Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_P10
         (542 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    29   0.099
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   1.6  
AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical prote...    25   2.1  
AJ304406-1|CAC35454.1|  131|Anopheles gambiae putative epidermal...    23   8.6  
AF080546-1|AAC29475.1|  432|Anopheles gambiae S-adenosyl-L-homoc...    23   8.6  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 29.1 bits (62), Expect = 0.099
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = -2

Query: 208  RFFKCLDCKNRTVSLELLPLHSCNNCGSSRWEKAPM 101
            ++FKC+D    T+  E++P  +     +  WE +PM
Sbjct: 1459 KYFKCVDKNKTTLPHEIIPDVNACKAENYSWENSPM 1494


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +1

Query: 247 LYTVEQQKMQCIYI*HILLLCM 312
           L T++Q+K++  Y  H LL CM
Sbjct: 344 LTTIDQEKVKVPYDRHFLLFCM 365


>AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 16/60 (26%), Positives = 28/60 (46%)
 Frame = +3

Query: 96  LNIGAFSHRELPQLLQECRGSNSKETVLFLQSKHLKNLLNVSNTFRGCLSSLHR*AAENA 275
           L+IG+ + R L Q   +  G+N  +   + ++ +  N     NT+   LS L +    NA
Sbjct: 114 LSIGSSNSRFLRQFGPQFTGTNRPQNWFYSRNNNNNNNNEHHNTYNARLSKLMQEKTRNA 173


>AJ304406-1|CAC35454.1|  131|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 131

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +3

Query: 111 FSHRELPQLLQECRGSNSKETVLFLQSKHLKNL 209
           F+H+     ++ C G+N + +V   +  H KNL
Sbjct: 29  FAHKNEINEMRVCIGTNGRMSVPANREYHYKNL 61


>AF080546-1|AAC29475.1|  432|Anopheles gambiae
           S-adenosyl-L-homocysteine hydrolase protein.
          Length = 432

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 117 HRELPQLLQECRGSNSKET 173
           H E P+LL+E RG + + T
Sbjct: 140 HAEHPELLKEIRGLSEETT 158


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 483,806
Number of Sequences: 2352
Number of extensions: 8856
Number of successful extensions: 236
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 236
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)