Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_O15
         (774 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    25   1.0  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    23   2.4  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    23   2.4  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   5.5  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              22   7.3  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              22   7.3  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   9.6  

>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +1

Query: 691 VFSCWIQVYYI 723
           V SCW+ VYYI
Sbjct: 68  VMSCWMNVYYI 78


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1

Query: 691 VFSCWIQVYYI 723
           V SCW  +YYI
Sbjct: 106 VLSCWTNIYYI 116


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1

Query: 691 VFSCWIQVYYI 723
           V SCW  +YYI
Sbjct: 159 VLSCWTNIYYI 169


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 207 SKWHEKYAKLTEAIGEV 157
           S +HE++  L  A+GE+
Sbjct: 485 SNYHEEFQSLNNAVGEM 501


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 376 IFIRYNGCIKCNGESGT 326
           I+IR+N  +KC G+  T
Sbjct: 112 IYIRFNKLVKCFGKYKT 128


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 376 IFIRYNGCIKCNGESGT 326
           I+IR+N  +KC G+  T
Sbjct: 112 IYIRFNKLVKCFGKYKT 128


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 366 LIKILHHQS*TASPLRTLHIS*SS 437
           L++ LHH    A   RTLH++ +S
Sbjct: 147 LMRCLHHDIENAHIRRTLHMNRTS 170


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,953
Number of Sequences: 438
Number of extensions: 3907
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)