Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_P07
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68315-8|CAA92674.1| 142|Caenorhabditis elegans Hypothetical pr... 159 1e-39
Z68315-10|CAD59149.1| 109|Caenorhabditis elegans Hypothetical p... 131 3e-31
Z68315-9|CAA92678.1| 106|Caenorhabditis elegans Hypothetical pr... 131 3e-31
Z81075-7|CAI79229.1| 342|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z81075-3|CAI79228.1| 192|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z81075-2|CAB03048.1| 368|Caenorhabditis elegans Hypothetical pr... 28 4.7
AL032645-3|CAI79264.1| 342|Caenorhabditis elegans Hypothetical ... 28 4.7
Z50741-2|CAA90610.1| 383|Caenorhabditis elegans Hypothetical pr... 27 8.1
U23513-3|AAB36862.1| 209|Caenorhabditis elegans Hypothetical pr... 27 8.1
>Z68315-8|CAA92674.1| 142|Caenorhabditis elegans Hypothetical
protein F28C6.7a protein.
Length = 142
Score = 159 bits (385), Expect = 1e-39
Identities = 73/135 (54%), Positives = 103/135 (76%)
Frame = -1
Query: 461 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 282
MK N V+S K+RK HF+APSH RR +MS+PL+KELR K ++++PIR DDEV V+RG
Sbjct: 1 MKVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTKHGIRAIPIRTDDEVVVMRG 60
Query: 281 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVNLKMNKDRKAILD 102
+KG G+V++ YRKKFV++I++I REKANG+T ++GIHPSK I LK++KDR+A+++
Sbjct: 61 RHKGN-TGRVLRCYRKKFVIHIDKITREKANGSTVHIGIHPSKVAITKLKLDKDRRALVE 119
Query: 101 RRAKGRLAALGKXQG 57
R+A GR G +G
Sbjct: 120 RKAAGRSRVTGILKG 134
>Z68315-10|CAD59149.1| 109|Caenorhabditis elegans Hypothetical
protein F28C6.7c protein.
Length = 109
Score = 131 bits (317), Expect = 3e-31
Identities = 60/103 (58%), Positives = 82/103 (79%)
Frame = -1
Query: 461 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 282
MK N V+S K+RK HF+APSH RR +MS+PL+KELR K ++++PIR DDEV V+RG
Sbjct: 1 MKVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTKHGIRAIPIRTDDEVVVMRG 60
Query: 281 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSK 153
+KG G+V++ YRKKFV++I++I REKANG+T ++GIHPSK
Sbjct: 61 RHKG-NTGRVLRCYRKKFVIHIDKITREKANGSTVHIGIHPSK 102
>Z68315-9|CAA92678.1| 106|Caenorhabditis elegans Hypothetical
protein F28C6.7b protein.
Length = 106
Score = 131 bits (317), Expect = 3e-31
Identities = 60/103 (58%), Positives = 82/103 (79%)
Frame = -1
Query: 461 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 282
MK N V+S K+RK HF+APSH RR +MS+PL+KELR K ++++PIR DDEV V+RG
Sbjct: 1 MKVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTKHGIRAIPIRTDDEVVVMRG 60
Query: 281 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSK 153
+KG G+V++ YRKKFV++I++I REKANG+T ++GIHPSK
Sbjct: 61 RHKG-NTGRVLRCYRKKFVIHIDKITREKANGSTVHIGIHPSK 102
>Z81075-7|CAI79229.1| 342|Caenorhabditis elegans Hypothetical
protein F35C12.3c protein.
Length = 342
Score = 27.9 bits (59), Expect = 4.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 191 WPFLFESSQCIQQTFYDTPASLC 259
W +F ++CI TF + P SLC
Sbjct: 217 WRCMFAQNKCIGTTFQNIPISLC 239
>Z81075-3|CAI79228.1| 192|Caenorhabditis elegans Hypothetical
protein F35C12.3b protein.
Length = 192
Score = 27.9 bits (59), Expect = 4.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 191 WPFLFESSQCIQQTFYDTPASLC 259
W +F ++CI TF + P SLC
Sbjct: 67 WRCMFAQNKCIGTTFQNIPISLC 89
>Z81075-2|CAB03048.1| 368|Caenorhabditis elegans Hypothetical
protein F35C12.3a protein.
Length = 368
Score = 27.9 bits (59), Expect = 4.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 191 WPFLFESSQCIQQTFYDTPASLC 259
W +F ++CI TF + P SLC
Sbjct: 243 WRCMFAQNKCIGTTFQNIPISLC 265
>AL032645-3|CAI79264.1| 342|Caenorhabditis elegans Hypothetical
protein F35C12.3c protein.
Length = 342
Score = 27.9 bits (59), Expect = 4.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 191 WPFLFESSQCIQQTFYDTPASLC 259
W +F ++CI TF + P SLC
Sbjct: 217 WRCMFAQNKCIGTTFQNIPISLC 239
>Z50741-2|CAA90610.1| 383|Caenorhabditis elegans Hypothetical
protein F55G7.2 protein.
Length = 383
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = -1
Query: 458 KFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGH 279
KFN+ V RR N K+ P H + + +++++ + S+P K + H
Sbjct: 94 KFNEAVALFRRDNPKKQLLLPKHWDQSTCTQQVAQKITEIAKDLSVPYPKK-----LNQH 148
Query: 278 YKG 270
YKG
Sbjct: 149 YKG 151
>U23513-3|AAB36862.1| 209|Caenorhabditis elegans Hypothetical
protein D2021.8 protein.
Length = 209
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/37 (40%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Frame = +3
Query: 261 NLL--AFVVSTYNLNFIVFANRHGFYIEFLS*FLRQG 365
NLL A VV ++NL+ ++ A +HG ++E + L+QG
Sbjct: 11 NLLKPAVVVDSFNLHAVISATQHG-HVESVEAALKQG 46
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,079,123
Number of Sequences: 27780
Number of extensions: 261344
Number of successful extensions: 751
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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