Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_N15
         (789 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               22   7.5  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   7.5  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    21   9.9  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    21   9.9  

>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 780 INADDIKLLLEDE 742
           +N DDI  LLEDE
Sbjct: 33  LNLDDIDSLLEDE 45


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 365 YEVNIFKTIIGTLAFRT 415
           +EVNI K+I+G L   T
Sbjct: 128 WEVNILKSIVGQLQVDT 144


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +3

Query: 540 ISCSFVTILKRYMKISL*TYNIRNVINIIALQSCSFCF 653
           I C FV I K    +S    N+ NVI     Q+ +F F
Sbjct: 57  IDC-FVRIPKEQGFLSYWRGNLANVIRYFPTQALNFAF 93


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +3

Query: 540 ISCSFVTILKRYMKISL*TYNIRNVINIIALQSCSFCF 653
           I C FV I K    +S    N+ NVI     Q+ +F F
Sbjct: 57  IDC-FVRIPKEQGFLSYWRGNLANVIRYFPTQALNFAF 93


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,681
Number of Sequences: 438
Number of extensions: 3189
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)