Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_P11
         (328 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    20   7.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    20   7.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    20   7.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    20   7.6  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    20   7.6  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 7.6
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +2

Query: 8   ISHQHIW 28
           ISHQH W
Sbjct: 459 ISHQHAW 465


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 7.6
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +2

Query: 8   ISHQHIW 28
           ISHQH W
Sbjct: 459 ISHQHAW 465


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 7.6
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +2

Query: 8   ISHQHIW 28
           ISHQH W
Sbjct: 459 ISHQHAW 465


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 7.6
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +2

Query: 8   ISHQHIW 28
           ISHQH W
Sbjct: 459 ISHQHAW 465


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 19.8 bits (39), Expect = 7.6
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 106 QPENMQSTQSTP 141
           QPE+ +S+ STP
Sbjct: 420 QPESPESSSSTP 431


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,433
Number of Sequences: 336
Number of extensions: 604
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6261139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)