Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_N07
         (769 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL023828-21|CAA19466.1|  381|Caenorhabditis elegans Hypothetical...    43   3e-04
AL023828-20|CAA19465.1|  378|Caenorhabditis elegans Hypothetical...    43   3e-04
Z68106-5|CAA92129.1|  557|Caenorhabditis elegans Hypothetical pr...    29   2.8  
AL117202-23|CAB97239.2| 1428|Caenorhabditis elegans Hypothetical...    29   4.8  
AF047661-2|AAK71389.1|  886|Caenorhabditis elegans Hypothetical ...    28   8.4  
AF047661-1|AAK71388.2|  915|Caenorhabditis elegans Hypothetical ...    28   8.4  
AC006776-5|AAF60625.1|  358|Caenorhabditis elegans Serpentine re...    28   8.4  

>AL023828-21|CAA19466.1|  381|Caenorhabditis elegans Hypothetical
           protein Y17G7B.18b protein.
          Length = 381

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
 Frame = -1

Query: 658 FDITFCFSVSMWIHLNNGDNGLREFLEHIKT---ISKSIIIEPQPWKCYRQAQK 506
           FD+    S++ WIHLN GD+G+R F             +IIEPQ +  Y++  K
Sbjct: 260 FDVILALSITKWIHLNWGDDGMRRFFRRAYAQLHPGGRLIIEPQAFDSYKKRAK 313


>AL023828-20|CAA19465.1|  378|Caenorhabditis elegans Hypothetical
           protein Y17G7B.18a protein.
          Length = 378

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
 Frame = -1

Query: 658 FDITFCFSVSMWIHLNNGDNGLREFLEHIKT---ISKSIIIEPQPWKCYRQAQK 506
           FD+    S++ WIHLN GD+G+R F             +IIEPQ +  Y++  K
Sbjct: 257 FDVILALSITKWIHLNWGDDGMRRFFRRAYAQLHPGGRLIIEPQAFDSYKKRAK 310


>Z68106-5|CAA92129.1|  557|Caenorhabditis elegans Hypothetical
           protein F41E7.6 protein.
          Length = 557

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = -1

Query: 673 NGRSMFDITFCFSVSMWI-HLNNGDNGLREFLEHIKTISKSIII 545
           NG  +   +F F++S W+    NGD   RE LE+     K++I+
Sbjct: 512 NGNFLLSTSFTFTISNWLDDATNGDE-FRENLEYSLNFIKNVIL 554


>AL117202-23|CAB97239.2| 1428|Caenorhabditis elegans Hypothetical
            protein Y47D3A.29 protein.
          Length = 1428

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = -1

Query: 769  AQESNTXRNIEYTTANVMAKSDRDSINE-YLKKNGRSMFDITFCFSVSMWI 620
            AQ+      +EY    + +    D INE YL+KN  +  D+++ F+  M I
Sbjct: 1377 AQKKAAKVRVEYNGCKIDSMMLADRINEKYLEKNAYNRVDLSYIFAPMMKI 1427


>AF047661-2|AAK71389.1|  886|Caenorhabditis elegans Hypothetical
           protein M70.3b protein.
          Length = 886

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -1

Query: 592 REFLEHIKTISKSIIIEPQPWKCYRQAQKRIKKTGNTFQL 473
           +EF  +++ IS  I     P K  R A   IKK+ NT  L
Sbjct: 532 QEFFTNLEEISSEIAGSSSPIKSIRDAIANIKKSNNTEDL 571


>AF047661-1|AAK71388.2|  915|Caenorhabditis elegans Hypothetical
           protein M70.3a protein.
          Length = 915

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -1

Query: 592 REFLEHIKTISKSIIIEPQPWKCYRQAQKRIKKTGNTFQL 473
           +EF  +++ IS  I     P K  R A   IKK+ NT  L
Sbjct: 561 QEFFTNLEEISSEIAGSSSPIKSIRDAIANIKKSNNTEDL 600


>AC006776-5|AAF60625.1|  358|Caenorhabditis elegans Serpentine
           receptor, class w protein90 protein.
          Length = 358

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 13/45 (28%), Positives = 26/45 (57%)
 Frame = -1

Query: 727 ANVMAKSDRDSINEYLKKNGRSMFDITFCFSVSMWIHLNNGDNGL 593
           ++V  + +R S  +Y  K   + F I+F F++S ++H+ N   G+
Sbjct: 135 SDVTNRKNRYSTQKYGVKVTLTAFFISFAFTISFYLHVENVQIGV 179


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,325,316
Number of Sequences: 27780
Number of extensions: 340774
Number of successful extensions: 947
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)