Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_O05
         (718 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY374297-1|AAQ82435.1| 1049|Homo sapiens megakaryoblastic leukem...    34   0.58 
AB033069-1|BAA86557.2|  828|Homo sapiens KIAA1243 protein protein.     34   0.58 
BC006460-1|AAH06460.1|  359|Homo sapiens hexamethylene bis-aceta...    31   3.1  
AB021179-1|BAA36166.1|  359|Homo sapiens HEXIM1 protein protein.       31   3.1  
AK124560-1|BAC85885.1|  145|Homo sapiens protein ( Homo sapiens ...    31   4.1  

>AY374297-1|AAQ82435.1| 1049|Homo sapiens megakaryoblastic leukemia 2
            protein.
          Length = 1049

 Score = 33.9 bits (74), Expect = 0.58
 Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = +2

Query: 83   CISASLSNCP-KHVWWREVTVLVSSASRLLKLPT*SPTRSSAQDIAETQRLPLPW 244
            C+S  LS+    ++ W ++T + +S+S L  L T +P+  SA D  + Q LPLPW
Sbjct: 996  CLSLDLSDSNLDNMEWLDIT-MPNSSSGLTPLSTTAPSMFSA-DFLDPQDLPLPW 1048


>AB033069-1|BAA86557.2|  828|Homo sapiens KIAA1243 protein protein.
          Length = 828

 Score = 33.9 bits (74), Expect = 0.58
 Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = +2

Query: 83  CISASLSNCP-KHVWWREVTVLVSSASRLLKLPT*SPTRSSAQDIAETQRLPLPW 244
           C+S  LS+    ++ W ++T + +S+S L  L T +P+  SA D  + Q LPLPW
Sbjct: 775 CLSLDLSDSNLDNMEWLDIT-MPNSSSGLTPLSTTAPSMFSA-DFLDPQDLPLPW 827


>BC006460-1|AAH06460.1|  359|Homo sapiens hexamethylene
           bis-acetamide inducible 1 protein.
          Length = 359

 Score = 31.5 bits (68), Expect = 3.1
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 313 KKYARRSREFKKHWPPVVKLLWQ 245
           KK+ RR  + K+HW P  KL W+
Sbjct: 151 KKHRRRPSKKKRHWKPYYKLTWE 173


>AB021179-1|BAA36166.1|  359|Homo sapiens HEXIM1 protein protein.
          Length = 359

 Score = 31.5 bits (68), Expect = 3.1
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 313 KKYARRSREFKKHWPPVVKLLWQ 245
           KK+ RR  + K+HW P  KL W+
Sbjct: 151 KKHRRRPSKKKRHWKPYYKLTWE 173


>AK124560-1|BAC85885.1|  145|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42569 fis, clone BRACE3007642. ).
          Length = 145

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 19/53 (35%), Positives = 23/53 (43%)
 Frame = +1

Query: 40  RKGRLMAWGLGRPRLHIRQSFKLSEACLVEGGDSPGLFCLTAVKTADLVANTV 198
           R+GR + WGLG P  H+R    LS  C+          C  AV    LV   V
Sbjct: 89  RQGRGVTWGLGLPSYHLRT--LLSPVCVPARDQRAPRKCCEAVLACPLVETLV 139


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,374,731
Number of Sequences: 237096
Number of extensions: 2115176
Number of successful extensions: 5628
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5625
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)