Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_O15
(774 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC031024-1|AAH31024.1| 284|Homo sapiens ATP binding domain 1 fa... 297 3e-80
BX537973-1|CAD97937.1| 314|Homo sapiens hypothetical protein pr... 295 9e-80
AY364262-1|AAQ76821.1| 284|Homo sapiens protein x 0004 protein. 295 9e-80
AK223209-1|BAD96929.1| 284|Homo sapiens protein x 0004 variant ... 295 9e-80
AF117229-1|AAF17210.1| 284|Homo sapiens protein x 0004 protein. 295 9e-80
AY359078-1|AAQ89437.1| 284|Homo sapiens PRYA1876 protein. 295 1e-79
BC008416-1|AAH08416.1| 284|Homo sapiens ATP binding domain 1 fa... 295 2e-79
BC007815-1|AAH07815.1| 310|Homo sapiens ATP binding domain 1 fa... 177 4e-44
AY364261-1|AAQ76820.1| 310|Homo sapiens hypothetical protein pr... 177 4e-44
AY358864-1|AAQ89223.1| 310|Homo sapiens AGAA5828 protein. 177 4e-44
AL034380-4|CAB92117.1| 310|Homo sapiens novel protein protein. 177 4e-44
AK022535-1|BAB14084.1| 310|Homo sapiens protein ( Homo sapiens ... 177 4e-44
AK001211-1|BAA91556.1| 310|Homo sapiens protein ( Homo sapiens ... 177 4e-44
BC008634-1|AAH08634.1| 310|Homo sapiens ATP binding domain 1 fa... 176 6e-44
AL034380-3|CAI21619.1| 172|Homo sapiens novel protein protein. 76 1e-13
BC007451-1|AAH07451.1| 374|Homo sapiens XPA binding protein 1, ... 71 5e-12
AJ010842-1|CAA09376.1| 358|Homo sapiens ATP(GTP)-binding protei... 71 5e-12
AC074091-4|AAX93201.1| 374|Homo sapiens unknown protein. 71 5e-12
AB044661-1|BAB17612.1| 374|Homo sapiens XPA binding protein 1 p... 71 5e-12
AL034380-5|CAI21620.1| 131|Homo sapiens novel protein protein. 41 0.006
AM774227-1|CAO81740.1| 939|Homo sapiens collagen type VI alpha ... 31 4.6
>BC031024-1|AAH31024.1| 284|Homo sapiens ATP binding domain 1
family, member C protein.
Length = 284
Score = 297 bits (729), Expect = 3e-80
Identities = 143/255 (56%), Positives = 185/255 (72%)
Frame = -1
Query: 774 TXCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMEDEELQFGPNGGL 595
T C+T+V+H R V VVNLDPAAEHF+Y +VDIRELI +DD MED+ L+FGPNGGL
Sbjct: 18 TYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMVDIRELIEVDDVMEDDSLRFGPNGGL 77
Query: 594 VFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLLQNWNFRICVV 415
VFC+E N DWLE LG V+DDYILFDCPGQIELYTHLPVM++LV L+ W FR+C V
Sbjct: 78 VFCMEYFANNFDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKQLVQQLEQWEFRVCGV 137
Query: 414 FLVDSQFMIDGAKFLSGTMAALSVMVNLELPHVNVLTKMDLLSKTARKQIDNYLDPDPHV 235
FLVDSQFM++ KF+SG +AALS M++LE+P VN++TKMDLLSK A+K+I+ +LDPD +
Sbjct: 138 FLVDSQFMVESFKFISGILAALSAMISLEIPQVNIMTKMDLLSKKAKKEIEKFLDPDMYS 197
Query: 234 LLSDMRNAHSKWHEKYAKLTEAIGEVVENFSLVRXXPLNIRDEESXEKMMLTGDKMRQDG 55
LL D + +K+ KLT+AI +++++S+VR P + DEES ++ D Q G
Sbjct: 198 LLED--STSDLRSKKFKKLTKAICGLIDDYSMVRFLPYDQSDEESMNIVLQHIDFAIQYG 255
Query: 54 EDADVKIKDFDEVES 10
ED + K E ES
Sbjct: 256 EDLEFKEPKEREDES 270
>BX537973-1|CAD97937.1| 314|Homo sapiens hypothetical protein
protein.
Length = 314
Score = 295 bits (725), Expect = 9e-80
Identities = 142/255 (55%), Positives = 184/255 (72%)
Frame = -1
Query: 774 TXCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMEDEELQFGPNGGL 595
T C+T+V+H R V VVNLDPAAEHF+Y + DIRELI +DD MED+ L+FGPNGGL
Sbjct: 48 TYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDDVMEDDSLRFGPNGGL 107
Query: 594 VFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLLQNWNFRICVV 415
VFC+E N DWLE LG V+DDYILFDCPGQIELYTHLPVM++LV L+ W FR+C V
Sbjct: 108 VFCMEYFANNFDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKQLVQQLEQWEFRVCGV 167
Query: 414 FLVDSQFMIDGAKFLSGTMAALSVMVNLELPHVNVLTKMDLLSKTARKQIDNYLDPDPHV 235
FLVDSQFM++ KF+SG +AALS M++LE+P VN++TKMDLLSK A+K+I+ +LDPD +
Sbjct: 168 FLVDSQFMVESFKFISGILAALSAMISLEIPQVNIMTKMDLLSKKAKKEIEKFLDPDMYS 227
Query: 234 LLSDMRNAHSKWHEKYAKLTEAIGEVVENFSLVRXXPLNIRDEESXEKMMLTGDKMRQDG 55
LL D + +K+ KLT+AI +++++S+VR P + DEES ++ D Q G
Sbjct: 228 LLED--STSDLRSKKFKKLTKAICGLIDDYSMVRFLPYDQSDEESMNIVLQHIDFAIQYG 285
Query: 54 EDADVKIKDFDEVES 10
ED + K E ES
Sbjct: 286 EDLEFKEPKEREDES 300
>AY364262-1|AAQ76821.1| 284|Homo sapiens protein x 0004 protein.
Length = 284
Score = 295 bits (725), Expect = 9e-80
Identities = 142/255 (55%), Positives = 184/255 (72%)
Frame = -1
Query: 774 TXCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMEDEELQFGPNGGL 595
T C+T+V+H R V VVNLDPAAEHF+Y + DIRELI +DD MED+ L+FGPNGGL
Sbjct: 18 TYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDDVMEDDSLRFGPNGGL 77
Query: 594 VFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLLQNWNFRICVV 415
VFC+E N DWLE LG V+DDYILFDCPGQIELYTHLPVM++LV L+ W FR+C V
Sbjct: 78 VFCMEYFANNFDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKQLVQQLEQWEFRVCGV 137
Query: 414 FLVDSQFMIDGAKFLSGTMAALSVMVNLELPHVNVLTKMDLLSKTARKQIDNYLDPDPHV 235
FLVDSQFM++ KF+SG +AALS M++LE+P VN++TKMDLLSK A+K+I+ +LDPD +
Sbjct: 138 FLVDSQFMVESFKFISGILAALSAMISLEIPQVNIMTKMDLLSKKAKKEIEKFLDPDMYS 197
Query: 234 LLSDMRNAHSKWHEKYAKLTEAIGEVVENFSLVRXXPLNIRDEESXEKMMLTGDKMRQDG 55
LL D + +K+ KLT+AI +++++S+VR P + DEES ++ D Q G
Sbjct: 198 LLED--STSDLRSKKFKKLTKAICGLIDDYSMVRFLPYDQSDEESMNIVLQHIDFAIQYG 255
Query: 54 EDADVKIKDFDEVES 10
ED + K E ES
Sbjct: 256 EDLEFKEPKEREDES 270
>AK223209-1|BAD96929.1| 284|Homo sapiens protein x 0004 variant
protein.
Length = 284
Score = 295 bits (725), Expect = 9e-80
Identities = 142/255 (55%), Positives = 184/255 (72%)
Frame = -1
Query: 774 TXCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMEDEELQFGPNGGL 595
T C+T+V+H R V VVNLDPAAEHF+Y + DIRELI +DD MED+ L+FGPNGGL
Sbjct: 18 TYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDDVMEDDSLRFGPNGGL 77
Query: 594 VFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLLQNWNFRICVV 415
VFC+E N DWLE LG V+DDYILFDCPGQIELYTHLPVM++LV L+ W FR+C V
Sbjct: 78 VFCMEYFANNFDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKQLVQQLEQWEFRVCGV 137
Query: 414 FLVDSQFMIDGAKFLSGTMAALSVMVNLELPHVNVLTKMDLLSKTARKQIDNYLDPDPHV 235
FLVDSQFM++ KF+SG +AALS M++LE+P VN++TKMDLLSK A+K+I+ +LDPD +
Sbjct: 138 FLVDSQFMVESFKFISGILAALSAMISLEIPQVNIMTKMDLLSKKAKKEIEKFLDPDMYS 197
Query: 234 LLSDMRNAHSKWHEKYAKLTEAIGEVVENFSLVRXXPLNIRDEESXEKMMLTGDKMRQDG 55
LL D + +K+ KLT+AI +++++S+VR P + DEES ++ D Q G
Sbjct: 198 LLED--STSDLRSKKFKKLTKAICGLIDDYSMVRFLPYDQSDEESMNIVLQHIDFAIQYG 255
Query: 54 EDADVKIKDFDEVES 10
ED + K E ES
Sbjct: 256 EDLEFKEPKEREDES 270
>AF117229-1|AAF17210.1| 284|Homo sapiens protein x 0004 protein.
Length = 284
Score = 295 bits (725), Expect = 9e-80
Identities = 142/255 (55%), Positives = 184/255 (72%)
Frame = -1
Query: 774 TXCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMEDEELQFGPNGGL 595
T C+T+V+H R V VVNLDPAAEHF+Y + DIRELI +DD MED+ L+FGPNGGL
Sbjct: 18 TYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDDVMEDDSLRFGPNGGL 77
Query: 594 VFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLLQNWNFRICVV 415
VFC+E N DWLE LG V+DDYILFDCPGQIELYTHLPVM++LV L+ W FR+C V
Sbjct: 78 VFCMEYFANNFDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKQLVQQLEQWEFRVCGV 137
Query: 414 FLVDSQFMIDGAKFLSGTMAALSVMVNLELPHVNVLTKMDLLSKTARKQIDNYLDPDPHV 235
FLVDSQFM++ KF+SG +AALS M++LE+P VN++TKMDLLSK A+K+I+ +LDPD +
Sbjct: 138 FLVDSQFMVESFKFISGILAALSAMISLEIPQVNIMTKMDLLSKKAKKEIEKFLDPDMYS 197
Query: 234 LLSDMRNAHSKWHEKYAKLTEAIGEVVENFSLVRXXPLNIRDEESXEKMMLTGDKMRQDG 55
LL D + +K+ KLT+AI +++++S+VR P + DEES ++ D Q G
Sbjct: 198 LLED--STSDLRSKKFKKLTKAICGLIDDYSMVRFLPYDQSDEESMNIVLQHIDFAIQYG 255
Query: 54 EDADVKIKDFDEVES 10
ED + K E ES
Sbjct: 256 EDLEFKEPKEREDES 270
>AY359078-1|AAQ89437.1| 284|Homo sapiens PRYA1876 protein.
Length = 284
Score = 295 bits (724), Expect = 1e-79
Identities = 142/255 (55%), Positives = 183/255 (71%)
Frame = -1
Query: 774 TXCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMEDEELQFGPNGGL 595
T C+T+V+H R V VVNLDPAAEHF+Y + DIRELI +DD MED+ L+FGPNGGL
Sbjct: 18 TYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDDVMEDDSLRFGPNGGL 77
Query: 594 VFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLLQNWNFRICVV 415
VFC+E N DWLE LG V+DDYILFDCPGQIELYTHLPVM+ LV L+ W FR+C V
Sbjct: 78 VFCMEYFANNFDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKHLVQQLEQWEFRVCGV 137
Query: 414 FLVDSQFMIDGAKFLSGTMAALSVMVNLELPHVNVLTKMDLLSKTARKQIDNYLDPDPHV 235
FLVDSQFM++ KF+SG +AALS M++LE+P VN++TKMDLLSK A+K+I+ +LDPD +
Sbjct: 138 FLVDSQFMVESFKFISGILAALSAMISLEIPQVNIMTKMDLLSKKAKKEIEKFLDPDMYS 197
Query: 234 LLSDMRNAHSKWHEKYAKLTEAIGEVVENFSLVRXXPLNIRDEESXEKMMLTGDKMRQDG 55
LL D + +K+ KLT+AI +++++S+VR P + DEES ++ D Q G
Sbjct: 198 LLED--STSDLRSKKFKKLTKAICGLIDDYSMVRFLPYDQSDEESMNIVLQHIDFAIQYG 255
Query: 54 EDADVKIKDFDEVES 10
ED + K E ES
Sbjct: 256 EDLEFKEPKEREDES 270
>BC008416-1|AAH08416.1| 284|Homo sapiens ATP binding domain 1
family, member C protein.
Length = 284
Score = 295 bits (723), Expect = 2e-79
Identities = 142/255 (55%), Positives = 183/255 (71%)
Frame = -1
Query: 774 TXCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMEDEELQFGPNGGL 595
T C+T+V+H R V VVNLDPAAEHF+Y + DIRELI +DD MED+ L+FGPNGGL
Sbjct: 18 TYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDDVMEDDSLRFGPNGGL 77
Query: 594 VFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLLQNWNFRICVV 415
VFC+E N DWLE LG V+DDYILFDCPGQIELYTHLPVM++LV L+ W FR+C V
Sbjct: 78 VFCMEYFANNFDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKQLVQQLEQWEFRVCGV 137
Query: 414 FLVDSQFMIDGAKFLSGTMAALSVMVNLELPHVNVLTKMDLLSKTARKQIDNYLDPDPHV 235
FLVDSQFM++ KF+SG +AALS M++LE+P VN++TKMDLLSK A+K+I+ +LDPD +
Sbjct: 138 FLVDSQFMVESFKFISGILAALSAMISLEIPQVNIMTKMDLLSKKAKKEIEKFLDPDMYS 197
Query: 234 LLSDMRNAHSKWHEKYAKLTEAIGEVVENFSLVRXXPLNIRDEESXEKMMLTGDKMRQDG 55
LL D + +K+ KLT+AI +++++S+VR P + DEES + D Q G
Sbjct: 198 LLED--STSDLRSKKFKKLTKAICGLIDDYSMVRFLPYDQSDEESMNIALQHIDFAIQYG 255
Query: 54 EDADVKIKDFDEVES 10
ED + K E ES
Sbjct: 256 EDLEFKEPKEREDES 270
>BC007815-1|AAH07815.1| 310|Homo sapiens ATP binding domain 1
family, member B protein.
Length = 310
Score = 177 bits (431), Expect = 4e-44
Identities = 93/224 (41%), Positives = 137/224 (61%), Gaps = 3/224 (1%)
Frame = -1
Query: 732 RIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMEDEELQFGPNGGLVFCIETLLENSDWL 553
R V VVNLDPA E YE VD+ EL+ L D M+ L+ GPNGGL++C+E L N DWL
Sbjct: 38 RRVAVVNLDPANEGLPYECAVDVGELVGLGDVMD--ALRLGPNGGLLYCMEYLEANLDWL 95
Query: 552 EEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLLQNWNFRICVVFLVDSQFMIDGAKF 373
+L + Y LFDCPGQ+EL TH +R + + W+ R+ V LVDS + D AKF
Sbjct: 96 RAKLDPLRGHYFLFDCPGQVELCTHHGALRSIFSQMAQWDLRLTAVHLVDSHYCTDPAKF 155
Query: 372 LSGTMAALSVMVNLELPHVNVLTKMDLLSKTARK--QIDNYLDP-DPHVLLSDMRNAHSK 202
+S +L+ M+++ELPH+N+L+KMDL+ + +D Y + D LL + A
Sbjct: 156 ISVLCTSLATMLHVELPHINLLSKMDLIEHYGKLAFNLDYYTEVLDLSYLLDHL--ASDP 213
Query: 201 WHEKYAKLTEAIGEVVENFSLVRXXPLNIRDEESXEKMMLTGDK 70
+ Y +L E + +++E++SLV PLNI+D+ES ++++ DK
Sbjct: 214 FFRHYRQLNEKLVQLIEDYSLVSFIPLNIQDKESIQRVLQAVDK 257
>AY364261-1|AAQ76820.1| 310|Homo sapiens hypothetical protein
protein.
Length = 310
Score = 177 bits (431), Expect = 4e-44
Identities = 93/224 (41%), Positives = 137/224 (61%), Gaps = 3/224 (1%)
Frame = -1
Query: 732 RIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMEDEELQFGPNGGLVFCIETLLENSDWL 553
R V VVNLDPA E YE VD+ EL+ L D M+ L+ GPNGGL++C+E L N DWL
Sbjct: 38 RRVAVVNLDPANEGLPYECAVDVGELVGLGDVMD--ALRLGPNGGLLYCMEYLEANLDWL 95
Query: 552 EEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLLQNWNFRICVVFLVDSQFMIDGAKF 373
+L + Y LFDCPGQ+EL TH +R + + W+ R+ V LVDS + D AKF
Sbjct: 96 RAKLDPLRGHYFLFDCPGQVELCTHHGALRSIFSQMAQWDLRLTAVHLVDSHYCTDPAKF 155
Query: 372 LSGTMAALSVMVNLELPHVNVLTKMDLLSKTARK--QIDNYLDP-DPHVLLSDMRNAHSK 202
+S +L+ M+++ELPH+N+L+KMDL+ + +D Y + D LL + A
Sbjct: 156 ISVLCTSLATMLHVELPHINLLSKMDLIEHYGKLAFNLDYYTEVLDLSYLLDHL--ASDP 213
Query: 201 WHEKYAKLTEAIGEVVENFSLVRXXPLNIRDEESXEKMMLTGDK 70
+ Y +L E + +++E++SLV PLNI+D+ES ++++ DK
Sbjct: 214 FFRHYRQLNEKLVQLIEDYSLVSFIPLNIQDKESIQRVLQAVDK 257
>AY358864-1|AAQ89223.1| 310|Homo sapiens AGAA5828 protein.
Length = 310
Score = 177 bits (431), Expect = 4e-44
Identities = 93/224 (41%), Positives = 137/224 (61%), Gaps = 3/224 (1%)
Frame = -1
Query: 732 RIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMEDEELQFGPNGGLVFCIETLLENSDWL 553
R V VVNLDPA E YE VD+ EL+ L D M+ L+ GPNGGL++C+E L N DWL
Sbjct: 38 RRVAVVNLDPANEGLPYECAVDVGELVGLGDVMD--ALRLGPNGGLLYCMEYLEANLDWL 95
Query: 552 EEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLLQNWNFRICVVFLVDSQFMIDGAKF 373
+L + Y LFDCPGQ+EL TH +R + + W+ R+ V LVDS + D AKF
Sbjct: 96 RAKLDPLRGHYFLFDCPGQVELCTHHGALRSIFSQMAQWDLRLTAVHLVDSHYCTDPAKF 155
Query: 372 LSGTMAALSVMVNLELPHVNVLTKMDLLSKTARK--QIDNYLDP-DPHVLLSDMRNAHSK 202
+S +L+ M+++ELPH+N+L+KMDL+ + +D Y + D LL + A
Sbjct: 156 ISVLCTSLATMLHVELPHINLLSKMDLIEHYGKLAFNLDYYTEVLDLSYLLDHL--ASDP 213
Query: 201 WHEKYAKLTEAIGEVVENFSLVRXXPLNIRDEESXEKMMLTGDK 70
+ Y +L E + +++E++SLV PLNI+D+ES ++++ DK
Sbjct: 214 FFRHYRQLNEKLVQLIEDYSLVSFIPLNIQDKESIQRVLQAVDK 257
>AL034380-4|CAB92117.1| 310|Homo sapiens novel protein protein.
Length = 310
Score = 177 bits (431), Expect = 4e-44
Identities = 93/224 (41%), Positives = 137/224 (61%), Gaps = 3/224 (1%)
Frame = -1
Query: 732 RIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMEDEELQFGPNGGLVFCIETLLENSDWL 553
R V VVNLDPA E YE VD+ EL+ L D M+ L+ GPNGGL++C+E L N DWL
Sbjct: 38 RRVAVVNLDPANEGLPYECAVDVGELVGLGDVMD--ALRLGPNGGLLYCMEYLEANLDWL 95
Query: 552 EEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLLQNWNFRICVVFLVDSQFMIDGAKF 373
+L + Y LFDCPGQ+EL TH +R + + W+ R+ V LVDS + D AKF
Sbjct: 96 RAKLDPLRGHYFLFDCPGQVELCTHHGALRSIFSQMAQWDLRLTAVHLVDSHYCTDPAKF 155
Query: 372 LSGTMAALSVMVNLELPHVNVLTKMDLLSKTARK--QIDNYLDP-DPHVLLSDMRNAHSK 202
+S +L+ M+++ELPH+N+L+KMDL+ + +D Y + D LL + A
Sbjct: 156 ISVLCTSLATMLHVELPHINLLSKMDLIEHYGKLAFNLDYYTEVLDLSYLLDHL--ASDP 213
Query: 201 WHEKYAKLTEAIGEVVENFSLVRXXPLNIRDEESXEKMMLTGDK 70
+ Y +L E + +++E++SLV PLNI+D+ES ++++ DK
Sbjct: 214 FFRHYRQLNEKLVQLIEDYSLVSFIPLNIQDKESIQRVLQAVDK 257
>AK022535-1|BAB14084.1| 310|Homo sapiens protein ( Homo sapiens
cDNA FLJ12473 fis, clone NT2RM1000924, weakly similar to
HYPOTHETICAL 39.7 KD PROTEIN C34E10.2 IN CHROMOSOME III.
).
Length = 310
Score = 177 bits (431), Expect = 4e-44
Identities = 93/224 (41%), Positives = 137/224 (61%), Gaps = 3/224 (1%)
Frame = -1
Query: 732 RIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMEDEELQFGPNGGLVFCIETLLENSDWL 553
R V VVNLDPA E YE VD+ EL+ L D M+ L+ GPNGGL++C+E L N DWL
Sbjct: 38 RRVAVVNLDPANEGLPYECAVDVGELVGLGDVMD--ALRLGPNGGLLYCMEYLEANLDWL 95
Query: 552 EEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLLQNWNFRICVVFLVDSQFMIDGAKF 373
+L + Y LFDCPGQ+EL TH +R + + W+ R+ V LVDS + D AKF
Sbjct: 96 RAKLDPLRGHYFLFDCPGQVELCTHHGALRSIFSQMAQWDLRLTAVHLVDSHYCTDPAKF 155
Query: 372 LSGTMAALSVMVNLELPHVNVLTKMDLLSKTARK--QIDNYLDP-DPHVLLSDMRNAHSK 202
+S +L+ M+++ELPH+N+L+KMDL+ + +D Y + D LL + A
Sbjct: 156 ISVLCTSLATMLHVELPHINLLSKMDLIEHYGKLAFNLDYYTEVLDLSYLLDHL--ASDP 213
Query: 201 WHEKYAKLTEAIGEVVENFSLVRXXPLNIRDEESXEKMMLTGDK 70
+ Y +L E + +++E++SLV PLNI+D+ES ++++ DK
Sbjct: 214 FFRHYRQLNEKLVQLIEDYSLVSFIPLNIQDKESIQRVLQAVDK 257
>AK001211-1|BAA91556.1| 310|Homo sapiens protein ( Homo sapiens
cDNA FLJ10349 fis, clone NT2RM2001100. ).
Length = 310
Score = 177 bits (431), Expect = 4e-44
Identities = 93/224 (41%), Positives = 137/224 (61%), Gaps = 3/224 (1%)
Frame = -1
Query: 732 RIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMEDEELQFGPNGGLVFCIETLLENSDWL 553
R V VVNLDPA E YE VD+ EL+ L D M+ L+ GPNGGL++C+E L N DWL
Sbjct: 38 RRVAVVNLDPANEGLPYECAVDVGELVGLGDVMD--ALRLGPNGGLLYCMEYLEANLDWL 95
Query: 552 EEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLLQNWNFRICVVFLVDSQFMIDGAKF 373
+L + Y LFDCPGQ+EL TH +R + + W+ R+ V LVDS + D AKF
Sbjct: 96 RAKLDPLRGHYFLFDCPGQVELCTHHGALRSIFSQMAQWDLRLTAVHLVDSHYCTDPAKF 155
Query: 372 LSGTMAALSVMVNLELPHVNVLTKMDLLSKTARK--QIDNYLDP-DPHVLLSDMRNAHSK 202
+S +L+ M+++ELPH+N+L+KMDL+ + +D Y + D LL + A
Sbjct: 156 ISVLCTSLATMLHVELPHINLLSKMDLIEHYGKLAFNLDYYTEVLDLSYLLDHL--ASDP 213
Query: 201 WHEKYAKLTEAIGEVVENFSLVRXXPLNIRDEESXEKMMLTGDK 70
+ Y +L E + +++E++SLV PLNI+D+ES ++++ DK
Sbjct: 214 FFRHYRQLNEKLVQLIEDYSLVSFIPLNIQDKESIQRVLQAVDK 257
>BC008634-1|AAH08634.1| 310|Homo sapiens ATP binding domain 1
family, member B protein.
Length = 310
Score = 176 bits (429), Expect = 6e-44
Identities = 93/224 (41%), Positives = 136/224 (60%), Gaps = 3/224 (1%)
Frame = -1
Query: 732 RIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMEDEELQFGPNGGLVFCIETLLENSDWL 553
R V VVNLDPA E YE VD+ EL+ L D M+ L+ GPNGGL++C+E L N DWL
Sbjct: 38 RRVAVVNLDPANEGLPYECAVDVGELVGLGDVMD--ALRLGPNGGLLYCMEYLEANLDWL 95
Query: 552 EEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLLQNWNFRICVVFLVDSQFMIDGAKF 373
+L + Y LFDCPGQ+EL TH +R + + W+ R+ V LVDS + D AKF
Sbjct: 96 RAKLDPLRGHYFLFDCPGQVELCTHHGALRSIFSQMAQWDLRLTAVHLVDSHYCTDPAKF 155
Query: 372 LSGTMAALSVMVNLELPHVNVLTKMDLLSKTARK--QIDNYLDP-DPHVLLSDMRNAHSK 202
+S +L+ M+++ELPH+N+L+KMDL+ + +D Y + D LL + A
Sbjct: 156 ISVLCTSLATMLHVELPHINLLSKMDLIEHYGKLAFNLDYYTEVLDLSYLLDHL--ASDP 213
Query: 201 WHEKYAKLTEAIGEVVENFSLVRXXPLNIRDEESXEKMMLTGDK 70
+ Y +L E + ++E++SLV PLNI+D+ES ++++ DK
Sbjct: 214 FFRHYRQLNEKLVRLIEDYSLVSFIPLNIQDKESIQRVLQAVDK 257
>AL034380-3|CAI21619.1| 172|Homo sapiens novel protein protein.
Length = 172
Score = 76.2 bits (179), Expect = 1e-13
Identities = 41/115 (35%), Positives = 68/115 (59%), Gaps = 3/115 (2%)
Frame = -1
Query: 447 LQNWNFRICVVFLVDSQFMIDGAKFLSGTMAALSVMVNLELPHVNVLTKMDLLSKTARK- 271
+ W+ R+ V LVDS + D AKF+S +L+ M+++ELPH+N+L+KMDL+ +
Sbjct: 60 MAQWDLRLTAVHLVDSHYCTDPAKFISVLCTSLATMLHVELPHINLLSKMDLIEHYGKLA 119
Query: 270 -QIDNYLDP-DPHVLLSDMRNAHSKWHEKYAKLTEAIGEVVENFSLVRXXPLNIR 112
+D Y + D LL + A + Y +L E + +++E++SLV PLNI+
Sbjct: 120 FNLDYYTEVLDLSYLLDHL--ASDPFFRHYRQLNEKLVQLIEDYSLVSFIPLNIQ 172
>BC007451-1|AAH07451.1| 374|Homo sapiens XPA binding protein 1,
GTPase protein.
Length = 374
Score = 70.9 bits (166), Expect = 5e-12
Identities = 40/146 (27%), Positives = 75/146 (51%), Gaps = 2/146 (1%)
Frame = -1
Query: 720 VVNLDPAAEHFDYEPLVDIRELIHLDDAMEDEELQFGPNGGLVFCIETLLENSDWLEEQL 541
V+NLDPA + +DIR+ + + M+ L GPNGG+V + D + + +
Sbjct: 52 VINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL--GPNGGIVTSLNLFATRFDQVMKFI 109
Query: 540 GDVDD--DYILFDCPGQIELYTHLPVMRRLVDLLQNWNFRICVVFLVDSQFMIDGAKFLS 367
+ Y+L D PGQIE++T + + L + +F V++++D+ + F+S
Sbjct: 110 EKAQNMSKYVLIDTPGQIEVFTWSASGTIITEALAS-SFPTVVIYVMDTSRSTNPVTFMS 168
Query: 366 GTMAALSVMVNLELPHVNVLTKMDLL 289
+ A S++ +LP + V+ K D++
Sbjct: 169 NMLYACSILYKTKLPFIVVMNKTDII 194
>AJ010842-1|CAA09376.1| 358|Homo sapiens ATP(GTP)-binding protein
protein.
Length = 358
Score = 70.9 bits (166), Expect = 5e-12
Identities = 40/146 (27%), Positives = 75/146 (51%), Gaps = 2/146 (1%)
Frame = -1
Query: 720 VVNLDPAAEHFDYEPLVDIRELIHLDDAMEDEELQFGPNGGLVFCIETLLENSDWLEEQL 541
V+NLDPA + +DIR+ + + M+ L GPNGG+V + D + + +
Sbjct: 36 VINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL--GPNGGIVTSLNLFATRFDQVMKFI 93
Query: 540 GDVDD--DYILFDCPGQIELYTHLPVMRRLVDLLQNWNFRICVVFLVDSQFMIDGAKFLS 367
+ Y+L D PGQIE++T + + L + +F V++++D+ + F+S
Sbjct: 94 EKAQNMSKYVLIDTPGQIEVFTWSASGTIITEALAS-SFPTVVIYVMDTSRSTNPVTFMS 152
Query: 366 GTMAALSVMVNLELPHVNVLTKMDLL 289
+ A S++ +LP + V+ K D++
Sbjct: 153 NMLYACSILYKTKLPFIVVMNKTDII 178
>AC074091-4|AAX93201.1| 374|Homo sapiens unknown protein.
Length = 374
Score = 70.9 bits (166), Expect = 5e-12
Identities = 40/146 (27%), Positives = 75/146 (51%), Gaps = 2/146 (1%)
Frame = -1
Query: 720 VVNLDPAAEHFDYEPLVDIRELIHLDDAMEDEELQFGPNGGLVFCIETLLENSDWLEEQL 541
V+NLDPA + +DIR+ + + M+ L GPNGG+V + D + + +
Sbjct: 52 VINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL--GPNGGIVTSLNLFATRFDQVMKFI 109
Query: 540 GDVDD--DYILFDCPGQIELYTHLPVMRRLVDLLQNWNFRICVVFLVDSQFMIDGAKFLS 367
+ Y+L D PGQIE++T + + L + +F V++++D+ + F+S
Sbjct: 110 EKAQNMSKYVLIDTPGQIEVFTWSASGTIITEALAS-SFPTVVIYVMDTSRSTNPVTFMS 168
Query: 366 GTMAALSVMVNLELPHVNVLTKMDLL 289
+ A S++ +LP + V+ K D++
Sbjct: 169 NMLYACSILYKTKLPFIVVMNKTDII 194
>AB044661-1|BAB17612.1| 374|Homo sapiens XPA binding protein 1
protein.
Length = 374
Score = 70.9 bits (166), Expect = 5e-12
Identities = 40/146 (27%), Positives = 75/146 (51%), Gaps = 2/146 (1%)
Frame = -1
Query: 720 VVNLDPAAEHFDYEPLVDIRELIHLDDAMEDEELQFGPNGGLVFCIETLLENSDWLEEQL 541
V+NLDPA + +DIR+ + + M+ L GPNGG+V + D + + +
Sbjct: 52 VINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL--GPNGGIVTSLNLFATRFDQVMKFI 109
Query: 540 GDVDD--DYILFDCPGQIELYTHLPVMRRLVDLLQNWNFRICVVFLVDSQFMIDGAKFLS 367
+ Y+L D PGQIE++T + + L + +F V++++D+ + F+S
Sbjct: 110 EKAQNMSKYVLIDTPGQIEVFTWSASGTIITEALAS-SFPTVVIYVMDTSRSTNPVTFMS 168
Query: 366 GTMAALSVMVNLELPHVNVLTKMDLL 289
+ A S++ +LP + V+ K D++
Sbjct: 169 NMLYACSILYKTKLPFIVVMNKTDII 194
>AL034380-5|CAI21620.1| 131|Homo sapiens novel protein protein.
Length = 131
Score = 40.7 bits (91), Expect = 0.006
Identities = 26/82 (31%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = -1
Query: 312 VLTKMDLLSKTARKQIDNYLDP-DPHVLLSDMRNAHSKWHEKYAKLTEAIGEVVENFSLV 136
+L ++LL T+ +D Y + D LL + A + Y +L E + +++E++SLV
Sbjct: 1 MLAGLELL--TSAFNLDYYTEVLDLSYLLDHL--ASDPFFRHYRQLNEKLVQLIEDYSLV 56
Query: 135 RXXPLNIRDEESXEKMMLTGDK 70
PLNI+D+ES ++++ DK
Sbjct: 57 SFIPLNIQDKESIQRVLQAVDK 78
>AM774227-1|CAO81740.1| 939|Homo sapiens collagen type VI alpha 6
protein.
Length = 939
Score = 31.1 bits (67), Expect = 4.6
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = +3
Query: 543 VAPLTSQNSLRGSQYKTLDHHLVQIAIPHLP*HHQGVLIL*CLRVAHSQSVQLLDPSLLH 722
+ P+ L LDHHLVQ+ H P H GV + + +++ P L
Sbjct: 796 LGPIWDDKELEDLASHPLDHHLVQLGRIHKPDHSYGVKFVKSFINSIRRAINKYPPINLK 855
Query: 723 LQC 731
++C
Sbjct: 856 IKC 858
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,769,662
Number of Sequences: 237096
Number of extensions: 2190092
Number of successful extensions: 3985
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3953
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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