Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_N12
         (530 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66515-10|CAI70410.1|  510|Caenorhabditis elegans Hypothetical p...    28   4.8  
Z66515-9|CAA91346.1|  519|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z99280-6|CAB16502.1|  418|Caenorhabditis elegans Hypothetical pr...    27   6.3  
Z82284-9|CAB05295.1|  418|Caenorhabditis elegans Hypothetical pr...    27   6.3  
Z74035-3|CAA98481.1|  808|Caenorhabditis elegans Hypothetical pr...    27   6.3  
U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of ...    27   8.4  
AC084154-4|AAK29868.1|  767|Caenorhabditis elegans Hypothetical ...    27   8.4  

>Z66515-10|CAI70410.1|  510|Caenorhabditis elegans Hypothetical
           protein R53.1b protein.
          Length = 510

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -2

Query: 220 PDAKELKEHIREALETECAKCTEAQKKGTRRVI-GHLINNESESWNELTAKY 68
           P+ K      +  +ETE ++  EA     R ++ GH++  +S +W ++  K+
Sbjct: 231 PELKNKFFKTKLTIETESSETMEAVVTSLRELLAGHIVYYDSHAWLDIVTKW 282


>Z66515-9|CAA91346.1|  519|Caenorhabditis elegans Hypothetical
           protein R53.1a protein.
          Length = 519

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -2

Query: 220 PDAKELKEHIREALETECAKCTEAQKKGTRRVI-GHLINNESESWNELTAKY 68
           P+ K      +  +ETE ++  EA     R ++ GH++  +S +W ++  K+
Sbjct: 240 PELKNKFFKTKLTIETESSETMEAVVTSLRELLAGHIVYYDSHAWLDIVTKW 291


>Z99280-6|CAB16502.1|  418|Caenorhabditis elegans Hypothetical
           protein Y57G11B.1 protein.
          Length = 418

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 22/68 (32%), Positives = 34/68 (50%)
 Frame = -2

Query: 211 KELKEHIREALETECAKCTEAQKKGTRRVIGHLINNESESWNELTAKYDPENKFTAKYEK 32
           KELKE  RE  +   AK    ++      I  LIN+ +E+  EL  K+D +    A Y++
Sbjct: 58  KELKE-AREESDDALAK----RQATADSQISELINSNNEAIRELQKKFDED---AAAYDR 109

Query: 31  EXRESKAE 8
             +E+  E
Sbjct: 110 SIKETTRE 117


>Z82284-9|CAB05295.1|  418|Caenorhabditis elegans Hypothetical
           protein Y57G11B.1 protein.
          Length = 418

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 22/68 (32%), Positives = 34/68 (50%)
 Frame = -2

Query: 211 KELKEHIREALETECAKCTEAQKKGTRRVIGHLINNESESWNELTAKYDPENKFTAKYEK 32
           KELKE  RE  +   AK    ++      I  LIN+ +E+  EL  K+D +    A Y++
Sbjct: 58  KELKE-AREESDDALAK----RQATADSQISELINSNNEAIRELQKKFDED---AAAYDR 109

Query: 31  EXRESKAE 8
             +E+  E
Sbjct: 110 SIKETTRE 117


>Z74035-3|CAA98481.1|  808|Caenorhabditis elegans Hypothetical
           protein F47G9.4 protein.
          Length = 808

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 16/73 (21%), Positives = 32/73 (43%)
 Frame = -2

Query: 289 EVLSNSRLLQPYIKCILDTDRCAPDAKELKEHIREALETECAKCTEAQKKGTRRVIGHLI 110
           ++L+ ++ L PY+ CIL+ +    D K         +E+ C + T  +     R++    
Sbjct: 464 QILTAAKQLVPYVSCILNMNAMI-DPKRCHPPDPAPMESICLEITGIEPNSQNRILAIEK 522

Query: 109 NNESESWNELTAK 71
             E+   N+   K
Sbjct: 523 EEENRRLNQEAKK 535


>U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of
            potassium channelsprotein 2 protein.
          Length = 1564

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 10/42 (23%), Positives = 22/42 (52%)
 Frame = -2

Query: 250  KCILDTDRCAPDAKELKEHIREALETECAKCTEAQKKGTRRV 125
            KC  +  +CA + +++ +   + ++  C KC +  KK  + V
Sbjct: 1273 KCAKNVQKCAKNVQKMCKKCAKNVQKMCKKCAKMCKKCAKNV 1314


>AC084154-4|AAK29868.1|  767|Caenorhabditis elegans Hypothetical
           protein Y22D7AR.7 protein.
          Length = 767

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -2

Query: 148 QKKGTRRVIGHLINNESESWNELTAKYDPEN 56
           Q++ T  V+   +N E  +WN +  KY PE+
Sbjct: 544 QERVTHIVMLGQVNEEDANWNRMFCKYFPES 574


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,947,980
Number of Sequences: 27780
Number of extensions: 216663
Number of successful extensions: 604
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1049512662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)