Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_O22
         (404 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   3.0  
S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor prot...    21   5.3  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    21   7.0  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = +1

Query: 1   TSLTWRPGGKLCLSFSAFSLSVMTRVYRNLXASNLE--LDILRVLLYFDR 144
           T  TW  G  LC S+ +  + + T    +L A +++  L + + L+Y  R
Sbjct: 100 TGGTWELGPMLCDSWVSLDILLCTASILSLCAISIDRYLAVTQPLIYSRR 149


>S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor
           protein.
          Length = 90

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +2

Query: 77  CTGTLXHRTLNLTFSGFFFILT 142
           CT T     + L FSG F + +
Sbjct: 49  CTDTFMEGVIVLAFSGLFSVFS 70


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 7/34 (20%), Positives = 18/34 (52%)
 Frame = +1

Query: 250 YTFNEKNYHKSLSPRHF*FKGENIFYNRMKITRL 351
           Y +N  NY+ +    ++    + ++YN + I ++
Sbjct: 331 YNYNNNNYNNNNYNNNYNNNCKKLYYNIINIEQI 364


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,453
Number of Sequences: 438
Number of extensions: 1784
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10132494
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)