Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_O05
         (718 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    25   3.1  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    24   4.1  
U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          23   9.5  
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          23   9.5  
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          23   9.5  
AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          23   9.5  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          23   9.5  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          23   9.5  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          23   9.5  

>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 19/65 (29%), Positives = 31/65 (47%)
 Frame = +3

Query: 333 KLGRVIAEIVFVGVIDKRSPARRRRICS*VLKFVGIPYGVSQ*LILGCRSFFGFFSLPQL 512
           +L ++   I+ +    +  P   ++I   +LK   IP+ V   LI  C  F  F  LP +
Sbjct: 233 ELRKLALVIILIRAGLEMDPTAFKKIYKTILKLGLIPWFVECSLIAVCARF--FLQLPWM 290

Query: 513 FLILL 527
           + ILL
Sbjct: 291 WSILL 295


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 192 HGPQRRT*QRPSGSRYPGCQS 254
           H PQR T + P+G ++  C S
Sbjct: 285 HRPQRSTRKNPAGRQHDRCDS 305


>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 16/50 (32%), Positives = 20/50 (40%)
 Frame = +1

Query: 76  PRLHIRQSFKLSEACLVEGGDSPGLFCLTAVKTADLVANTVLSAGHSRDP 225
           P    + SF   EAC +       +         DL ANTVLS G +  P
Sbjct: 259 PEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 308


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 16/50 (32%), Positives = 20/50 (40%)
 Frame = +1

Query: 76  PRLHIRQSFKLSEACLVEGGDSPGLFCLTAVKTADLVANTVLSAGHSRDP 225
           P    + SF   EAC +       +         DL ANTVLS G +  P
Sbjct: 259 PEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 308


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 16/50 (32%), Positives = 20/50 (40%)
 Frame = +1

Query: 76  PRLHIRQSFKLSEACLVEGGDSPGLFCLTAVKTADLVANTVLSAGHSRDP 225
           P    + SF   EAC +       +         DL ANTVLS G +  P
Sbjct: 259 PEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 308


>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +1

Query: 553 TSWAGGRGGASLATSRGGTAGAAVLAVPLTC 645
           TS  GG GG   ++  GG+     L   L C
Sbjct: 248 TSNTGGTGGTGTSSGGGGSFQPPTLTEELLC 278


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +1

Query: 553 TSWAGGRGGASLATSRGGTAGAAVLAVPLTC 645
           TS  GG GG   ++  GG+     L   L C
Sbjct: 248 TSNTGGTGGTGTSSGGGGSFQPPTLTEELLC 278


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +1

Query: 553 TSWAGGRGGASLATSRGGTAGAAVLAVPLTC 645
           TS  GG GG   ++  GG+     L   L C
Sbjct: 248 TSNTGGTGGTGTSSGGGGSFQPPTLTEELLC 278


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +1

Query: 553 TSWAGGRGGASLATSRGGTAGAAVLAVPLTC 645
           TS  GG GG   ++  GG+     L   L C
Sbjct: 248 TSNTGGTGGTGTSSGGGGSFQPPTLTEELLC 278


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,516
Number of Sequences: 2352
Number of extensions: 11811
Number of successful extensions: 27
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)