Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_O22
         (404 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0100 + 13465369-13465371,13465464-13465647,13466506-13466528     60   5e-10
05_06_0013 + 24852262-24852264,24852717-24852900,24853449-24853471     60   9e-10
07_03_0802 - 21614891-21615195,21615637-21615823,21615939-216161...    58   2e-09
01_01_0066 - 513578-513730,513809-513920,514000-514163,514369-51...    27   4.3  
05_01_0002 - 8097-8246,8384-8495,8572-8735,9367-9519,9603-9732,9...    27   7.5  
10_08_0179 + 15483854-15483968,15484196-15484302,15485211-154853...    26   9.9  

>11_04_0100 + 13465369-13465371,13465464-13465647,13466506-13466528
          Length = 69

 Score = 60.5 bits (140), Expect = 5e-10
 Identities = 26/40 (65%), Positives = 34/40 (85%)
 Frame = -3

Query: 207 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCXK 88
           MP++I +IKDFL+ ARRKDA+SV+IK+  + VKFKVRC K
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVRIKRTKDAVKFKVRCSK 40



 Score = 46.0 bits (104), Expect = 1e-05
 Identities = 25/60 (41%), Positives = 33/60 (55%)
 Frame = -1

Query: 182 KTF*LRRGGKTPNRSK*RRTLRMSSSRFDAXRFLYTLVITDKEKAEKLKQSLPPGLQVKE 3
           K F L    K     + +RT      +    ++LYTL + D +KA KLKQSLPPGL V+E
Sbjct: 9   KDFLLTARRKDARSVRIKRTKDAVKFKVRCSKYLYTLCVFDADKANKLKQSLPPGLTVQE 68


>05_06_0013 + 24852262-24852264,24852717-24852900,24853449-24853471
          Length = 69

 Score = 59.7 bits (138), Expect = 9e-10
 Identities = 25/40 (62%), Positives = 35/40 (87%)
 Frame = -3

Query: 207 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCXK 88
           MP++I +IKDFL+ ARRKDA+SV+IK++ + VKFKVRC +
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVRIKRSKDAVKFKVRCSR 40



 Score = 46.0 bits (104), Expect = 1e-05
 Identities = 20/29 (68%), Positives = 24/29 (82%)
 Frame = -1

Query: 89  RFLYTLVITDKEKAEKLKQSLPPGLQVKE 3
           R+LYTL + D +KA KLKQSLPPGL V+E
Sbjct: 40  RYLYTLCVHDTDKANKLKQSLPPGLTVQE 68


>07_03_0802 -
           21614891-21615195,21615637-21615823,21615939-21616154,
           21616669-21616872,21617336-21617569,21617670-21617763,
           21618844-21618890,21619293-21619309,21620183-21620459
          Length = 526

 Score = 58.4 bits (135), Expect = 2e-09
 Identities = 25/39 (64%), Positives = 33/39 (84%)
 Frame = -3

Query: 204 PREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCXK 88
           P++I +IKDFL+ ARRKDA+SV+IK+  + VKFKVRC K
Sbjct: 32  PKQIHEIKDFLLTARRKDARSVRIKRTKDAVKFKVRCSK 70



 Score = 46.0 bits (104), Expect = 1e-05
 Identities = 25/60 (41%), Positives = 33/60 (55%)
 Frame = -1

Query: 182 KTF*LRRGGKTPNRSK*RRTLRMSSSRFDAXRFLYTLVITDKEKAEKLKQSLPPGLQVKE 3
           K F L    K     + +RT      +    ++LYTL + D +KA KLKQSLPPGL V+E
Sbjct: 39  KDFLLTARRKDARSVRIKRTKDAVKFKVRCSKYLYTLCVFDADKANKLKQSLPPGLTVQE 98


>01_01_0066 -
           513578-513730,513809-513920,514000-514163,514369-514521,
           514598-514736,514823-514923,514995-515666,515953-516038,
           516112-516777,516874-517128,517231-517358,518645-518799,
           518880-519133,519186-519260,519324-519399,519511-519644,
           519871-520153,520692-520850,520940-521038,521142-521310,
           521423-521653,522002-522114,524179-524310,524389-524469,
           525641-525763
          Length = 1570

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +1

Query: 244 EIYTFNEKNYHKSLSPRHF*FKGENI--FYNRMKITRLNRIN 363
           EIY    KNYHKSL  R F FK ++      +  +T +  IN
Sbjct: 794 EIYA---KNYHKSLDHRSFYFKQQDTKNLSTKSLLTEIKEIN 832


>05_01_0002 -
           8097-8246,8384-8495,8572-8735,9367-9519,9603-9732,
           9802-9902,10016-10651,10820-10899,11014-11673,
           11787-12041,12154-12281,12515-12669,12735-12919,
           13020-13049,13164-13239,13371-13504,13703-13994,
           14400-14567,14647-14745,14843-15014,15103-15281
          Length = 1352

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = +1

Query: 244 EIYTFNEKNYHKSLSPRHF*FKGEN 318
           EIY    KNYHKSL  R F FK ++
Sbjct: 596 EIYA---KNYHKSLDHRSFYFKQQD 617


>10_08_0179 +
           15483854-15483968,15484196-15484302,15485211-15485304,
           15485537-15485637,15486143-15486199,15486614-15486761,
           15486982-15487049
          Length = 229

 Score = 26.2 bits (55), Expect = 9.9
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +3

Query: 6   FNLETWR*TLLKFLSLLFVSDDQGVQEPXS 95
           F L+ WR  LLK   + F S  +GVQ P S
Sbjct: 137 FPLDKWR-NLLKACGIDFTSTAKGVQSPGS 165


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,098,962
Number of Sequences: 37544
Number of extensions: 150186
Number of successful extensions: 291
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 291
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 706675332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)