Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_O15
(774 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4D7.12c |fet5||transcription factor Fet5|Schizosaccharomyces... 228 6e-61
SPAC144.07c |||conserved eukaryotic protein|Schizosaccharomyces ... 123 2e-29
SPBC119.15 |||AAA family ATPase, unknown biological role|Schizos... 73 6e-14
SPAC23C4.14 |alg1||mannosyltransferase complex subunit Alg1 |Sch... 30 0.42
SPAPB1A10.07c |||sphingolipid biosynthesis protein|Schizosacchar... 25 0.67
SPCC1739.04c |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 29 0.98
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 3.0
SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyce... 27 3.0
SPBC1105.10 |rav1||RAVE complex subunit Rav1 |Schizosaccharomyce... 27 3.9
SPBC354.05c |sre2||membrane-tethered transcription factor |Schiz... 27 3.9
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 5.2
SPAC637.04 |||Cargo-transport protein Ypp1 |Schizosaccharomyces ... 26 6.9
>SPAC4D7.12c |fet5||transcription factor Fet5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 276
Score = 228 bits (558), Expect = 6e-61
Identities = 111/259 (42%), Positives = 171/259 (66%), Gaps = 5/259 (1%)
Frame = -1
Query: 774 TXCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMEDEELQFGPNGGL 595
T C ++ + R +VNLDPAAE+F++EP VDIR+LI +DD ME EL +GPNGGL
Sbjct: 18 TFCGALMSYMKSVGRSCHLVNLDPAAENFEWEPTVDIRDLISIDDVME--ELDYGPNGGL 75
Query: 594 VFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLLQ-NWNFRICV 418
++C E L+EN DWL E++GD D+DY++FD PGQIELYTH+P++ L+ LQ NFR C
Sbjct: 76 IYCFEFLMENLDWLNEEIGDYDEDYLIFDMPGQIELYTHVPILPALIRHLQVTLNFRPCA 135
Query: 417 VFLVDSQFMIDGAKFLSGTMAALSVMVNLELPHVNVLTKMDLL---SKTARKQIDNYLDP 247
V+L++SQF++D KF +G ++A+S MV +E+PH+N+L+KMDLL + + ++ +L+
Sbjct: 136 VYLLESQFLVDRTKFFAGVLSAMSAMVMMEVPHINLLSKMDLLKDNNNITKAELKRFLNT 195
Query: 246 DPHVLLSDM-RNAHSKWHEKYAKLTEAIGEVVENFSLVRXXPLNIRDEESXEKMMLTGDK 70
DP +L ++ + K+HE L I +++++F++V PL +EES +++ D
Sbjct: 196 DPLLLTGEINETTNPKFHE----LNRCIVQLIDDFNMVNFLPLESGNEESVSRVLSYIDD 251
Query: 69 MRQDGEDADVKIKDFDEVE 13
Q ED + K D E +
Sbjct: 252 ATQWYEDQEPKDPDRFEAD 270
>SPAC144.07c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 315
Score = 123 bits (297), Expect = 2e-29
Identities = 66/215 (30%), Positives = 129/215 (60%), Gaps = 3/215 (1%)
Frame = -1
Query: 720 VVNLDPAAEHFDYEPLVDIRELIHLDDAMEDEELQFGPNGGLVFCIETLLENSDWLEEQL 541
+VNLDPA + Y +DIR+++ ++ +D +L GPNG L++ +E + + +WL ++L
Sbjct: 35 IVNLDPANDFIKYPCAIDIRKVLDVEMIQKDYDL--GPNGALIYAMEAIEYHVEWLLKEL 92
Query: 540 GDVDDDYILFDCPGQIELYTHLPVMRRLVDLLQ-NWNFRICVVFLVDSQFMIDGAKFLSG 364
D Y++FDCPGQ+EL+T+ +++++ L+ ++R V LVD+ + + ++S
Sbjct: 93 KKHRDSYVIFDCPGQVELFTNHNSLQKIIKTLEKELDYRPVSVQLVDAYCCTNPSAYVSA 152
Query: 363 TMAALSVMVNLELPHVNVLTKMDLLSK--TARKQIDNYLDPDPHVLLSDMRNAHSKWHEK 190
+ L M+ L++PHVN+L+K DLL T ++D + + L+ + + K ++
Sbjct: 153 LLVCLKGMLQLDMPHVNILSKADLLCTYGTLPMKLDFFTEVQDLSYLAPLLD-RDKRLQR 211
Query: 189 YAKLTEAIGEVVENFSLVRXXPLNIRDEESXEKMM 85
Y+ L +AI E+VE+F+LV + + ++ S +++
Sbjct: 212 YSDLNKAICELVEDFNLVSFEVVAVENKASMLRVL 246
>SPBC119.15 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 367
Score = 72.5 bits (170), Expect = 6e-14
Identities = 59/239 (24%), Positives = 113/239 (47%), Gaps = 5/239 (2%)
Frame = -1
Query: 720 VVNLDPAAEHFDYEPLVDIRELIHLDDAMEDEELQFGPNGGLVFCIETLLENSDW----L 553
++NLDPA + YE +DIR+ I+ + M+ L GPNGG++ + + D L
Sbjct: 41 ILNLDPAVRNLPYEANIDIRDTINYKEVMKQYNL--GPNGGIMTSLNLFVTKFDQVLKIL 98
Query: 552 EEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLLQNWNFRICVVFLVDSQFMIDGAKF 373
E++ V D+IL D PGQIE++ + D L + ++ C+ ++VD+ + +
Sbjct: 99 EKRAPTV--DHILIDTPGQIEIFQWSASGSIICDTLAS-SWPTCIAYVVDTPRATSTSTW 155
Query: 372 LSGTMAALSVMVNLELPHVNVLTKMDLL-SKTARKQIDNYLDPDPHVLLSDMRNAHSKWH 196
+S + A S++ +LP + V K D+ S+ A+K + ++ + V + ++
Sbjct: 156 MSSMLYACSMLYKAKLPLIIVYNKCDVQDSEFAKKWMTDFEEFQQAVTKDEGMSSEGATS 215
Query: 195 EKYAKLTEAIGEVVENFSLVRXXPLNIRDEESXEKMMLTGDKMRQDGEDADVKIKDFDE 19
L ++ ++E F R + +TG+ M E K+K+++E
Sbjct: 216 GYMGSLVNSMSLMLEEF---------YRHLDFVSCSSVTGEGMDDFLEAVKAKVKEYEE 265
>SPAC23C4.14 |alg1||mannosyltransferase complex subunit Alg1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 424
Score = 29.9 bits (64), Expect = 0.42
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 486 YTHLPVMRRLVDLLQNWNFRICVV 415
Y HL V +R+ D+LQ W C V
Sbjct: 187 YAHLTVSKRMKDVLQTWGMNPCYV 210
>SPAPB1A10.07c |||sphingolipid biosynthesis
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 441
Score = 25.4 bits (53), Expect(2) = 0.67
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = -1
Query: 564 SDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMR 463
S W +L + Y+ FDC + Y+ + V R
Sbjct: 63 SSWFNSKLSKLSAGYLQFDCQNDGKCYSVIAVHR 96
Score = 22.2 bits (45), Expect(2) = 0.67
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Frame = -1
Query: 462 RLVDLLQN--WNFRICVVFLVDSQFMIDGAKFLSGTMAALSVMVNLELPHVNVLTKMDLL 289
R+ +QN W F+I + F++ KFLS +SVM + ++ +D
Sbjct: 120 RVAIKIQNGLWPFKIVLWFVLGIFSFFIPTKFLSFWGNIISVMGSALFIVYGLMLLVDFA 179
Query: 288 SKTARKQIDNYLDPD 244
A + +D L D
Sbjct: 180 HTWAERCVDRVLTSD 194
>SPCC1739.04c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 288
Score = 28.7 bits (61), Expect = 0.98
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = -1
Query: 411 LVDSQFMIDGAKFLSGTMAALSVMVNL-ELPHVNVLTKMDLLSKTARKQIDNYLDPDPHV 235
L SQ + +S + ++S ++ L ++ + + TK + K RK +++ DP+
Sbjct: 8 LTKSQELFGQISKISHSKISISELITLLDIHYSELFTKNPWMKKEVRKLASEFVENDPNH 67
Query: 234 LLSDMRNAH 208
LLS H
Sbjct: 68 LLSKQDACH 76
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 27.1 bits (57), Expect = 3.0
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Frame = +2
Query: 14 STSSKSFILTSASSPSCLILSPVSIIFSXLSSSRMFNGXXLTKLKFSTTS-PIASVSL-A 187
S++S S +S+S+ + LS S+I S SSS M + T + S++S P++S S +
Sbjct: 16 SSASSSIPASSSSAAASTSLSSSSVIPS--SSSSMLSSSSATAISSSSSSSPLSSSSFTS 73
Query: 188 YFSCHFE*AFLISDNNTCGSGSK*LSICFLAVLLSRS 298
S F + + S + S S L+ A L S S
Sbjct: 74 PASSSFITSLVSSSSQQSSSSSASLTSSSSATLTSSS 110
>SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 604
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -1
Query: 576 LLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPV 469
L++N D + G+++DD I+F P ++ Y H+ V
Sbjct: 380 LVQNKDMEVDDGGEIEDDAIVFSVPPTLQEY-HVSV 414
>SPBC1105.10 |rav1||RAVE complex subunit Rav1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1297
Score = 26.6 bits (56), Expect = 3.9
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 5 CSDSTSSKSFILTSASSPSCLILSPVSIIFSXLSSSR 115
C D SK ++ S S S IL+P + F S S+
Sbjct: 813 CCDEEISKDLLIKSLSQNSAEILNPAELDFEETSVSK 849
>SPBC354.05c |sre2||membrane-tethered transcription factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 793
Score = 26.6 bits (56), Expect = 3.9
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 543 VAPLTSQNSLRGSQYKTLDHHLVQIAIPHLP*HHQG 650
+ P +NSL S ++ HH PHLP +HQG
Sbjct: 146 IDPFEVKNSLHDSTDLSITHH------PHLPINHQG 175
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 26.2 bits (55), Expect = 5.2
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 4/142 (2%)
Frame = +2
Query: 8 SDSTSSKSFILTSASSPSCLILSPVSIIFSXLSSSR--MFNGXXLTKLKFSTTSPIASVS 181
S S++S S +S+SS + S SII S SSS ++ S++SP ++ S
Sbjct: 246 SSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSS 305
Query: 182 LAYFSCHFE*AFLISDNNTCGSGSK*LSICFLAVLLSRSILVRTLTC--GSSRFTITLNA 355
S +F ++T S S S F + S S + + + SS F+ T ++
Sbjct: 306 TISSSSSSSSSF----SSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSFSSTTSS 361
Query: 356 AIVPDKNFAPSIMNCESTKNTT 421
+ +F+ ++ + ST ++T
Sbjct: 362 S-KSSSSFSSTVSSSSSTSSST 382
Score = 25.8 bits (54), Expect = 6.9
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +2
Query: 8 SDSTSSKSFILTSASSPSCLILSPVSIIFSXLSSSRMFNGXXLTKLKFSTTSPIASVS 181
S STSS ++S SS + +P S S LSSS + + S+T +S+S
Sbjct: 179 SSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLS 236
>SPAC637.04 |||Cargo-transport protein Ypp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 862
Score = 25.8 bits (54), Expect = 6.9
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = -1
Query: 756 VKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMEDEELQ 616
+ + ++ K I + +L PA +PL+ +++ +A EDE+LQ
Sbjct: 63 IANVLEPKLIDNQYSLIPALPSARTDPLLSQLNSLNIQNATEDEKLQ 109
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,100,861
Number of Sequences: 5004
Number of extensions: 63543
Number of successful extensions: 203
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 195
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 373338084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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