Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_O02
         (688 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40061-1|AAA81148.2|  573|Caenorhabditis elegans Hypothetical pr...    31   0.77 
AL023813-1|CAA19425.2|  188|Caenorhabditis elegans Hypothetical ...    28   5.4  
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ...    28   5.4  
Z82078-3|CAB04942.1|  313|Caenorhabditis elegans Hypothetical pr...    28   7.2  

>U40061-1|AAA81148.2|  573|Caenorhabditis elegans Hypothetical
           protein ZK563.2 protein.
          Length = 573

 Score = 31.1 bits (67), Expect = 0.77
 Identities = 19/66 (28%), Positives = 35/66 (53%)
 Frame = -1

Query: 604 TSVMFNN*GYIKFFQIYYCLVI*FKCIEENVSVTV*NLINLNFREALGDCTLQIVVDVSM 425
           TS+   N G+I  F   +CLV+  K ++ + +  V NL++         CT  +V+ V +
Sbjct: 285 TSLSDKNIGWIVLFVSIFCLVMCLKLLDGHAANYVRNLLSKQCPGMWKPCTGYLVMLVGL 344

Query: 424 VESCAI 407
           ++S +I
Sbjct: 345 IQSNSI 350


>AL023813-1|CAA19425.2|  188|Caenorhabditis elegans Hypothetical
           protein H02K04.1 protein.
          Length = 188

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +3

Query: 342 FYLELFIFLGVNCTVPMV*AQQMAQDSTIETSTT 443
           +YL L +FL VN  +PMV  ++    +T  T+TT
Sbjct: 6   YYLFL-VFLNVNACIPMVPPEEPTTTTTTATTTT 38


>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
           protein F54G2.2 protein.
          Length = 1023

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 15/63 (23%), Positives = 35/63 (55%)
 Frame = +2

Query: 488 YQVLNCYTNILFNTLELYNKTIIYLKKFNVSLIIKHYTGSDQLAKNTPSLSCTASV*MSH 667
           +Q+ +C  +I F+  +++ +T+I  +     + I+   G + +A +  ++SC  S  +S 
Sbjct: 738 FQMGSCLRSITFHVADVWRETVILGRNEYGKMGIQLCIGDEPVATDVSNISCQKSF-LSS 796

Query: 668 NDI 676
           +DI
Sbjct: 797 SDI 799


>Z82078-3|CAB04942.1|  313|Caenorhabditis elegans Hypothetical
           protein W09D6.2 protein.
          Length = 313

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -2

Query: 132 DLSF*LYFFIYIVQIKENIVYFYLSINNNRHVQ 34
           DL F  +F I I  +  + VY +LS+ NN HV+
Sbjct: 90  DLLFVGFFGISIAILALHFVYRFLSMTNNHHVK 122


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,103,459
Number of Sequences: 27780
Number of extensions: 273721
Number of successful extensions: 598
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 598
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)