Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_O12
         (779 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0555 - 10588685-10592038                                         31   1.4  
08_02_0167 - 13564466-13566227,13566361-13566644,13566684-135675...    31   1.4  
10_07_0032 + 12096290-12097042,12097056-12098066,12110194-12110454     30   2.4  
10_04_0010 - 7487455-7489490,7489569-7489980                           30   2.4  
03_02_1029 - 13488535-13493037                                         30   2.4  
12_01_0026 + 219663-220843,222201-222447,222574-224535                 28   9.6  
11_01_0026 + 193383-194566,195726-195972,196099-198063                 28   9.6  
01_07_0262 + 42378465-42378634,42379100-42379230,42379307-423794...    28   9.6  
01_04_0007 - 15038268-15039062,15039177-15039711,15039887-150399...    28   9.6  

>09_02_0555 - 10588685-10592038
          Length = 1117

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 12/43 (27%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = -3

Query: 588 IHYSSSELYISVHVQFWSNASVRNLTEFI--CFIC*KCKASFE 466
           IH  S+++Y+++  ++W  +  R + EF+  C +C + KA  +
Sbjct: 698 IHSGSTKMYLNLKEKYWWVSMKREIAEFVALCDVCQRVKAEHQ 740


>08_02_0167 -
           13564466-13566227,13566361-13566644,13566684-13567540,
           13567684-13567957,13567973-13568218
          Length = 1140

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = -3

Query: 588 IHYSSSELYISVHVQFWSNASVRNLTEFI--CFIC*KCKASFE 466
           IH  S+++Y+ +  ++W  +  R +TEF+  C +C   KA  +
Sbjct: 748 IHPGSTKMYLDMKEKYWWVSMKREITEFVALCEVCQHVKAEHQ 790


>10_07_0032 + 12096290-12097042,12097056-12098066,12110194-12110454
          Length = 674

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 12/43 (27%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = -3

Query: 588 IHYSSSELYISVHVQFWSNASVRNLTEFI--CFIC*KCKASFE 466
           IH  S+++Y+ +  ++W  +  R + EF+  C +C + KA  +
Sbjct: 279 IHPGSTKMYLDLKEKYWWVSMKREIAEFVALCDVCQRVKAEHQ 321


>10_04_0010 - 7487455-7489490,7489569-7489980
          Length = 815

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 12/43 (27%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = -3

Query: 588 IHYSSSELYISVHVQFWSNASVRNLTEFI--CFIC*KCKASFE 466
           IH  S+++Y+ +  ++W  +  R + EF+  C +C + KA  +
Sbjct: 441 IHPGSTKMYLDLKEKYWWVSMKREIAEFVALCDVCQRVKAEHQ 483


>03_02_1029 - 13488535-13493037
          Length = 1500

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 12/43 (27%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = -3

Query: 588  IHYSSSELYISVHVQFWSNASVRNLTEFI--CFIC*KCKASFE 466
            IH  S+++Y+ +  ++W  +  R + EF+  C +C + KA  +
Sbjct: 1081 IHPGSTKMYLDLKEKYWWVSMKREIAEFVALCDVCQRVKAEHQ 1123


>12_01_0026 + 219663-220843,222201-222447,222574-224535
          Length = 1129

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -3

Query: 621 RNKIQFFLRHLIHYSSSEL-YISVHVQFWSNASVRNLTEFICFI 493
           + +I   L  L+H S   L Y+ +++Q W ++S R  T   C +
Sbjct: 777 KKRIAVALAELMHGSKENLIYLDLNLQDWDDSSFRGKTGIDCIV 820


>11_01_0026 + 193383-194566,195726-195972,196099-198063
          Length = 1131

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -3

Query: 621 RNKIQFFLRHLIHYSSSEL-YISVHVQFWSNASVRNLTEFICFI 493
           + +I   L  L+H S   L Y+ +++Q W ++S R  T   C +
Sbjct: 778 KKRIAVALAELMHGSKDNLIYLDLNLQDWDDSSFRGKTGIDCIV 821


>01_07_0262 +
           42378465-42378634,42379100-42379230,42379307-42379466,
           42379547-42379850,42379936-42380037,42380583-42380606
          Length = 296

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 11/31 (35%), Positives = 22/31 (70%)
 Frame = +1

Query: 334 RHYDRKYIDNQWREVKVKRLHYGNL*VQNRY 426
           R+ +R+ I+  W E++V  L++GN+ ++N Y
Sbjct: 53  RYINRQIIEG-WEELRVNGLYHGNICLENVY 82


>01_04_0007 -
           15038268-15039062,15039177-15039711,15039887-15039936,
           15040376-15040446,15040683-15040731
          Length = 499

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = -3

Query: 597 RHLIHYSSSELYISVHVQFWSNASVRNLTEFI--CFIC*KCKASFE 466
           ++ IH  S+++Y  +  +FW     R + EF+  C +C + KA  +
Sbjct: 115 QYSIHPGSTKMYQDLKEKFWWVNMRREIAEFVALCDVCQRVKAEHQ 160


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,915,009
Number of Sequences: 37544
Number of extensions: 294747
Number of successful extensions: 556
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 556
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)