Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_P13
         (600 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071133-1|AAL48755.1|  149|Drosophila melanogaster RE17611p pro...   227   1e-59
AE014296-3077|AAF49215.1|  149|Drosophila melanogaster CG6846-PA...   227   1e-59
BT003208-1|AAO24963.1|  478|Drosophila melanogaster SD23764p pro...    30   2.8  
AE013599-1621|AAF58436.2|  478|Drosophila melanogaster CG3884-PA...    30   2.8  
AY119525-1|AAM50179.1| 2019|Drosophila melanogaster GH15728p pro...    29   6.4  
AE014296-292|AAF47517.1| 2019|Drosophila melanogaster CG13917-PA...    29   6.4  

>AY071133-1|AAL48755.1|  149|Drosophila melanogaster RE17611p
           protein.
          Length = 149

 Score =  227 bits (554), Expect = 1e-59
 Identities = 106/135 (78%), Positives = 121/135 (89%)
 Frame = -1

Query: 462 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 283
           MK N  V+SSRRKNRKRHF APSHIRR LMS+PLSKELRQK+NV+SMPIR+DDEVQV+RG
Sbjct: 1   MKQNPFVSSSRRKNRKRHFQAPSHIRRRLMSAPLSKELRQKYNVRSMPIRRDDEVQVIRG 60

Query: 282 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 103
           H+KG QVGKV+Q YRKKFVVY+E+IQRE ANG   YVGIHPSK +IVKLK++KDRKAIL+
Sbjct: 61  HFKGNQVGKVVQAYRKKFVVYVEKIQRENANGTNVYVGIHPSKVLIVKLKLDKDRKAILE 120

Query: 102 RRAKGRLAALGKXQG 58
           RR KGRLAALGK +G
Sbjct: 121 RRGKGRLAALGKDKG 135


>AE014296-3077|AAF49215.1|  149|Drosophila melanogaster CG6846-PA
           protein.
          Length = 149

 Score =  227 bits (554), Expect = 1e-59
 Identities = 106/135 (78%), Positives = 121/135 (89%)
 Frame = -1

Query: 462 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 283
           MK N  V+SSRRKNRKRHF APSHIRR LMS+PLSKELRQK+NV+SMPIR+DDEVQV+RG
Sbjct: 1   MKQNPFVSSSRRKNRKRHFQAPSHIRRRLMSAPLSKELRQKYNVRSMPIRRDDEVQVIRG 60

Query: 282 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 103
           H+KG QVGKV+Q YRKKFVVY+E+IQRE ANG   YVGIHPSK +IVKLK++KDRKAIL+
Sbjct: 61  HFKGNQVGKVVQAYRKKFVVYVEKIQRENANGTNVYVGIHPSKVLIVKLKLDKDRKAILE 120

Query: 102 RRAKGRLAALGKXQG 58
           RR KGRLAALGK +G
Sbjct: 121 RRGKGRLAALGKDKG 135


>BT003208-1|AAO24963.1|  478|Drosophila melanogaster SD23764p
           protein.
          Length = 478

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -1

Query: 309 DDEVQVVRGHYKGQQ-VGKVMQVYRKKFVVY 220
           D  V + RGHY+G   +GK+  V+R  F+ +
Sbjct: 98  DQPVYIGRGHYEGHLIIGKISSVHRALFIAF 128


>AE013599-1621|AAF58436.2|  478|Drosophila melanogaster CG3884-PA,
           isoform A protein.
          Length = 478

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -1

Query: 309 DDEVQVVRGHYKGQQ-VGKVMQVYRKKFVVY 220
           D  V + RGHY+G   +GK+  V+R  F+ +
Sbjct: 98  DQPVYIGRGHYEGHLIIGKISSVHRALFIAF 128


>AY119525-1|AAM50179.1| 2019|Drosophila melanogaster GH15728p protein.
          Length = 2019

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 23/98 (23%), Positives = 42/98 (42%)
 Frame = -1

Query: 450  KQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKG 271
            ++  SS R  ++R+ S  + +   + SS ++ +     ++      K   +Q + GH KG
Sbjct: 1714 RRAKSSSRGPQERYSSDQNSLAESMKSSVITNKTISHESLSGSS--KLARIQQINGHSKG 1771

Query: 270  QQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPS 157
               GK+    R   V      Q ++ + A A  G  PS
Sbjct: 1772 AATGKIKATQRGSTVGNKSTRQLKQQHNAMASNGSSPS 1809


>AE014296-292|AAF47517.1| 2019|Drosophila melanogaster CG13917-PA
            protein.
          Length = 2019

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 23/98 (23%), Positives = 42/98 (42%)
 Frame = -1

Query: 450  KQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKG 271
            ++  SS R  ++R+ S  + +   + SS ++ +     ++      K   +Q + GH KG
Sbjct: 1714 RRAKSSSRGPQERYSSDQNSLAESMKSSVITNKTISHESLSGSS--KLARIQQINGHSKG 1771

Query: 270  QQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPS 157
               GK+    R   V      Q ++ + A A  G  PS
Sbjct: 1772 AATGKIKATQRGSTVGNKSTRQLKQQHNAMASNGSSPS 1809


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,446,961
Number of Sequences: 53049
Number of extensions: 562215
Number of successful extensions: 1287
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1283
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)