Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_P04
         (385 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    21   3.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   3.2  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    20   9.7  

>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 12/42 (28%), Positives = 15/42 (35%)
 Frame = -3

Query: 326 TNSKMVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGR 201
           T  K++    Q+R               QYKK  E H A  R
Sbjct: 84  TAEKVIRHLTQKRARDWERLSKKYDPQGQYKKRYEEHVATSR 125


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 175 VTVVSPNPSSKRRQKPLRKLCS 110
           V +VS   ++ R+  PL+KLC+
Sbjct: 136 VEMVSCKDAALRKVVPLKKLCN 157


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 327 SARYQQTSKKSKYRPA 374
           S+R  Q + KSK RPA
Sbjct: 246 SSRSHQPATKSKPRPA 261


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,980
Number of Sequences: 336
Number of extensions: 1748
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8014124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)