Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_N07
         (769 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC053560-1|AAH53560.1|  292|Homo sapiens BCDIN3 domain containin...   108   2e-23
BC018935-1|AAH18935.2|  689|Homo sapiens bin3, bicoid-interactin...    50   7e-06
BC016396-1|AAH16396.1|  220|Homo sapiens BCDIN3 protein protein.       50   7e-06
BC000556-1|AAH00556.2|  689|Homo sapiens bin3, bicoid-interactin...    50   7e-06
AK000264-1|BAA91040.1|  220|Homo sapiens protein ( Homo sapiens ...    50   7e-06
AF264752-1|AAF74767.1|  220|Homo sapiens unknown protein.              50   7e-06

>BC053560-1|AAH53560.1|  292|Homo sapiens BCDIN3 domain containing
           protein.
          Length = 292

 Score =  108 bits (260), Expect = 2e-23
 Identities = 49/118 (41%), Positives = 79/118 (66%), Gaps = 2/118 (1%)
 Frame = -1

Query: 694 INEYLKKNGRSMFDITFCFSVSMWIHLNNGDNGLREFLEHIKTISKSIIIEPQPWKCYRQ 515
           ++ +L + GRS+FDI FC S++MWIHLN+GD+GL EFL H+ ++   +++EPQPWKCYR 
Sbjct: 146 LSSFLSQFGRSVFDIGFCMSITMWIHLNHGDHGLWEFLAHLSSLCHYLLVEPQPWKCYRA 205

Query: 514 AQKRIKKTG-NTFQLYDNLKIRSQVDIFIESIL-KEHTHIKVYESQNSSWNRKIQSYK 347
           A +R++K G + F  + +L IR  +   I  IL ++H    +    N+SW+R +  ++
Sbjct: 206 AARRLRKLGLHDFDHFHSLAIRGDMPNQIVQILTQDHGMELICCFGNTSWDRSLLLFR 263


>BC018935-1|AAH18935.2|  689|Homo sapiens bin3, bicoid-interacting
           3, homolog (Drosophila) protein.
          Length = 689

 Score = 50.4 bits (115), Expect = 7e-06
 Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
 Frame = -1

Query: 745 NIEYTTANVMAKSDRDSINEYLKKNGRSMFDITFCFSVSMWIHLNNGDNGLREFLEHIKT 566
           N+ + T N +   DRD + E         +D+  C S++ W+HLN GD GL+     I  
Sbjct: 552 NVVFVTGNYVL--DRDDLVEAQTPE----YDVVLCLSLTKWVHLNWGDEGLKRMFRRIYR 605

Query: 565 ISKS---IIIEPQPWKCYRQAQKRIKKTGNTFQLYDNLKIRSQ 446
             +    +++EPQPW  Y    KR   T   ++ Y  ++++ +
Sbjct: 606 HLRPGGILVLEPQPWSSY---GKRKTLTETIYKNYYRIQLKPE 645


>BC016396-1|AAH16396.1|  220|Homo sapiens BCDIN3 protein protein.
          Length = 220

 Score = 50.4 bits (115), Expect = 7e-06
 Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
 Frame = -1

Query: 745 NIEYTTANVMAKSDRDSINEYLKKNGRSMFDITFCFSVSMWIHLNNGDNGLREFLEHIKT 566
           N+ + T N +   DRD + E         +D+  C S++ W+HLN GD GL+     I  
Sbjct: 83  NVVFVTGNYVL--DRDDLVEAQTPE----YDVVLCLSLTKWVHLNWGDEGLKRMFRRIYR 136

Query: 565 ISKS---IIIEPQPWKCYRQAQKRIKKTGNTFQLYDNLKIRSQ 446
             +    +++EPQPW  Y    KR   T   ++ Y  ++++ +
Sbjct: 137 HLRPGGILVLEPQPWSSY---GKRKTLTETIYKNYYRIQLKPE 176


>BC000556-1|AAH00556.2|  689|Homo sapiens bin3, bicoid-interacting
           3, homolog (Drosophila) protein.
          Length = 689

 Score = 50.4 bits (115), Expect = 7e-06
 Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
 Frame = -1

Query: 745 NIEYTTANVMAKSDRDSINEYLKKNGRSMFDITFCFSVSMWIHLNNGDNGLREFLEHIKT 566
           N+ + T N +   DRD + E         +D+  C S++ W+HLN GD GL+     I  
Sbjct: 552 NVVFVTGNYVL--DRDDLVEAQTPE----YDVVLCLSLTKWVHLNWGDEGLKRMFRRIYR 605

Query: 565 ISKS---IIIEPQPWKCYRQAQKRIKKTGNTFQLYDNLKIRSQ 446
             +    +++EPQPW  Y    KR   T   ++ Y  ++++ +
Sbjct: 606 HLRPGGILVLEPQPWSSY---GKRKTLTETIYKNYYRIQLKPE 645


>AK000264-1|BAA91040.1|  220|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20257 fis, clone COLF7231. ).
          Length = 220

 Score = 50.4 bits (115), Expect = 7e-06
 Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
 Frame = -1

Query: 745 NIEYTTANVMAKSDRDSINEYLKKNGRSMFDITFCFSVSMWIHLNNGDNGLREFLEHIKT 566
           N+ + T N +   DRD + E         +D+  C S++ W+HLN GD GL+     I  
Sbjct: 83  NVVFVTGNYVL--DRDDLVEAQTPE----YDVVLCLSLTKWVHLNWGDEGLKRMFRRIYR 136

Query: 565 ISKS---IIIEPQPWKCYRQAQKRIKKTGNTFQLYDNLKIRSQ 446
             +    +++EPQPW  Y    KR   T   ++ Y  ++++ +
Sbjct: 137 HLRPGGILVLEPQPWSSY---GKRKTLTETIYKNYYRIQLKPE 176


>AF264752-1|AAF74767.1|  220|Homo sapiens unknown protein.
          Length = 220

 Score = 50.4 bits (115), Expect = 7e-06
 Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
 Frame = -1

Query: 745 NIEYTTANVMAKSDRDSINEYLKKNGRSMFDITFCFSVSMWIHLNNGDNGLREFLEHIKT 566
           N+ + T N +   DRD + E         +D+  C S++ W+HLN GD GL+     I  
Sbjct: 83  NVVFVTGNYVL--DRDDLVEAQTPE----YDVVLCLSLTKWVHLNWGDEGLKRMFRRIYR 136

Query: 565 ISKS---IIIEPQPWKCYRQAQKRIKKTGNTFQLYDNLKIRSQ 446
             +    +++EPQPW  Y    KR   T   ++ Y  ++++ +
Sbjct: 137 HLRPGGILVLEPQPWSSY---GKRKTLTETIYKNYYRIQLKPE 176


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,519,928
Number of Sequences: 237096
Number of extensions: 1884820
Number of successful extensions: 7327
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7316
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)