Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_P09
(716 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6F12.13c |fps1||geranyltranstransferase Fps1|Schizosaccharom... 113 2e-26
SPBC36.06c |spo9||farnesyl pyrophosphate synthetase|Schizosaccha... 107 1e-24
SPBPJ4664.01 |dps1|SPBPJ694.01|decaprenyl diphosphate synthase s... 26 4.7
SPBC15D4.09c |||cystathionine gamma-synthase |Schizosaccharomyce... 26 6.2
SPAC18G6.07c |mra1||ribosome biogenesis protein Mra1|Schizosacch... 26 6.2
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 26 6.2
SPBC17G9.13c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 25 8.2
SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces pomb... 25 8.2
SPCC1795.08c |||histone acetyltransferase complex subunit |Schiz... 25 8.2
>SPAC6F12.13c |fps1||geranyltranstransferase
Fps1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 347
Score = 113 bits (273), Expect = 2e-26
Identities = 56/168 (33%), Positives = 95/168 (56%), Gaps = 1/168 (0%)
Frame = -2
Query: 523 WRTSMGQHLDHVTGNRKT-DYSSFTLDRXXXXXXXXXXXXXYNLPVSLGLLLAENVDEKI 347
++T +GQ LD +T + D S F+L + + LPV+L + LA +
Sbjct: 157 FQTELGQQLDLLTAPEDSVDLSKFSLQKHSFIVIYKTAFYSFYLPVALAMHLAGVATPEN 216
Query: 346 YKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQRT 167
K AQDI + +G FQ+QDD++DC+GD TGK+GTDI + KC+W+ AL +CT QR
Sbjct: 217 LKCAQDILIILGKYFQVQDDYLDCYGDPTVTGKIGTDILDNKCSWIINLALAKCTPEQRV 276
Query: 166 VFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENI 23
+ YG + +R+K ++E+L++ +++ E++ I + I+ +
Sbjct: 277 ILDDNYGRKDSESEKRVKAVFEELNIRGEFENYEESEVSEIKKLIDGV 324
Score = 40.7 bits (91), Expect = 2e-04
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = -2
Query: 691 IGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEM 530
+ +W K L +N +GGK+ RG++ + SY+ I + E A LGW VE+
Sbjct: 34 VTEWYKNSLFHNTLGGKYNRGLSVIDSYE-ILLGHPLDEAAYMKAAVLGWMVEL 86
>SPBC36.06c |spo9||farnesyl pyrophosphate
synthetase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 351
Score = 107 bits (258), Expect = 1e-24
Identities = 56/166 (33%), Positives = 90/166 (54%), Gaps = 1/166 (0%)
Frame = -2
Query: 517 TSMGQHLDHVTG-NRKTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLGLLLAENVDEKIYK 341
T +GQ D ++ + + SF L + + LP+ LLL+ N ++K Y
Sbjct: 163 TELGQQEDLLSSRDGEASLRSFDLMKYDFIITYKTSFYSFYLPIKCALLLSRNSNQKAYD 222
Query: 340 SAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQRTVF 161
+ + +G FQ+QDD++DCFGD GKVG DIQ+ KCTWL A + + Q +
Sbjct: 223 TTIKLSKLLGYYFQVQDDYLDCFGDYTVLGKVGMDIQDNKCTWLVCYAEKFASADQLNLL 282
Query: 160 KACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENI 23
+A YG + ++ IK+LY +L +P++Y E M D+I ++I+ I
Sbjct: 283 RAHYGKAGSENIAVIKQLYHELQIPELYHKFEDDMVDSISKEIDLI 328
Score = 29.1 bits (62), Expect = 0.66
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = -2
Query: 697 PQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEM 530
P+ + L + N +GGK+ RG+ + S ++ E + E + A LGW +E+
Sbjct: 37 PEETEKLLYSIKRNTLGGKNNRGLAVLQSLTSLINRE-LEEAEFRDAALLGWLIEI 91
>SPBPJ4664.01 |dps1|SPBPJ694.01|decaprenyl diphosphate synthase
subunit Dps1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 378
Score = 26.2 bits (55), Expect = 4.7
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = -2
Query: 316 IGTMFQIQDDFIDCFGDEIKTGK-VGTDIQERKCTWLAVQALQRCTEAQRTVFKACYGSS 140
IGT FQ+ DD +D + GK G D++ T + A ++ E + +
Sbjct: 262 IGTAFQLMDDVLDYTSKDDTLGKAAGADLKLGLATAPVLFAWKKYPELGAMIVNR---FN 318
Query: 139 EPAHVERIKRLYE 101
P+ ++R + L E
Sbjct: 319 HPSDIQRARSLVE 331
>SPBC15D4.09c |||cystathionine gamma-synthase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 610
Score = 25.8 bits (54), Expect = 6.2
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = -2
Query: 127 VERIKRLYEDLHLPQIYKHQEKAMYDNIIRQ 35
++R ++ E++H+PQ+Y + Y I +Q
Sbjct: 130 IDRNRKYTEEIHIPQVYSVLFPSKYFGIAKQ 160
>SPAC18G6.07c |mra1||ribosome biogenesis protein
Mra1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 359
Score = 25.8 bits (54), Expect = 6.2
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 334 QDICLEIGTMFQIQDDFIDCFGDE 263
Q +C+ IG M DDF D + DE
Sbjct: 307 QSVCIAIGAMAHGPDDFSDGWVDE 330
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 25.8 bits (54), Expect = 6.2
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -2
Query: 703 EVPQIGDWLKKMLHYNLVGGKHTRGI 626
E+ +I D+L+ H+ +GGK RG+
Sbjct: 278 ELEEIVDFLRDPTHFTRLGGKLPRGV 303
>SPBC17G9.13c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 317
Score = 25.4 bits (53), Expect = 8.2
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -3
Query: 366 KMWMKKFINLLKTFAWK*ERCS 301
K +K+F NLLKTFA + ER +
Sbjct: 93 KRRIKRFRNLLKTFACRIERAN 114
>SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 25.4 bits (53), Expect = 8.2
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -1
Query: 572 YFENGL*TGMVCRNDFMA-HFNGSTFRSCNRKSKNRLFFIYSG 447
YF + L TGMV NDF A + F C + R F Y G
Sbjct: 416 YFTDNLETGMVAVNDFGAFYLLQMPFGGCKKSGYGR-FAGYEG 457
>SPCC1795.08c |||histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 985
Score = 25.4 bits (53), Expect = 8.2
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +3
Query: 588 SGFSIVLYEITVVIPLVCLPPTK 656
+G L+E++V +PL +PP+K
Sbjct: 375 TGVEAPLFELSVSMPLTLIPPSK 397
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,134,237
Number of Sequences: 5004
Number of extensions: 66355
Number of successful extensions: 212
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 212
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 335201398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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