Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_O07
(801 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000262-5|AAN60522.1| 100|Caenorhabditis elegans Hypothetical ... 71 7e-13
AL132952-4|CAB61136.1| 185|Caenorhabditis elegans Hypothetical ... 44 2e-04
U12965-1|AAA20611.1| 176|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z66497-4|CAA91284.1| 401|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z78060-5|CAB01492.1| 216|Caenorhabditis elegans Hypothetical pr... 37 0.015
U00052-3|AAK21426.1| 308|Caenorhabditis elegans Hypothetical pr... 37 0.015
AL022271-2|CAA18350.1| 216|Caenorhabditis elegans Hypothetical ... 37 0.015
AL032627-7|CAD56256.1| 306|Caenorhabditis elegans Hypothetical ... 34 0.10
AL032627-6|CAD56255.1| 331|Caenorhabditis elegans Hypothetical ... 34 0.10
AL032627-5|CAD45607.2| 314|Caenorhabditis elegans Hypothetical ... 34 0.10
AL032627-4|CAB54382.2| 327|Caenorhabditis elegans Hypothetical ... 34 0.10
AL032627-3|CAB54381.2| 325|Caenorhabditis elegans Hypothetical ... 34 0.10
AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans hom... 34 0.10
AC025723-7|AAN84833.1| 619|Caenorhabditis elegans C.elegans hom... 34 0.10
AC025723-6|AAN84834.1| 621|Caenorhabditis elegans C.elegans hom... 34 0.10
AB081596-1|BAC19843.1| 325|Caenorhabditis elegans cyclic AMP-re... 34 0.10
AB081595-1|BAC19842.1| 306|Caenorhabditis elegans cyclic AMP-re... 34 0.10
AF039713-13|AAB96719.2| 690|Caenorhabditis elegans Hypothetical... 33 0.18
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 33 0.31
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 33 0.31
Z81107-9|CAB03234.2| 304|Caenorhabditis elegans Hypothetical pr... 32 0.55
Z68335-4|CAA92732.2| 304|Caenorhabditis elegans Hypothetical pr... 32 0.55
U58727-1|AAB00581.1| 358|Caenorhabditis elegans Hypothetical pr... 31 0.73
AF078789-3|AAK68487.1| 295|Caenorhabditis elegans Hypothetical ... 31 0.96
AF078789-2|AAK21516.1| 318|Caenorhabditis elegans Hypothetical ... 31 0.96
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 29 3.9
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 29 3.9
Z81557-7|CAB04538.1| 421|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 28 6.8
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 28 6.8
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 28 6.8
AL117203-12|CAB60423.1| 487|Caenorhabditis elegans Hypothetical... 28 6.8
AC006835-1|AAF40015.2| 903|Caenorhabditis elegans Hypothetical ... 28 6.8
Z74033-5|CAF31473.1| 333|Caenorhabditis elegans Hypothetical pr... 28 8.9
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 28 8.9
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 28 8.9
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 28 8.9
>AF000262-5|AAN60522.1| 100|Caenorhabditis elegans Hypothetical
protein C48E7.11 protein.
Length = 100
Score = 71.3 bits (167), Expect = 7e-13
Identities = 32/65 (49%), Positives = 44/65 (67%)
Frame = -2
Query: 686 YXKRRNRNNEAVKKSRFKSKQRTQETFSRVSKLKAENQVLEEKVKTLSKQLQFLKDLFFA 507
Y +R RNNEAV ++R K +Q +T +V +LK EN+ LE KV+ L K+L FLK++F A
Sbjct: 20 YSTKRKRNNEAVNRTRQKKRQEENDTAEKVDELKKENETLERKVEQLQKELSFLKEMFMA 79
Query: 506 QAKKD 492
AK D
Sbjct: 80 YAKND 84
>AL132952-4|CAB61136.1| 185|Caenorhabditis elegans Hypothetical
protein Y51H4A.4 protein.
Length = 185
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/61 (39%), Positives = 33/61 (54%)
Frame = -2
Query: 686 YXKRRNRNNEAVKKSRFKSKQRTQETFSRVSKLKAENQVLEEKVKTLSKQLQFLKDLFFA 507
Y RR RNNEA +KSR K+ Q+ RV+ L+ ENQ L V+ L Q + ++
Sbjct: 106 YLDRRRRNNEAARKSRESRKKVDQDNSVRVTYLERENQCLRVYVQQLQLQNESMRQHLLL 165
Query: 506 Q 504
Q
Sbjct: 166 Q 166
>U12965-1|AAA20611.1| 176|Caenorhabditis elegans Hypothetical
protein F23F12.9a protein.
Length = 176
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = -2
Query: 686 YXKRRNRNNEAVKKSRFKSKQRTQETFSRVSKLKAENQVLEEKVKTLSKQL 534
Y ++R +NNEA KKSR K R Q+ + LK +N LEE++K +L
Sbjct: 68 YLEKRMKNNEAAKKSRASRKHREQKNQTENELLKRKNAALEEELKQAKCEL 118
>Z66497-4|CAA91284.1| 401|Caenorhabditis elegans Hypothetical
protein K08F8.2 protein.
Length = 401
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/70 (30%), Positives = 36/70 (51%)
Frame = -2
Query: 758 NFYDMPPVKRGKRGVSXXXXXXXDYXKRRNRNNEAVKKSRFKSKQRTQETFSRVSKLKAE 579
NF + P + + V+ Y +RR RNN+A ++SR K +Q ++ L AE
Sbjct: 33 NFSEGSPPESRRNSVNESVIKDEHYWERRRRNNDASRRSREKRRQNDLAMEEKIMLLSAE 92
Query: 578 NQVLEEKVKT 549
N+ L+ ++ T
Sbjct: 93 NERLKSQLGT 102
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = -2
Query: 686 YXKRRNRNNEAVKKSRFKSKQRTQETFSRVSKLKAENQVLEEKVKTLSKQLQFLKDLFFA 507
Y RR RNNEA K+ R + + RV L+ EN+ L +++TL ++ K +
Sbjct: 332 YVDRRRRNNEAAKRCRANRRAVFEYRSRRVQLLEGENEDLRTQIETLKAEIAHFKSVLAQ 391
Query: 506 QA 501
+A
Sbjct: 392 RA 393
>Z78060-5|CAB01492.1| 216|Caenorhabditis elegans Hypothetical
protein C34D1.5 protein.
Length = 216
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/69 (27%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -2
Query: 680 KRRNRNNEAVKKSRFKSKQRTQETFSRVSKLKAENQVL-EEKVKTLSKQLQFLKDLFFAQ 504
K+R RN EA ++ R K K++T + + +++L A N+V+ + +++ LS+ + ++ L +
Sbjct: 113 KKRLRNTEAARRCREKIKRKTDDLETELTRLTARNEVMNQHRIRLLSQVEEQMRMLENIK 172
Query: 503 AKKDTTELE 477
++ E E
Sbjct: 173 SRNPELEAE 181
>U00052-3|AAK21426.1| 308|Caenorhabditis elegans Hypothetical
protein K02F3.4 protein.
Length = 308
Score = 37.1 bits (82), Expect = 0.015
Identities = 23/81 (28%), Positives = 40/81 (49%)
Frame = -2
Query: 737 VKRGKRGVSXXXXXXXDYXKRRNRNNEAVKKSRFKSKQRTQETFSRVSKLKAENQVLEEK 558
+ RG++ S DY +R++NN A +KSR K + + +E+ +L+ L+
Sbjct: 228 ITRGRKTSSVSSDSSSDYRHKRDKNNLASQKSRQKRQAKIRESKEERERLEKRKVQLQAM 287
Query: 557 VKTLSKQLQFLKDLFFAQAKK 495
V TL Q++ K L K+
Sbjct: 288 VLTLETQVEDYKRLVMMFVKR 308
>AL022271-2|CAA18350.1| 216|Caenorhabditis elegans Hypothetical
protein C34D1.5 protein.
Length = 216
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/69 (27%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -2
Query: 680 KRRNRNNEAVKKSRFKSKQRTQETFSRVSKLKAENQVL-EEKVKTLSKQLQFLKDLFFAQ 504
K+R RN EA ++ R K K++T + + +++L A N+V+ + +++ LS+ + ++ L +
Sbjct: 113 KKRLRNTEAARRCREKIKRKTDDLETELTRLTARNEVMNQHRIRLLSQVEEQMRMLENIK 172
Query: 503 AKKDTTELE 477
++ E E
Sbjct: 173 SRNPELEAE 181
>AL032627-7|CAD56256.1| 306|Caenorhabditis elegans Hypothetical
protein Y41C4A.4e protein.
Length = 306
Score = 34.3 bits (75), Expect = 0.10
Identities = 20/50 (40%), Positives = 32/50 (64%)
Frame = -2
Query: 668 RNNEAVKKSRFKSKQRTQETFSRVSKLKAENQVLEEKVKTLSKQLQFLKD 519
+N EA K+ R K K+ + +RVS L+ +N+ L E++KTL K+L K+
Sbjct: 254 KNREAAKECRRKKKEYVKCLENRVSVLENQNKALIEELKTL-KELYCRKE 302
>AL032627-6|CAD56255.1| 331|Caenorhabditis elegans Hypothetical
protein Y41C4A.4d protein.
Length = 331
Score = 34.3 bits (75), Expect = 0.10
Identities = 20/50 (40%), Positives = 32/50 (64%)
Frame = -2
Query: 668 RNNEAVKKSRFKSKQRTQETFSRVSKLKAENQVLEEKVKTLSKQLQFLKD 519
+N EA K+ R K K+ + +RVS L+ +N+ L E++KTL K+L K+
Sbjct: 279 KNREAAKECRRKKKEYVKCLENRVSVLENQNKALIEELKTL-KELYCRKE 327
>AL032627-5|CAD45607.2| 314|Caenorhabditis elegans Hypothetical
protein Y41C4A.4c protein.
Length = 314
Score = 34.3 bits (75), Expect = 0.10
Identities = 20/50 (40%), Positives = 32/50 (64%)
Frame = -2
Query: 668 RNNEAVKKSRFKSKQRTQETFSRVSKLKAENQVLEEKVKTLSKQLQFLKD 519
+N EA K+ R K K+ + +RVS L+ +N+ L E++KTL K+L K+
Sbjct: 262 KNREAAKECRRKKKEYVKCLENRVSVLENQNKALIEELKTL-KELYCRKE 310
>AL032627-4|CAB54382.2| 327|Caenorhabditis elegans Hypothetical
protein Y41C4A.4b protein.
Length = 327
Score = 34.3 bits (75), Expect = 0.10
Identities = 20/50 (40%), Positives = 32/50 (64%)
Frame = -2
Query: 668 RNNEAVKKSRFKSKQRTQETFSRVSKLKAENQVLEEKVKTLSKQLQFLKD 519
+N EA K+ R K K+ + +RVS L+ +N+ L E++KTL K+L K+
Sbjct: 275 KNREAAKECRRKKKEYVKCLENRVSVLENQNKALIEELKTL-KELYCRKE 323
>AL032627-3|CAB54381.2| 325|Caenorhabditis elegans Hypothetical
protein Y41C4A.4a protein.
Length = 325
Score = 34.3 bits (75), Expect = 0.10
Identities = 20/50 (40%), Positives = 32/50 (64%)
Frame = -2
Query: 668 RNNEAVKKSRFKSKQRTQETFSRVSKLKAENQVLEEKVKTLSKQLQFLKD 519
+N EA K+ R K K+ + +RVS L+ +N+ L E++KTL K+L K+
Sbjct: 273 KNREAAKECRRKKKEYVKCLENRVSVLENQNKALIEELKTL-KELYCRKE 321
>AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform a protein.
Length = 1273
Score = 34.3 bits (75), Expect = 0.10
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = -2
Query: 671 NRNNEAVKKSRFKSKQRTQETFSRVSKLKAENQVLEEKVKTL-SKQLQFLKDLFFA-QAK 498
N NE KK+ + R E + K+K +N++LE+ + +L SK + L A Q
Sbjct: 166 NAVNEVEKKAEQELNDRLTELIAEKEKMKEQNEILEKNMDSLESKNKDIQRKLEIAKQTV 225
Query: 497 KDTTELEGIDLNKLFEDLPD 438
+ LE L+ +DL D
Sbjct: 226 EQKDGLENEQLSIAMKDLAD 245
>AC025723-7|AAN84833.1| 619|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform b protein.
Length = 619
Score = 34.3 bits (75), Expect = 0.10
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = -2
Query: 671 NRNNEAVKKSRFKSKQRTQETFSRVSKLKAENQVLEEKVKTL-SKQLQFLKDLFFA-QAK 498
N NE KK+ + R E + K+K +N++LE+ + +L SK + L A Q
Sbjct: 166 NAVNEVEKKAEQELNDRLTELIAEKEKMKEQNEILEKNMDSLESKNKDIQRKLEIAKQTV 225
Query: 497 KDTTELEGIDLNKLFEDLPD 438
+ LE L+ +DL D
Sbjct: 226 EQKDGLENEQLSIAMKDLAD 245
>AC025723-6|AAN84834.1| 621|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform c protein.
Length = 621
Score = 34.3 bits (75), Expect = 0.10
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = -2
Query: 671 NRNNEAVKKSRFKSKQRTQETFSRVSKLKAENQVLEEKVKTL-SKQLQFLKDLFFA-QAK 498
N NE KK+ + R E + K+K +N++LE+ + +L SK + L A Q
Sbjct: 166 NAVNEVEKKAEQELNDRLTELIAEKEKMKEQNEILEKNMDSLESKNKDIQRKLEIAKQTV 225
Query: 497 KDTTELEGIDLNKLFEDLPD 438
+ LE L+ +DL D
Sbjct: 226 EQKDGLENEQLSIAMKDLAD 245
>AB081596-1|BAC19843.1| 325|Caenorhabditis elegans cyclic
AMP-response element bindingprotein 1 gamma 2 protein.
Length = 325
Score = 34.3 bits (75), Expect = 0.10
Identities = 20/50 (40%), Positives = 32/50 (64%)
Frame = -2
Query: 668 RNNEAVKKSRFKSKQRTQETFSRVSKLKAENQVLEEKVKTLSKQLQFLKD 519
+N EA K+ R K K+ + +RVS L+ +N+ L E++KTL K+L K+
Sbjct: 273 KNREAAKECRRKKKEYVKCLENRVSVLENQNKALIEELKTL-KELYCRKE 321
>AB081595-1|BAC19842.1| 306|Caenorhabditis elegans cyclic
AMP-response element bindingprotein 1 beta protein.
Length = 306
Score = 34.3 bits (75), Expect = 0.10
Identities = 20/50 (40%), Positives = 32/50 (64%)
Frame = -2
Query: 668 RNNEAVKKSRFKSKQRTQETFSRVSKLKAENQVLEEKVKTLSKQLQFLKD 519
+N EA K+ R K K+ + +RVS L+ +N+ L E++KTL K+L K+
Sbjct: 254 KNREAAKECRRKKKEYVKCLENRVSVLENQNKALIEELKTL-KELYCRKE 302
>AF039713-13|AAB96719.2| 690|Caenorhabditis elegans Hypothetical
protein F57B10.1 protein.
Length = 690
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/50 (30%), Positives = 30/50 (60%)
Frame = -2
Query: 680 KRRNRNNEAVKKSRFKSKQRTQETFSRVSKLKAENQVLEEKVKTLSKQLQ 531
+R+ RN + + SR + + ++ RVS+ ENQ L+++++ LS + Q
Sbjct: 289 RRKIRNKRSAQTSRKRKQDYIEQLEDRVSESTKENQALKQQIERLSSENQ 338
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 32.7 bits (71), Expect = 0.31
Identities = 23/83 (27%), Positives = 38/83 (45%)
Frame = -2
Query: 665 NNEAVKKSRFKSKQRTQETFSRVSKLKAENQVLEEKVKTLSKQLQFLKDLFFAQAKKDTT 486
N A+ K R K TQE ++ K E + E+ K + K ++ K+ + K+ T
Sbjct: 2185 NMVALSKERRKENNETQEEEEQIQKRVEEFKESTEEQK-IQKSIELTKEECTSDEKELKT 2243
Query: 485 ELEGIDLNKLFEDLPDDRDTNDK 417
IDL+K+F + ND+
Sbjct: 2244 YSGSIDLDKVFIQGSSKKPRNDE 2266
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 32.7 bits (71), Expect = 0.31
Identities = 23/83 (27%), Positives = 38/83 (45%)
Frame = -2
Query: 665 NNEAVKKSRFKSKQRTQETFSRVSKLKAENQVLEEKVKTLSKQLQFLKDLFFAQAKKDTT 486
N A+ K R K TQE ++ K E + E+ K + K ++ K+ + K+ T
Sbjct: 2185 NMVALSKERRKENNETQEEEEQIQKRVEEFKESTEEQK-IQKSIELTKEECTSDEKELKT 2243
Query: 485 ELEGIDLNKLFEDLPDDRDTNDK 417
IDL+K+F + ND+
Sbjct: 2244 YSGSIDLDKVFIQGSSKKPRNDE 2266
>Z81107-9|CAB03234.2| 304|Caenorhabditis elegans Hypothetical
protein R07H5.10 protein.
Length = 304
Score = 31.9 bits (69), Expect = 0.55
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = -2
Query: 686 YXKRRNRNNEAVKKSRFKSKQRTQETFSRVSKLKAENQVLEEKVKTLSKQLQ 531
Y +R +NN AVK+ R K K + L N V ++K++ L+ +Q
Sbjct: 183 YSSKREKNNLAVKRCREKKKNEEKYKKEAFENLIRSNLVKDQKIEQLNNLVQ 234
>Z68335-4|CAA92732.2| 304|Caenorhabditis elegans Hypothetical
protein R07H5.10 protein.
Length = 304
Score = 31.9 bits (69), Expect = 0.55
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = -2
Query: 686 YXKRRNRNNEAVKKSRFKSKQRTQETFSRVSKLKAENQVLEEKVKTLSKQLQ 531
Y +R +NN AVK+ R K K + L N V ++K++ L+ +Q
Sbjct: 183 YSSKREKNNLAVKRCREKKKNEEKYKKEAFENLIRSNLVKDQKIEQLNNLVQ 234
>U58727-1|AAB00581.1| 358|Caenorhabditis elegans Hypothetical
protein D1005.3 protein.
Length = 358
Score = 31.5 bits (68), Expect = 0.73
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = -2
Query: 686 YXKRRNRNNEAVKKSRFKSKQRTQETFSRVSKLKAENQVLE 564
Y +R RNN+AV+KSR K+K+ + + K+K LE
Sbjct: 275 YKLKRARNNDAVRKSRKKAKELQDKKEAEHDKMKRRIAELE 315
>AF078789-3|AAK68487.1| 295|Caenorhabditis elegans Hypothetical
protein Y44E3B.1b protein.
Length = 295
Score = 31.1 bits (67), Expect = 0.96
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = -2
Query: 686 YXKRRNRNNEAVKKSRFKSKQRTQETFSRVSKLKAENQVLEEKVKT 549
Y +R RNN+AV+KSR K+K+ + ++K LE ++++
Sbjct: 231 YKLKRARNNDAVRKSRNKAKELQLQKDEEYDEMKKRITQLEAELQS 276
>AF078789-2|AAK21516.1| 318|Caenorhabditis elegans Hypothetical
protein Y44E3B.1a protein.
Length = 318
Score = 31.1 bits (67), Expect = 0.96
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = -2
Query: 686 YXKRRNRNNEAVKKSRFKSKQRTQETFSRVSKLKAENQVLEEKVKT 549
Y +R RNN+AV+KSR K+K+ + ++K LE ++++
Sbjct: 231 YKLKRARNNDAVRKSRNKAKELQLQKDEEYDEMKKRITQLEAELQS 276
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -2
Query: 668 RNNEAVKKSRFKSKQRTQETFSRVSKLKAENQVLEEKVKTLSKQL 534
R+N + FK+K E + + EN+ L ++VK L+ QL
Sbjct: 1485 RDNRQLSTDLFKAKTANDELAEYLDSTRRENKSLAQEVKDLTDQL 1529
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -2
Query: 668 RNNEAVKKSRFKSKQRTQETFSRVSKLKAENQVLEEKVKTLSKQL 534
R+N + FK+K E + + EN+ L ++VK L+ QL
Sbjct: 1485 RDNRQLSTDLFKAKTANDELAEYLDSTRRENKSLAQEVKDLTDQL 1529
>Z81557-7|CAB04538.1| 421|Caenorhabditis elegans Hypothetical
protein F59A1.13 protein.
Length = 421
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = -3
Query: 763 KTIFTICLLLKEGSVVLAMLMMRM 692
K F++C ++ +GSVV+ +L+M M
Sbjct: 286 KMRFSVCTIVSQGSVVIGLLLMAM 309
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -2
Query: 638 FKSKQRTQETFSRVSKLKAENQVLEEKVKTLSKQL 534
FK+K +E V L+ EN+ L +++K L+ QL
Sbjct: 1491 FKAKNAQEELAEVVEGLRRENKSLSQEIKDLTDQL 1525
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -2
Query: 638 FKSKQRTQETFSRVSKLKAENQVLEEKVKTLSKQL 534
FK+K +E V L+ EN+ L +++K L+ QL
Sbjct: 1491 FKAKNAQEELAEVVEGLRRENKSLSQEIKDLTDQL 1525
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -2
Query: 638 FKSKQRTQETFSRVSKLKAENQVLEEKVKTLSKQL 534
FK+K +E V L+ EN+ L +++K L+ QL
Sbjct: 1494 FKAKNAQEELAEVVEGLRRENKSLSQEIKDLTDQL 1528
>AL117203-12|CAB60423.1| 487|Caenorhabditis elegans Hypothetical
protein Y48C3A.20 protein.
Length = 487
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = -2
Query: 677 RRNRNNEAVKKSRFKSKQRTQETFSRVSKLKAENQVLEEKVKTLSKQLQFLKD 519
+R R N + SKQ+ Q+ R+++ A+ + + + + QLQF +D
Sbjct: 157 KRGRYNNNQEAPSSVSKQQLQQVTGRINEQIAKKYIFKSPTRKCTFQLQFERD 209
>AC006835-1|AAF40015.2| 903|Caenorhabditis elegans Hypothetical
protein ZK993.2 protein.
Length = 903
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -2
Query: 662 NEAVKKSRFKSKQRTQETFSRVSKLKAE 579
+E +KKS +SK+ ++ SRV KLKAE
Sbjct: 681 SEQLKKSYEESKKPRRDLISRVRKLKAE 708
>Z74033-5|CAF31473.1| 333|Caenorhabditis elegans Hypothetical
protein F38B7.7 protein.
Length = 333
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = +2
Query: 227 ITLCRLFYIEEIYDMSCFTVSLILTYKASVDFTKSNLLCVVTKSENSRT*LSVCIISLTL 406
+T+ L ++ I+ + C + + + + + T NL+CV N L+ I L L
Sbjct: 18 LTVSFLLFVIGIFGIVCNSSIVYIFFNEKSERTSFNLICVYRSLSNIYI-LATTFIGLFL 76
Query: 407 LNTIYHLCPY 436
TI PY
Sbjct: 77 PKTIIGCSPY 86
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = -2
Query: 635 KSKQRTQETFSRVSKLKAENQVLEEKVKTLSKQLQFLKDLFFAQAKKDTTELEGIDLNK 459
+S T + +++ ++E Q+L EK+K L L+ L D K DT +L DL K
Sbjct: 1815 ESDSDTNKYQLQIASFESERQILTEKIKELDGALR-LSDSKVQDMKDDTDKLRR-DLTK 1871
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = -2
Query: 635 KSKQRTQETFSRVSKLKAENQVLEEKVKTLSKQLQFLKDLFFAQAKKDTTELEGIDLNK 459
+S T + +++ ++E Q+L EK+K L L+ L D K DT +L DL K
Sbjct: 1888 ESDSDTNKYQLQIASFESERQILTEKIKELDGALR-LSDSKVQDMKDDTDKLRR-DLTK 1944
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = -2
Query: 635 KSKQRTQETFSRVSKLKAENQVLEEKVKTLSKQLQFLKDLFFAQAKKDTTELEGIDLNK 459
+S T + +++ ++E Q+L EK+K L L+ L D K DT +L DL K
Sbjct: 1888 ESDSDTNKYQLQIASFESERQILTEKIKELDGALR-LSDSKVQDMKDDTDKLRR-DLTK 1944
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,654,520
Number of Sequences: 27780
Number of extensions: 235989
Number of successful extensions: 854
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 854
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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