Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_O22
         (404 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81463-5|CAB03853.1|   70|Caenorhabditis elegans Hypothetical pr...    72   1e-13
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr...    28   2.9  
Z81479-8|CAB03946.1| 1181|Caenorhabditis elegans Hypothetical pr...    27   5.1  
U42835-6|AAA83589.2|  816|Caenorhabditis elegans Dehydrogenases,...    26   9.0  
AF016661-2|AAB66051.1|  246|Caenorhabditis elegans Hypothetical ...    26   9.0  

>Z81463-5|CAB03853.1|   70|Caenorhabditis elegans Hypothetical
           protein C06B8.8 protein.
          Length = 70

 Score = 72.1 bits (169), Expect = 1e-13
 Identities = 32/38 (84%), Positives = 35/38 (92%)
 Frame = -3

Query: 207 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRC 94
           MP+EIK+IKDFL+KARRKDAKSVKIKKN  N KFKVRC
Sbjct: 1   MPKEIKEIKDFLVKARRKDAKSVKIKKNSNNTKFKVRC 38



 Score = 54.8 bits (126), Expect = 2e-08
 Identities = 27/60 (45%), Positives = 37/60 (61%)
 Frame = -1

Query: 182 KTF*LRRGGKTPNRSK*RRTLRMSSSRFDAXRFLYTLVITDKEKAEKLKQSLPPGLQVKE 3
           K F ++   K     K ++    +  +     +LYTLV+ DK+KAEKLKQSLPPG+QVKE
Sbjct: 9   KDFLVKARRKDAKSVKIKKNSNNTKFKVRCASYLYTLVVADKDKAEKLKQSLPPGIQVKE 68


>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
            B0207.5 protein.
          Length = 3279

 Score = 27.9 bits (59), Expect = 2.9
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = -3

Query: 168  KARRKDAKSVKIKK--NPENVKFKVRCXKVPVHPGH 67
            K  R+D  +VKI++    E V FK RC   P  PG+
Sbjct: 1112 KPNREDCYTVKIEELTAEEYVAFKKRCLSAPETPGN 1147


>Z81479-8|CAB03946.1| 1181|Caenorhabditis elegans Hypothetical
           protein C34F6.9 protein.
          Length = 1181

 Score = 27.1 bits (57), Expect = 5.1
 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
 Frame = -1

Query: 245 SLTVLVENYSSSTCRVKSKIS-KTF*LRRGGKTPNRSK*RRTLRMSSSRFDAXRFLYTLV 69
           S+TV  + Y   T   +   S K   L     TP  SK RR+ R+ +S      F+Y   
Sbjct: 713 SITVSEDGYPPETVSPQELHSLKRKSLPDDNTTP--SKQRRSSRLKNSTAKTADFVYEPA 770

Query: 68  ITDKEKAEKLKQSLP 24
           +TD+ + +K   SLP
Sbjct: 771 VTDRSEQDK-SPSLP 784


>U42835-6|AAA83589.2|  816|Caenorhabditis elegans Dehydrogenases,
           short chain protein27 protein.
          Length = 816

 Score = 26.2 bits (55), Expect = 9.0
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +1

Query: 241 REIYTFNEKNYHKSLSPRHF*FKGENIFYNRMKITR 348
           RE++T   ++ HKSL    F   G+  FYN M I R
Sbjct: 306 RELFTKVLRDSHKSLGIDDFLCHGDLWFYNLMWIPR 341


>AF016661-2|AAB66051.1|  246|Caenorhabditis elegans Hypothetical
           protein F02E11.3 protein.
          Length = 246

 Score = 26.2 bits (55), Expect = 9.0
 Identities = 13/47 (27%), Positives = 25/47 (53%)
 Frame = +1

Query: 202 RHVEDE*FSTSTVREIYTFNEKNYHKSLSPRHF*FKGENIFYNRMKI 342
           RH + E  S  +  ++Y  +   Y +SL+     ++ E++F+ R KI
Sbjct: 36  RHADYEELSELSEHDVYLDDSDIYAESLTEDVIIYQPEDVFFRRPKI 82


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,458,806
Number of Sequences: 27780
Number of extensions: 158116
Number of successful extensions: 366
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 366
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 641068680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)