query: 153 PTSKEIERKATED 115
E +KA ++
Sbjct: 94 LQLSENIQKAIKE 106
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 28.3 bits (60), Expect = 1.2
Identities = 18/68 (26%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = -1
Query: 354 ESNQSDSNKEDSQEQALDIK-PSMEPEKATNQVSLESDNYSISDVNSELPQPKVLNANEE 178
E+N ++S+ + S + +DI+ PS EP++ + S ++ S+ +V PQ + + +
Sbjct: 59 ENNIANSSSQQSVSE-IDIQLPSSEPKEGVKEESNLIESNSLDNVQEINPQNTIGDKSAH 117
Query: 177 PEIEKKDD 154
E E +D
Sbjct: 118 TEEESSND 125
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 27.5 bits (58), Expect = 2.1
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = -1
Query: 279 EKATNQVSLESDNYSISDVNSELPQPKVLNANEEPEIEKKDDPTSKEIERKAT 121
EK+++ ++ D S+ VN L Q + N + +++ KE+E+K T
Sbjct: 103 EKSSSYDTVLHDCSSLKSVNEALKQAQDQNLKQTAQLQNLLSDKEKEVEKKIT 155
>SPCC1442.17c ||SPCC285.02c|DUF292 family
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 271
Score = 27.1 bits (57), Expect = 2.8
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = -1
Query: 363 IQEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSELP-QPKVLNA 187
++EE+ Q D K + + + + +TN SL+S NY LP P + ++
Sbjct: 201 LKEENTQEDDEKVNGNLANISKRAEPQNNGSTNASSLQSSNY--------LPTNPTLTHS 252
Query: 186 NEEPEIEK 163
N+ P E+
Sbjct: 253 NKAPSFEE 260
>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 528
Score = 27.1 bits (57), Expect = 2.8
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = -1
Query: 255 LESDNYSISDVNSELPQPKVLNANEEPEIEKKDDPTSKEIERKATEDPEG 106
+ + Y VN E+ PK+L+ +E +E+ D + R+ P G
Sbjct: 419 VNTSRYGNFYVNFEVTIPKILSPHERSLLEQLADALNDSTARRTQSSPSG 468
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 26.6 bits (56), Expect = 3.7
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = -1
Query: 351 SNQSDSNKEDSQ-EQALDIKPSMEPEKATNQVSLESDNYSISDVNSELPQPKVLNANEEP 175
+N+ S+ DS E D + + N+V ++N D ++ + +ANEE
Sbjct: 54 TNEKQSSPVDSHNESPNDTTINKGEDGNENEVDNVNNNDKKEDEDNVEENEEEADANEEE 113
Query: 174 EIEKKDDPTSKEIE 133
E +++DD +E E
Sbjct: 114 EEDEEDDEEDEEDE 127
>SPBC18E5.12c |mas2|SPBC23G7.02c|mitochondrial processing peptidase
complex alpha subunit Mas2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 494
Score = 26.2 bits (55), Expect = 4.9
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Frame = -1
Query: 291 SMEPEKATNQV------SLESDNYSISDVNSELPQPKVLNANEEPEIEKKDDPTSKEIER 130
S E E+A NQ+ +LES S+ D+ ++ L + IEK D T ++ R
Sbjct: 390 SEETERAKNQLKSSLLMNLESRMISLEDLGRQIQTQNGLYITPKEMIEKIDALTPSDLSR 449
Query: 129 KATEDPEGN 103
A GN
Sbjct: 450 VARRVLTGN 458
>SPCC1322.12c |bub1||serine/threonine protein kinase
Bub1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1044
Score = 26.2 bits (55), Expect = 4.9
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Frame = -1
Query: 363 IQEESNQSDSNKED----SQEQALDIKPSMEPEK-ATNQVSLESDNYSISDVNSELPQPK 199
++ + N S+S SQE+ LD PS+ P K +++ + N S S+ K
Sbjct: 425 LKNDENSSNSGATSLTGRSQEEHLDFIPSLTPSKNYPSKIYSPNKNLDFSHTASKAETYK 484
Query: 198 VLNANEEPEIEKKDDPTSKEIERKATED 115
N+NE + K++ P S+ + E+
Sbjct: 485 --NSNELENV-KREQPFSELLPSTLQEE 509
>SPBC725.01 |||aspartate aminotransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 437
Score = 25.8 bits (54), Expect = 6.4
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = -1
Query: 675 DTSNITLVIPEIKVDDTEMIEQKLDEQ 595
D + V+P ++ +TE++ QKLD++
Sbjct: 76 DDAGKPYVLPSVRQAETELLSQKLDKE 102
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.8 bits (54), Expect = 6.4
Identities = 13/76 (17%), Positives = 29/76 (38%)
Frame = -1
Query: 384 KPDCQIDIQEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSELPQ 205
K +I QEE D+ ++ +P EPE + +N + + + +
Sbjct: 355 KSQGEISEQEEDEYDDAESDEMHSPYSTHEPESEPEDQDEPSEKDDENKDVEEEQEQEQE 414
Query: 204 PKVLNANEEPEIEKKD 157
+ ++ E I ++
Sbjct: 415 EEQIDPEEAKRIALRE 430
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase
Hrp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1388
Score = 25.4 bits (53), Expect = 8.5
Identities = 19/86 (22%), Positives = 38/86 (44%)
Frame = -1
Query: 366 DIQEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSELPQPKVLNA 187
D+ +E+ S + +S + + P+K + Q +S+ Y ++ K +N
Sbjct: 106 DLDDEAESVTSEESESDDSSY----GGTPKKRSRQK--KSNTYVQDEIRFSSRNSKGVNY 159
Query: 186 NEEPEIEKKDDPTSKEIERKATEDPE 109
NE+ E ++ +E+ ATE E
Sbjct: 160 NEDAYFESFEEEEEEEMYEYATEVSE 185
>SPBC19G7.08c |||arrestin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 25.4 bits (53), Expect = 8.5
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -1
Query: 288 MEPEKATNQVSLESDNYSISDVNSELPQPKV 196
+ E N + +NYSISD++ + P P +
Sbjct: 93 LHSEHPENNIPPNDNNYSISDLSIKSPPPSL 123
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 25.4 bits (53), Expect = 8.5
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
Frame = -1
Query: 366 DIQEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSIS-DVNSELPQPKVLN 190
D SN SDS + S + + S + + S +SD+ S S D NS
Sbjct: 269 DSDSSSNSSDSEDDSSSDSSDSESESSSEDSDSTSSSSDSDSSSSSEDGNSNTD----TT 324
Query: 189 ANEEPEIEKKDDPTSKEIERKATEDPEGNK 100
+ E + + TS E E + +D + +K
Sbjct: 325 TSGEVSAQSSTNSTSSE-ESTSVKDEDSSK 353
>SPCC320.10 |srp72||signal recognition particle subunit
Srp72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 561
Score = 25.4 bits (53), Expect = 8.5
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -1
Query: 192 NANEEPEIEKKDDPTSKEIERKATEDPE 109
++N + K+ PT K KAT DP+
Sbjct: 509 SSNSSKKTRKRRKPTPKSFNPKATPDPQ 536
>SPAC19D5.03 |cid1||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 405
Score = 25.4 bits (53), Expect = 8.5
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 615 EQKLDEQSMITIKEETQGDSSE 550
++K DEQS + ET GD+SE
Sbjct: 384 QKKTDEQSNKKLLNETDGDNSE 405
>SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 631
Score = 25.4 bits (53), Expect = 8.5
Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Frame = -1
Query: 279 EKA-TNQVSLESDN----YSISDVNSELPQPKVLNANEEPEIEKKDDPTSK 142
EKA TN+V + ++ + SD++SE+P+ ++ N + ++ D+ K
Sbjct: 271 EKALTNKVKNQDEDTLYTFQFSDISSEIPEHQLANLDISADLSDSDNEIVK 321
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,310,593
Number of Sequences: 5004
Number of extensions: 40985
Number of successful extensions: 233
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 232
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 349251756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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