Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_N07
         (769 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1431 + 27057706-27057900,27058701-27058815,27059123-270591...    46   4e-05
02_01_0599 - 4455151-4455915,4455999-4456098,4456176-4456222,445...    33   0.33 
05_01_0502 + 4191443-4191769,4191770-4191892,4194161-4194313,419...    29   4.1  
02_03_0072 + 14761373-14761599,14761672-14761773,14762281-14762452     29   5.4  
05_03_0146 + 8883761-8883860,8886000-8886086,8886574-8886684,888...    28   9.4  

>08_02_1431 +
           27057706-27057900,27058701-27058815,27059123-27059170,
           27059272-27059524,27059689-27059776,27059883-27059948,
           27060335-27060403,27060492-27060597,27060639-27060793,
           27061208-27061537
          Length = 474

 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = -1

Query: 658 FDITFCFSVSMWIHLNNGDNGLREFLEHIKTISKS---IIIEPQPWKCYRQ 515
           +D   C SV+ WIHLN GD+G+      I  + +     I+EPQPW  YR+
Sbjct: 199 YDTIVCLSVTKWIHLNWGDDGIITLFVKIWRLLRPGGVFIMEPQPWTSYRR 249


>02_01_0599 -
           4455151-4455915,4455999-4456098,4456176-4456222,
           4456566-4456612,4457299-4457461,4458013-4458042
          Length = 383

 Score = 32.7 bits (71), Expect = 0.33
 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
 Frame = -1

Query: 619 HLNNGDNGLREFLEHIKTISKSIIIEPQPWKCYRQAQKRIKKTGNTFQLYDNLKI---RS 449
           H  + ++ L E   HI+ +++ II+E + WK ++    R K     F L++ LKI   R 
Sbjct: 305 HAPSVEHSLAEVAAHIEAVTEKIIMEEEKWKKWKTENIRRKHNYVPF-LFNFLKILEERQ 363

Query: 448 QVDIFIESILKEHTH 404
           Q+   IE   K+ +H
Sbjct: 364 QLKPLIEK-AKQKSH 377


>05_01_0502 +
           4191443-4191769,4191770-4191892,4194161-4194313,
           4194420-4194505,4194648-4194732,4194871-4194990,
           4195066-4195134,4195351-4195506
          Length = 372

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 8/30 (26%), Positives = 20/30 (66%)
 Frame = +1

Query: 322 FFHLFEYLICNFVFFCSMKNFVIHILLYVY 411
           +F++F  L+C ++FF    NF++ + ++ +
Sbjct: 64  YFNIFNKLVCTYIFFPQFVNFLLLLDMFFF 93


>02_03_0072 + 14761373-14761599,14761672-14761773,14762281-14762452
          Length = 166

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +3

Query: 18  VKLIH*LHCHXYAKIFISTIADLQVTLNMLNAPEPEMEVES 140
           +K+IH  H H YAK+    IA +  T++ML+    ++ + +
Sbjct: 117 IKIIH-PHMHTYAKLLHWKIASISSTISMLSLSTNKLSIHA 156


>05_03_0146 +
           8883761-8883860,8886000-8886086,8886574-8886684,
           8887021-8887121,8887208-8887258,8887347-8887496,
           8887577-8887639,8887728-8887814,8887908-8888018,
           8888097-8888387,8889372-8889815
          Length = 531

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 15/62 (24%), Positives = 33/62 (53%)
 Frame = -1

Query: 511 QKRIKKTGNTFQLYDNLKIRSQVDIFIESILKEHTHIKVYESQNSSWNRKIQSYKLNIQT 332
           Q++I  T   +Q +D +   + +  + E    E    ++YES+N+ + R++    + +Q+
Sbjct: 173 QQQISTTERIYQEFDAIYNNNNMTTWSERS-SERDIKELYESKNNHFKRQVNGTTMAMQS 231

Query: 331 NE 326
           NE
Sbjct: 232 NE 233


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,984,248
Number of Sequences: 37544
Number of extensions: 310070
Number of successful extensions: 712
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)