Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_N01
         (716 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024757-4|AAK68429.2|  371|Caenorhabditis elegans Methionine am...    31   0.62 
Z71261-7|CAI70415.1|  570|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z71261-6|CAA95803.3|  578|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z68760-2|CAA92995.1|  597|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z70287-6|CAH04747.1|  443|Caenorhabditis elegans Hypothetical pr...    29   4.4  
U28971-5|AAA68379.1|  982|Caenorhabditis elegans Hypothetical pr...    28   5.8  
AL117205-8|CAB55167.1|  444|Caenorhabditis elegans Hypothetical ...    28   5.8  
U61944-5|AAB03121.2|  482|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>AC024757-4|AAK68429.2|  371|Caenorhabditis elegans Methionine
           aminopeptidase protein 1 protein.
          Length = 371

 Score = 31.5 bits (68), Expect = 0.62
 Identities = 22/82 (26%), Positives = 34/82 (41%)
 Frame = -2

Query: 367 TLIFGYAGIRIHLDRIEITRPQLPPETKEFKIKGIKYLGSSLSMHIQATSVTLTVSSVHD 188
           +++ GY G  IH  R+  T P +P   K     G+   G+S ++     + T       D
Sbjct: 268 SVVKGYCGHGIH--RLFHTAPNVPHYAKN-NATGVMKAGNSFTIEPMINAGTYHDDKWPD 324

Query: 187 QWPLVMNDGRYNVTLTPGMTVT 122
            W  V  DGR +      + VT
Sbjct: 325 DWTAVTRDGRRSAQFEQTLLVT 346


>Z71261-7|CAI70415.1|  570|Caenorhabditis elegans Hypothetical
           protein F21C3.4b protein.
          Length = 570

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
 Frame = -2

Query: 424 QSPQVGAVNFFTGMGGFLQT---LIFGYAGIRIHLDRIEITRPQLPPETKEFKIKGIKYL 254
           +SPQ+G V FF  +   ++T   LIF      I + +   T P    +   FK   ++  
Sbjct: 398 RSPQLGDVAFFDILPRRIETKDRLIFKIPYTHIAVKKKPDT-PDSLLKIDCFK-NSVRCF 455

Query: 253 GSSLSMHIQA--TSVTLTVSSVHDQWPLVMNDGRYNVTLTPGMTVTLPKD 110
           G  L M ++   +   L V   HD   +  +   Y +  T G+ VT+PK+
Sbjct: 456 GGVLEMKVKIALSKPELVVEQYHDNTEMNSDHHFYYLKATNGVLVTIPKE 505


>Z71261-6|CAA95803.3|  578|Caenorhabditis elegans Hypothetical
           protein F21C3.4a protein.
          Length = 578

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
 Frame = -2

Query: 424 QSPQVGAVNFFTGMGGFLQT---LIFGYAGIRIHLDRIEITRPQLPPETKEFKIKGIKYL 254
           +SPQ+G V FF  +   ++T   LIF      I + +   T P    +   FK   ++  
Sbjct: 406 RSPQLGDVAFFDILPRRIETKDRLIFKIPYTHIAVKKKPDT-PDSLLKIDCFK-NSVRCF 463

Query: 253 GSSLSMHIQA--TSVTLTVSSVHDQWPLVMNDGRYNVTLTPGMTVTLPKD 110
           G  L M ++   +   L V   HD   +  +   Y +  T G+ VT+PK+
Sbjct: 464 GGVLEMKVKIALSKPELVVEQYHDNTEMNSDHHFYYLKATNGVLVTIPKE 513


>Z68760-2|CAA92995.1|  597|Caenorhabditis elegans Hypothetical
           protein F36H1.3 protein.
          Length = 597

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -1

Query: 254 RIESVDAYPGDQRHADGVVGTRPVAV 177
           R+   D YPGD  HA+ V GT+P+ +
Sbjct: 223 RVILKDGYPGDYVHANYVKGTKPMFI 248


>Z70287-6|CAH04747.1|  443|Caenorhabditis elegans Hypothetical
           protein R09E10.9 protein.
          Length = 443

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -1

Query: 254 RIESVDAYPGDQRHADGVVGTRPVAV 177
           R+   D YPGD  HA+ + GT+P+ +
Sbjct: 95  RVILKDGYPGDYIHANYLKGTKPMLI 120


>U28971-5|AAA68379.1|  982|Caenorhabditis elegans Hypothetical
           protein B0244.6 protein.
          Length = 982

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -2

Query: 460 YVREPFKVWSELQSPQVGAVNFFTGMGGFLQTLI 359
           YV  P K  S++ SP VG +NF      FL T+I
Sbjct: 792 YVPGPIKCDSQVCSPIVGLINFIIVSFAFLITII 825


>AL117205-8|CAB55167.1|  444|Caenorhabditis elegans Hypothetical
           protein Y116A8A.9 protein.
          Length = 444

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 20/55 (36%), Positives = 27/55 (49%)
 Frame = -1

Query: 614 EYDDEKKRH*LL*ISYEEVWSSYDLEYACYRILGRRRQSKGWSHVQRELPEIRQR 450
           E ++EKK    L ISYEEVW  Y      +R +  R+  K W      + EI +R
Sbjct: 114 ESNEEKKA---LDISYEEVWQDYRRSAEAHRQV--RKYVKSWIKPGMTMIEICER 163


>U61944-5|AAB03121.2|  482|Caenorhabditis elegans Hypothetical
           protein T12E12.1 protein.
          Length = 482

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -2

Query: 634 YPLLYKMNTTTRKNDIDYYESVTRKSGPAMTWSM 533
           YP  Y ++ T RKN  +Y ++   K    + W++
Sbjct: 418 YPFAYFLSATPRKNLFEYQQAQLEKEVEELAWAV 451


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,811,002
Number of Sequences: 27780
Number of extensions: 369292
Number of successful extensions: 1037
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1037
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)