BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_N07
(769 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein p... 26 1.1
DQ396551-1|ABD60146.1| 354|Anopheles gambiae adipokinetic hormo... 25 2.6
AY298745-1|AAQ63187.1| 354|Anopheles gambiae G-protein coupled ... 25 2.6
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 24 4.5
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 24 5.9
>AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein
protein.
Length = 400
Score = 26.2 bits (55), Expect = 1.1
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Frame = -1
Query: 595 LREFLEHIK-TISKSIIIEPQ--PWKCYRQAQ-KRIKKTGNTFQLYDNLK-IRSQVDIFI 431
+ EF+ +K + K+ E P K +AQ +R K N ++ D + +Q+ F+
Sbjct: 21 IEEFISKLKKSYKKASKAEENEAPRKVSHKAQLERFKNYANNLEIEDLRDGMIAQMIEFM 80
Query: 430 ESILKEHTHIKVYESQNSSWNRKIQS 353
ES++KE + +K Q S+ ++Q+
Sbjct: 81 ESMIKEMSELKKQLKQKSTQEIEVQT 106
>DQ396551-1|ABD60146.1| 354|Anopheles gambiae adipokinetic hormone
receptor protein.
Length = 354
Score = 25.0 bits (52), Expect = 2.6
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
Frame = +1
Query: 325 FHLFE----YLICNFVFFCSMKNFVIHILLYVYALLKY 426
+H FE +I N + C M F + ++LY Y + Y
Sbjct: 200 YHYFEEEIYQIIYNVLVMCLMYTFPLIVILYCYGSIYY 237
>AY298745-1|AAQ63187.1| 354|Anopheles gambiae G-protein coupled
receptor protein.
Length = 354
Score = 25.0 bits (52), Expect = 2.6
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
Frame = +1
Query: 325 FHLFE----YLICNFVFFCSMKNFVIHILLYVYALLKY 426
+H FE +I N + C M F + ++LY Y + Y
Sbjct: 200 YHYFEEEIYQIIYNVLVMCLMYTFPLIVILYCYGSIYY 237
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
TPR-containing phosphoprotein protein.
Length = 1200
Score = 24.2 bits (50), Expect = 4.5
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -1
Query: 502 IKKTGNTFQLYDNLKIRSQVDIFIESILKEH 410
+ T N +LY+ + + + D + ILKEH
Sbjct: 496 VSMTYNLARLYEAMAVFDKADKLYKDILKEH 526
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 23.8 bits (49), Expect = 5.9
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 372 HEEFCDSYTFICVC 413
H E CDS T C+C
Sbjct: 732 HAEICDSETGRCIC 745
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 733,784
Number of Sequences: 2352
Number of extensions: 14010
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -