Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_N23
         (752 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77661-1|CAB01186.1|  341|Caenorhabditis elegans Hypothetical pr...    32   0.50 
AL023844-1|CAA19526.1|  401|Caenorhabditis elegans Hypothetical ...    28   6.2  
Z81029-2|CAB02696.1|  220|Caenorhabditis elegans Hypothetical pr...    28   8.2  

>Z77661-1|CAB01186.1|  341|Caenorhabditis elegans Hypothetical
           protein F40G12.1 protein.
          Length = 341

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
 Frame = -3

Query: 504 YTYMYIKIFYLQSI-FNTLFT-SNVFNLYLCFMFV*CTFYYGNI--QKSNLLHNMLIIIR 337
           + Y++    +++S+ FN  F   N    Y C M   C   Y  +    +N LHN +++  
Sbjct: 47  FLYLFYLFIFIRSMHFNLTFLFMNYGGQYFCSMLSRCIIVYQQLGNDPNNDLHNWILVAN 106

Query: 336 FLSNIC 319
           F   +C
Sbjct: 107 FARTVC 112


>AL023844-1|CAA19526.1|  401|Caenorhabditis elegans Hypothetical
           protein Y48A6B.1 protein.
          Length = 401

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -1

Query: 464 YLILYLQAMFLICIFALCLYNVHFTMATYKKVTYYTI 354
           Y +L+      +C F + L ++HF + T K +  Y I
Sbjct: 30  YTVLHRYLCLFVCFFGVLLNSLHFYVLTRKAMRVYII 66


>Z81029-2|CAB02696.1|  220|Caenorhabditis elegans Hypothetical
           protein C01A2.2 protein.
          Length = 220

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -1

Query: 485 KYFIYSPYLILYLQAMFLICIFALCLYNVHFTMATYKKV 369
           K   +SP+L+ Y+    L CIF +      F M  +++V
Sbjct: 126 KKVFFSPFLVFYMTNFILNCIFTILTLGA-FAMDVHRRV 163


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,132,331
Number of Sequences: 27780
Number of extensions: 306496
Number of successful extensions: 594
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 594
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)