Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_O06
(588 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC096321-1|AAH96321.1| 797|Homo sapiens solute carrier family 6... 32 1.7
BC096320-1|AAH96320.1| 797|Homo sapiens solute carrier family 6... 32 1.7
BC096319-1|AAH96319.1| 797|Homo sapiens solute carrier family 6... 32 1.7
AF352733-1|AAK29670.1| 797|Homo sapiens glycine type 2 transpor... 32 1.7
AF142501-1|AAD27892.1| 797|Homo sapiens glycine transporter typ... 32 1.7
AF117999-1|AAK12641.1| 797|Homo sapiens sodium- and chloride-de... 32 1.7
AF085412-1|AAC95145.1| 797|Homo sapiens glycine transporter GLY... 32 1.7
>BC096321-1|AAH96321.1| 797|Homo sapiens solute carrier family 6
(neurotransmitter transporter, glycine), member 5
protein.
Length = 797
Score = 31.9 bits (69), Expect = 1.7
Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Frame = +2
Query: 218 EYLVQPPKHYFLKTFMVILLELTLSMDRILSRASSKIAGV*FDFTPYLRT-PGLITFAFC 394
E L + P F ++L LTL +D + + + + + +F YLRT + T C
Sbjct: 552 EALTRLPLSPFWAIIFFLML-LTLGLDTMFATIETIVTSISDEFPKYLRTHKPVFTLGCC 610
Query: 395 VAFY*PFLYLIQISATHTFFLLITVNRKGAKVLKTYSQLIG 517
+ F+ +I + F L+ T A V+ +L+G
Sbjct: 611 ICFFIMGFPMITQGGIYMFQLVDTYAASYALVIIAIFELVG 651
>BC096320-1|AAH96320.1| 797|Homo sapiens solute carrier family 6
(neurotransmitter transporter, glycine), member 5
protein.
Length = 797
Score = 31.9 bits (69), Expect = 1.7
Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Frame = +2
Query: 218 EYLVQPPKHYFLKTFMVILLELTLSMDRILSRASSKIAGV*FDFTPYLRT-PGLITFAFC 394
E L + P F ++L LTL +D + + + + + +F YLRT + T C
Sbjct: 552 EALTRLPLSPFWAIIFFLML-LTLGLDTMFATIETIVTSISDEFPKYLRTHKPVFTLGCC 610
Query: 395 VAFY*PFLYLIQISATHTFFLLITVNRKGAKVLKTYSQLIG 517
+ F+ +I + F L+ T A V+ +L+G
Sbjct: 611 ICFFIMGFPMITQGGIYMFQLVDTYAASYALVIIAIFELVG 651
>BC096319-1|AAH96319.1| 797|Homo sapiens solute carrier family 6
(neurotransmitter transporter, glycine), member 5
protein.
Length = 797
Score = 31.9 bits (69), Expect = 1.7
Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Frame = +2
Query: 218 EYLVQPPKHYFLKTFMVILLELTLSMDRILSRASSKIAGV*FDFTPYLRT-PGLITFAFC 394
E L + P F ++L LTL +D + + + + + +F YLRT + T C
Sbjct: 552 EALTRLPLSPFWAIIFFLML-LTLGLDTMFATIETIVTSISDEFPKYLRTHKPVFTLGCC 610
Query: 395 VAFY*PFLYLIQISATHTFFLLITVNRKGAKVLKTYSQLIG 517
+ F+ +I + F L+ T A V+ +L+G
Sbjct: 611 ICFFIMGFPMITQGGIYMFQLVDTYAASYALVIIAIFELVG 651
>AF352733-1|AAK29670.1| 797|Homo sapiens glycine type 2 transporter
variant SC6 protein.
Length = 797
Score = 31.9 bits (69), Expect = 1.7
Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Frame = +2
Query: 218 EYLVQPPKHYFLKTFMVILLELTLSMDRILSRASSKIAGV*FDFTPYLRT-PGLITFAFC 394
E L + P F ++L LTL +D + + + + + +F YLRT + T C
Sbjct: 552 EALTRLPLSPFWAIIFFLML-LTLGLDTMFATIETIVTSISDEFPKYLRTHKPVFTLGCC 610
Query: 395 VAFY*PFLYLIQISATHTFFLLITVNRKGAKVLKTYSQLIG 517
+ F+ +I + F L+ T A V+ +L+G
Sbjct: 611 ICFFIMGFPMITQGGIYMFQLVDTYAASYALVIIAIFELVG 651
>AF142501-1|AAD27892.1| 797|Homo sapiens glycine transporter type-2
protein.
Length = 797
Score = 31.9 bits (69), Expect = 1.7
Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Frame = +2
Query: 218 EYLVQPPKHYFLKTFMVILLELTLSMDRILSRASSKIAGV*FDFTPYLRT-PGLITFAFC 394
E L + P F ++L LTL +D + + + + + +F YLRT + T C
Sbjct: 552 EALTRLPLSPFWAIIFFLML-LTLGLDTMFASIETIVTSISDEFPKYLRTHKPVFTLGCC 610
Query: 395 VAFY*PFLYLIQISATHTFFLLITVNRKGAKVLKTYSQLIG 517
+ F+ +I + F L+ T A V+ +L+G
Sbjct: 611 ICFFIMGFPMITQGGIYMFQLVDTYAASYALVIIAIFELVG 651
>AF117999-1|AAK12641.1| 797|Homo sapiens sodium- and
chloride-dependent glycine transporter type II protein.
Length = 797
Score = 31.9 bits (69), Expect = 1.7
Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Frame = +2
Query: 218 EYLVQPPKHYFLKTFMVILLELTLSMDRILSRASSKIAGV*FDFTPYLRT-PGLITFAFC 394
E L + P F ++L LTL +D + + + + + +F YLRT + T C
Sbjct: 552 EALTRLPLSPFWAIIFFLML-LTLGLDTMFATIETIVTSISDEFPKYLRTHKPVFTLGCC 610
Query: 395 VAFY*PFLYLIQISATHTFFLLITVNRKGAKVLKTYSQLIG 517
+ F+ +I + F L+ T A V+ +L+G
Sbjct: 611 ICFFIMGFPMITQGGIYMFQLVDTYAASYALVIIAIFELVG 651
>AF085412-1|AAC95145.1| 797|Homo sapiens glycine transporter GLYT2
protein.
Length = 797
Score = 31.9 bits (69), Expect = 1.7
Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Frame = +2
Query: 218 EYLVQPPKHYFLKTFMVILLELTLSMDRILSRASSKIAGV*FDFTPYLRT-PGLITFAFC 394
E L + P F ++L LTL +D + + + + + +F YLRT + T C
Sbjct: 552 EALTRLPLSPFWAIIFFLML-LTLGLDTMFATIETIVTSISDEFPKYLRTHKPVFTLGCC 610
Query: 395 VAFY*PFLYLIQISATHTFFLLITVNRKGAKVLKTYSQLIG 517
+ F+ +I + F L+ T A V+ +L+G
Sbjct: 611 ICFFIMGFPMITQGGIYMFQLVDTYAASYALVIIAIFELVG 651
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,844,767
Number of Sequences: 237096
Number of extensions: 1507211
Number of successful extensions: 1871
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1871
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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