Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_O16
(627 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024832-7|AAL27257.1| 389|Caenorhabditis elegans Hypothetical ... 134 4e-32
AC024832-6|AAL27256.1| 459|Caenorhabditis elegans Hypothetical ... 133 9e-32
Z93386-1|CAB07645.1| 442|Caenorhabditis elegans Hypothetical pr... 128 4e-30
Z29117-5|CAC42271.1| 1704|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z29117-4|CAA82384.2| 1691|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z29117-3|CAA82383.2| 1689|Caenorhabditis elegans Hypothetical pr... 29 2.1
AF049142-1|AAC24116.1| 1704|Caenorhabditis elegans ATP-binding c... 29 2.1
U70850-4|AAB09125.3| 483|Caenorhabditis elegans Amino acid tran... 29 3.6
Z72516-3|CAA96688.2| 1322|Caenorhabditis elegans Hypothetical pr... 28 4.8
AY874871-1|AAX62732.1| 1322|Caenorhabditis elegans chitin syntha... 28 4.8
Z93392-1|CAB07687.2| 1737|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z83219-9|CAB05699.2| 1737|Caenorhabditis elegans Hypothetical pr... 28 6.3
AL032648-9|CAB54460.1| 1737|Caenorhabditis elegans Hypothetical ... 28 6.3
U64605-7|AAF98603.1| 296|Caenorhabditis elegans Lamp (lysosome-... 27 8.3
>AC024832-7|AAL27257.1| 389|Caenorhabditis elegans Hypothetical
protein Y57E12AL.1b protein.
Length = 389
Score = 134 bits (325), Expect = 4e-32
Identities = 70/138 (50%), Positives = 92/138 (66%), Gaps = 4/138 (2%)
Frame = -1
Query: 627 LCIWVXSVLYSSIRTASASS--KITMSEHILAKEGSTGYDCIXXXXXXXXXXXGNEPKVF 454
L +W +LY+SIR +S +S KIT G+T + I N +V+
Sbjct: 262 LFLWFACLLYASIRNSSNTSLGKITGG-------GNTSDEAIQLTDDAESQ---NSKRVY 311
Query: 453 DNEGDSVAYSWSFFHIMFALATLYVMMTLTNWFNPNSQLA--NENIASMWVKITSSWMCI 280
DNE + VAYS+SFFH MFALA+LYVMMTLT+W+ P++ L+ N N+AS+WVKI SSW+C+
Sbjct: 312 DNEEEGVAYSYSFFHFMFALASLYVMMTLTSWYKPSNDLSHLNSNMASVWVKIVSSWVCV 371
Query: 279 GLYIWTLVAPAIFPDREF 226
LY WTLVAP I+PDREF
Sbjct: 372 ALYCWTLVAPIIYPDREF 389
>AC024832-6|AAL27256.1| 459|Caenorhabditis elegans Hypothetical
protein Y57E12AL.1a protein.
Length = 459
Score = 133 bits (322), Expect = 9e-32
Identities = 70/141 (49%), Positives = 92/141 (65%), Gaps = 7/141 (4%)
Frame = -1
Query: 627 LCIWVXSVLYSSIRTASASS--KITMSEHILAKEGSTGYDCIXXXXXXXXXXXG---NEP 463
L +W +LY+SIR +S +S KIT G+T + I N
Sbjct: 326 LFLWFACLLYASIRNSSNTSLGKITGG-------GNTSDEAIQLSSSLNGADDAESQNSK 378
Query: 462 KVFDNEGDSVAYSWSFFHIMFALATLYVMMTLTNWFNPNSQLA--NENIASMWVKITSSW 289
+V+DNE + VAYS+SFFH MFALA+LYVMMTLT+W+ P++ L+ N N+AS+WVKI SSW
Sbjct: 379 RVYDNEEEGVAYSYSFFHFMFALASLYVMMTLTSWYKPSNDLSHLNSNMASVWVKIVSSW 438
Query: 288 MCIGLYIWTLVAPAIFPDREF 226
+C+ LY WTLVAP I+PDREF
Sbjct: 439 VCVALYCWTLVAPIIYPDREF 459
>Z93386-1|CAB07645.1| 442|Caenorhabditis elegans Hypothetical
protein R11H6.2 protein.
Length = 442
Score = 128 bits (308), Expect = 4e-30
Identities = 71/140 (50%), Positives = 91/140 (65%), Gaps = 6/140 (4%)
Frame = -1
Query: 627 LCIWVXSVLYSSIRTASASS--KIT--MSEHILAKEGSTGYDCIXXXXXXXXXXXGNEPK 460
L IW+ ++Y+SIR +S +S KIT EH+ + G K
Sbjct: 322 LLIWLICLVYASIRNSSNTSLGKITGDNEEHVQLNDVEGG-------------------K 362
Query: 459 VFDNEGDSVAYSWSFFHIMFALATLYVMMTLTNWFNPNSQLA--NENIASMWVKITSSWM 286
+DNE + VAYS+SFFH MF LA+LYVMMTLT+W++P+S LA N N+AS+WVK+ SSW+
Sbjct: 363 AWDNEEEGVAYSYSFFHFMFCLASLYVMMTLTSWYHPDSDLAHLNSNMASVWVKMFSSWI 422
Query: 285 CIGLYIWTLVAPAIFPDREF 226
C GLY WTLVAP IFPDREF
Sbjct: 423 CGGLYAWTLVAPIIFPDREF 442
>Z29117-5|CAC42271.1| 1704|Caenorhabditis elegans Hypothetical
protein C48B4.4c protein.
Length = 1704
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1
Query: 403 HYMEEAPRVGDGVSFVVEHLRLV 471
HYM+EA R+GD V F++ H +LV
Sbjct: 735 HYMDEAERLGDWV-FIMSHGKLV 756
>Z29117-4|CAA82384.2| 1691|Caenorhabditis elegans Hypothetical
protein C48B4.4b protein.
Length = 1691
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1
Query: 403 HYMEEAPRVGDGVSFVVEHLRLV 471
HYM+EA R+GD V F++ H +LV
Sbjct: 722 HYMDEAERLGDWV-FIMSHGKLV 743
>Z29117-3|CAA82383.2| 1689|Caenorhabditis elegans Hypothetical
protein C48B4.4a protein.
Length = 1689
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1
Query: 403 HYMEEAPRVGDGVSFVVEHLRLV 471
HYM+EA R+GD V F++ H +LV
Sbjct: 722 HYMDEAERLGDWV-FIMSHGKLV 743
>AF049142-1|AAC24116.1| 1704|Caenorhabditis elegans ATP-binding
cassette transporter protein.
Length = 1704
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1
Query: 403 HYMEEAPRVGDGVSFVVEHLRLV 471
HYM+EA R+GD V F++ H +LV
Sbjct: 735 HYMDEAERLGDWV-FIMSHGKLV 756
>U70850-4|AAB09125.3| 483|Caenorhabditis elegans Amino acid
transporter protein 8 protein.
Length = 483
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -1
Query: 387 LYVMMTLTNWFNPNSQLANENIASMWVKITSSWMCIGLYIWTLV 256
L + +TLTN F+ N A I SM KI ++ + IG+ + ++
Sbjct: 141 LLLFLTLTNMFSLNKFAARVQIISMCSKIFATLIIIGIGFFFII 184
>Z72516-3|CAA96688.2| 1322|Caenorhabditis elegans Hypothetical
protein T25G3.2 protein.
Length = 1322
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 76 RLIELCXAFTKLYKXLNDK-LRTYKVKWDNNFILYWMTTHQILHC 207
RL+ + T L+ L DK + +K +W +Y++ H+I+ C
Sbjct: 594 RLVVKLPSGTLLFVHLKDKKMIRHKKRWSQVMYMYYLLGHRIMDC 638
>AY874871-1|AAX62732.1| 1322|Caenorhabditis elegans chitin synthase
1 protein.
Length = 1322
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 76 RLIELCXAFTKLYKXLNDK-LRTYKVKWDNNFILYWMTTHQILHC 207
RL+ + T L+ L DK + +K +W +Y++ H+I+ C
Sbjct: 594 RLVVKLPSGTLLFVHLKDKKMIRHKKRWSQVMYMYYLLGHRIMDC 638
>Z93392-1|CAB07687.2| 1737|Caenorhabditis elegans Hypothetical protein
Y48E1A.1a protein.
Length = 1737
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -3
Query: 613 VQRSVLKHKDRLRLVQDNNVRTHSG 539
+QR ++KH + +R+ D+ VR H G
Sbjct: 1024 LQRCIIKHLEGIRVHYDSTVRDHDG 1048
>Z83219-9|CAB05699.2| 1737|Caenorhabditis elegans Hypothetical protein
Y48E1A.1a protein.
Length = 1737
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -3
Query: 613 VQRSVLKHKDRLRLVQDNNVRTHSG 539
+QR ++KH + +R+ D+ VR H G
Sbjct: 1024 LQRCIIKHLEGIRVHYDSTVRDHDG 1048
>AL032648-9|CAB54460.1| 1737|Caenorhabditis elegans Hypothetical
protein Y48E1A.1a protein.
Length = 1737
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -3
Query: 613 VQRSVLKHKDRLRLVQDNNVRTHSG 539
+QR ++KH + +R+ D+ VR H G
Sbjct: 1024 LQRCIIKHLEGIRVHYDSTVRDHDG 1048
>U64605-7|AAF98603.1| 296|Caenorhabditis elegans Lamp
(lysosome-associated membraneprotein) homolog protein 2
protein.
Length = 296
Score = 27.5 bits (58), Expect = 8.3
Identities = 21/77 (27%), Positives = 30/77 (38%)
Frame = -1
Query: 471 NEPKVFDNEGDSVAYSWSFFHIMFALATLYVMMTLTNWFNPNSQLANENIASMWVKITSS 292
+E K N+ D+ Y +I F L T+ M T+ F P + V I
Sbjct: 184 SEQKYAINDNDNDKYG-PMAYIKFKLTTIQAFMEDTDSFGPKETCPTDQSTLDLVPIIVG 242
Query: 291 WMCIGLYIWTLVAPAIF 241
GL + TLV I+
Sbjct: 243 SALAGLIVLTLVVYLIY 259
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,053,510
Number of Sequences: 27780
Number of extensions: 260505
Number of successful extensions: 707
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 702
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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