Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_O23
         (769 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132904-15|CAC35848.2|  518|Caenorhabditis elegans Hypothetical...    30   1.6  
U41036-9|ABA61867.1|  245|Caenorhabditis elegans Dopamine recept...    28   8.4  
U41036-8|ABA61866.1|  590|Caenorhabditis elegans Dopamine recept...    28   8.4  
U41036-7|ABA61865.1|  607|Caenorhabditis elegans Dopamine recept...    28   8.4  
U41036-6|ABA61864.1|  605|Caenorhabditis elegans Dopamine recept...    28   8.4  
AY485309-1|AAR37416.1|  607|Caenorhabditis elegans DOP-3 protein.      28   8.4  

>AL132904-15|CAC35848.2|  518|Caenorhabditis elegans Hypothetical
           protein Y111B2A.19 protein.
          Length = 518

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = -3

Query: 581 LYSFAFMLLYFI*AHXFIYMTNVFNLKKSLSVTGI*MWFPXIIVVEFVLIGIFYRTLL 408
           L    F++ Y   A  F Y+ + +N +K L +TGI +W   +    F   G +Y  LL
Sbjct: 63  LLQTVFIVFYMFFAPLFGYLGDRYN-RKMLMITGICIWILAVFASSFCGEGHYYLFLL 119


>U41036-9|ABA61867.1|  245|Caenorhabditis elegans Dopamine receptor
           protein 3, isoformd protein.
          Length = 245

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 324 LRNPFFKMLSPVFFLFIP 271
           L NP+F M+S +F  FIP
Sbjct: 160 LANPYFNMISSIFSFFIP 177


>U41036-8|ABA61866.1|  590|Caenorhabditis elegans Dopamine receptor
           protein 3, isoformc protein.
          Length = 590

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 324 LRNPFFKMLSPVFFLFIP 271
           L NP+F M+S +F  FIP
Sbjct: 158 LANPYFNMISSIFSFFIP 175


>U41036-7|ABA61865.1|  607|Caenorhabditis elegans Dopamine receptor
           protein 3, isoformb protein.
          Length = 607

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 324 LRNPFFKMLSPVFFLFIP 271
           L NP+F M+S +F  FIP
Sbjct: 175 LANPYFNMISSIFSFFIP 192


>U41036-6|ABA61864.1|  605|Caenorhabditis elegans Dopamine receptor
           protein 3, isoforma protein.
          Length = 605

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 324 LRNPFFKMLSPVFFLFIP 271
           L NP+F M+S +F  FIP
Sbjct: 173 LANPYFNMISSIFSFFIP 190


>AY485309-1|AAR37416.1|  607|Caenorhabditis elegans DOP-3 protein.
          Length = 607

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 324 LRNPFFKMLSPVFFLFIP 271
           L NP+F M+S +F  FIP
Sbjct: 175 LANPYFNMISSIFSFFIP 192


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,054,989
Number of Sequences: 27780
Number of extensions: 286996
Number of successful extensions: 493
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 493
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)