Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_M23
         (310 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y11119-1|CAA72004.1|  120|Drosophila melanogaster S20 ribosomal ...   181   2e-46
AY071742-1|AAL49364.1|  120|Drosophila melanogaster RH47995p pro...   181   2e-46
AE014297-2870|AAF55809.1|  120|Drosophila melanogaster CG15693-P...   181   2e-46
AY071353-1|AAL48975.1|  120|Drosophila melanogaster RE38972p pro...   179   6e-46

>Y11119-1|CAA72004.1|  120|Drosophila melanogaster S20 ribosomal
           protein protein.
          Length = 120

 Score =  181 bits (440), Expect = 2e-46
 Identities = 85/93 (91%), Positives = 87/93 (93%)
 Frame = -3

Query: 296 RITXTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRF 117
           RIT TSRNVRSLE VC DLINGAK Q LRVKGPVRMPTK LRITTRKTPCGEGSKTWDRF
Sbjct: 23  RITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRITTRKTPCGEGSKTWDRF 82

Query: 116 QMRIHKRVIDLHSPSEIVKQITSINIEPGVEVE 18
           QMRIHKR+IDLHSPSEIVK+ITSINIEPGVEVE
Sbjct: 83  QMRIHKRIIDLHSPSEIVKKITSINIEPGVEVE 115


>AY071742-1|AAL49364.1|  120|Drosophila melanogaster RH47995p
           protein.
          Length = 120

 Score =  181 bits (440), Expect = 2e-46
 Identities = 85/93 (91%), Positives = 87/93 (93%)
 Frame = -3

Query: 296 RITXTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRF 117
           RIT TSRNVRSLE VC DLINGAK Q LRVKGPVRMPTK LRITTRKTPCGEGSKTWDRF
Sbjct: 23  RITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRITTRKTPCGEGSKTWDRF 82

Query: 116 QMRIHKRVIDLHSPSEIVKQITSINIEPGVEVE 18
           QMRIHKR+IDLHSPSEIVK+ITSINIEPGVEVE
Sbjct: 83  QMRIHKRIIDLHSPSEIVKKITSINIEPGVEVE 115


>AE014297-2870|AAF55809.1|  120|Drosophila melanogaster CG15693-PA
           protein.
          Length = 120

 Score =  181 bits (440), Expect = 2e-46
 Identities = 85/93 (91%), Positives = 87/93 (93%)
 Frame = -3

Query: 296 RITXTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRF 117
           RIT TSRNVRSLE VC DLINGAK Q LRVKGPVRMPTK LRITTRKTPCGEGSKTWDRF
Sbjct: 23  RITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRITTRKTPCGEGSKTWDRF 82

Query: 116 QMRIHKRVIDLHSPSEIVKQITSINIEPGVEVE 18
           QMRIHKR+IDLHSPSEIVK+ITSINIEPGVEVE
Sbjct: 83  QMRIHKRIIDLHSPSEIVKKITSINIEPGVEVE 115


>AY071353-1|AAL48975.1|  120|Drosophila melanogaster RE38972p
           protein.
          Length = 120

 Score =  179 bits (436), Expect = 6e-46
 Identities = 84/93 (90%), Positives = 87/93 (93%)
 Frame = -3

Query: 296 RITXTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRF 117
           RIT TSRNVRSLE VC DLINGAK Q LRV+GPVRMPTK LRITTRKTPCGEGSKTWDRF
Sbjct: 23  RITLTSRNVRSLENVCRDLINGAKNQNLRVEGPVRMPTKTLRITTRKTPCGEGSKTWDRF 82

Query: 116 QMRIHKRVIDLHSPSEIVKQITSINIEPGVEVE 18
           QMRIHKR+IDLHSPSEIVK+ITSINIEPGVEVE
Sbjct: 83  QMRIHKRIIDLHSPSEIVKKITSINIEPGVEVE 115


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,912,475
Number of Sequences: 53049
Number of extensions: 298102
Number of successful extensions: 622
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 622
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 589756776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)